Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.52□□□□□ -2.01
HLA-DQA1Q5Y7H0 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.52□□□□□ -2.01
HLA-DQA1Q5Y7H0 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DQA1Q5Y7H0 FAM35CP-201ENST00000554755 2470 ntBASIC2.51□□□□□ -2.01
HLA-DQA1Q5Y7H0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DQA1Q5Y7H0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DQA1Q5Y7H0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
HLA-DQA1Q5Y7H0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DQA1Q5Y7H0 SNORA80A-201ENST00000363922 136 ntBASIC2.51□□□□□ -2.01
HLA-DQA1Q5Y7H0 SNORD115-28-201ENST00000363931 81 ntBASIC2.51□□□□□ -2.01
HLA-DQA1Q5Y7H0 Y_RNA.366-201ENST00000365540 102 ntBASIC2.51□□□□□ -2.01
HLA-DQA1Q5Y7H0 Y_RNA.528-201ENST00000384575 108 ntBASIC2.51□□□□□ -2.01
HLA-DQA1Q5Y7H0 MIR597-201ENST00000384968 97 ntBASIC2.51□□□□□ -2.01
HLA-DQA1Q5Y7H0 MIR9-1-201ENST00000385198 89 ntBASIC2.51□□□□□ -2.01
HLA-DQA1Q5Y7H0 MIR23A-201ENST00000385245 73 ntBASIC2.51□□□□□ -2.01
HLA-DQA1Q5Y7H0 CALM2P4-201ENST00000430810 426 ntBASIC2.51□□□□□ -2.01
HLA-DQA1Q5Y7H0 STAG3L5P-204ENST00000443759 179 ntBASIC2.51□□□□□ -2.01
HLA-DQA1Q5Y7H0 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.51□□□□□ -2.01
HLA-DQA1Q5Y7H0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.51□□□□□ -2.01
HLA-DQA1Q5Y7H0 MIR5094-201ENST00000578766 85 ntBASIC2.51□□□□□ -2.01
HLA-DQA1Q5Y7H0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DQA1Q5Y7H0 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.51□□□□□ -2.01
HLA-DQA1Q5Y7H0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.5□□□□□ -2.01
HLA-DQA1Q5Y7H0 Y_RNA.37-201ENST00000362606 108 ntBASIC2.5□□□□□ -2.01
HLA-DQA1Q5Y7H0 RNU1-112P-201ENST00000364401 164 ntBASIC2.5□□□□□ -2.01
HLA-DQA1Q5Y7H0 SNORA2.2-201ENST00000365473 135 ntBASIC2.5□□□□□ -2.01
HLA-DQA1Q5Y7H0 RNU6-1189P-201ENST00000383958 107 ntBASIC2.5□□□□□ -2.01
HLA-DQA1Q5Y7H0 MIR29C-201ENST00000385231 88 ntBASIC2.5□□□□□ -2.01
HLA-DQA1Q5Y7H0 RNU11-3P-201ENST00000391111 133 ntBASIC2.5□□□□□ -2.01
HLA-DQA1Q5Y7H0 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.5□□□□□ -2.01
HLA-DQA1Q5Y7H0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.5□□□□□ -2.01
HLA-DQA1Q5Y7H0 AC114811.1-201ENST00000507207 168 ntBASIC2.5□□□□□ -2.01
HLA-DQA1Q5Y7H0 SNORA31.10-201ENST00000516482 106 ntBASIC2.5□□□□□ -2.01
HLA-DQA1Q5Y7H0 SNORD36C-201ENST00000516733 66 ntBASIC2.5□□□□□ -2.01
HLA-DQA1Q5Y7H0 SNORA31.26-201ENST00000517250 137 ntBASIC2.5□□□□□ -2.01
HLA-DQA1Q5Y7H0 AL137067.1-201ENST00000615933 120 ntBASIC2.5□□□□□ -2.01
HLA-DQA1Q5Y7H0 RNU6-859P-201ENST00000362728 107 ntBASIC2.49□□□□□ -2.01
HLA-DQA1Q5Y7H0 RNU6-1019P-201ENST00000364424 107 ntBASIC2.49□□□□□ -2.01
HLA-DQA1Q5Y7H0 U8.9-201ENST00000365667 134 ntBASIC2.49□□□□□ -2.01
HLA-DQA1Q5Y7H0 RNU6-147P-201ENST00000383983 107 ntBASIC2.49□□□□□ -2.01
HLA-DQA1Q5Y7H0 Y_RNA.410-201ENST00000383992 113 ntBASIC2.49□□□□□ -2.01
HLA-DQA1Q5Y7H0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
HLA-DQA1Q5Y7H0 AL445646.1-201ENST00000431784 216 ntBASIC2.49□□□□□ -2.01
HLA-DQA1Q5Y7H0 SNORD109B-201ENST00000458961 67 ntBASIC2.49□□□□□ -2.01
HLA-DQA1Q5Y7H0 SNORD109A-201ENST00000459128 67 ntBASIC2.49□□□□□ -2.01
HLA-DQA1Q5Y7H0 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.49□□□□□ -2.01
HLA-DQA1Q5Y7H0 RNU6-240P-201ENST00000516098 97 ntBASIC2.49□□□□□ -2.01
HLA-DQA1Q5Y7H0 RNU6-113P-201ENST00000516653 101 ntBASIC2.49□□□□□ -2.01
HLA-DQA1Q5Y7H0 RNU7-28P-201ENST00000516759 62 ntBASIC2.49□□□□□ -2.01
HLA-DQA1Q5Y7H0 MIR3613-201ENST00000579844 87 ntBASIC2.49□□□□□ -2.01
HLA-DQA1Q5Y7H0 MIR4635-201ENST00000583759 79 ntBASIC2.49□□□□□ -2.01
HLA-DQA1Q5Y7H0 Y_RNA.336-201ENST00000365307 109 ntBASIC2.48□□□□□ -2.01
HLA-DQA1Q5Y7H0 MIR196B-201ENST00000384852 84 ntBASIC2.48□□□□□ -2.01
HLA-DQA1Q5Y7H0 RNU6-938P-201ENST00000411285 103 ntBASIC2.48□□□□□ -2.01
HLA-DQA1Q5Y7H0 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.48□□□□□ -2.01
HLA-DQA1Q5Y7H0 AC004486.1-201ENST00000546846 233 ntBASIC2.48□□□□□ -2.01
HLA-DQA1Q5Y7H0 AC079600.2-201ENST00000550076 130 ntBASIC2.48□□□□□ -2.01
HLA-DQA1Q5Y7H0 AC069114.2-201ENST00000604699 304 ntBASIC2.48□□□□□ -2.01
HLA-DQA1Q5Y7H0 AC015726.2-201ENST00000620112 122 ntBASIC2.48□□□□□ -2.01
HLA-DQA1Q5Y7H0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HLA-DQA1Q5Y7H0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HLA-DQA1Q5Y7H0 AC008555.8-201ENST00000623602 2168 ntBASIC2.47□□□□□ -2.01
HLA-DQA1Q5Y7H0 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
HLA-DQA1Q5Y7H0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.47□□□□□ -2.01
HLA-DQA1Q5Y7H0 RNU6-163P-201ENST00000384396 106 ntBASIC2.47□□□□□ -2.01
HLA-DQA1Q5Y7H0 RNU6-880P-201ENST00000384526 107 ntBASIC2.47□□□□□ -2.01
HLA-DQA1Q5Y7H0 RNA5SP184-201ENST00000411071 108 ntBASIC2.47□□□□□ -2.01
HLA-DQA1Q5Y7H0 HSPE1P9-201ENST00000440046 311 ntBASIC2.47□□□□□ -2.01
HLA-DQA1Q5Y7H0 RN7SKP132-201ENST00000516001 208 ntBASIC2.47□□□□□ -2.01
HLA-DQA1Q5Y7H0 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.47□□□□□ -2.01
HLA-DQA1Q5Y7H0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.47□□□□□ -2.01
HLA-DQA1Q5Y7H0 SCARNA15.3-201ENST00000626315 122 ntBASIC2.47□□□□□ -2.01
HLA-DQA1Q5Y7H0 SCARNA4.1-201ENST00000628597 123 ntBASIC2.47□□□□□ -2.01
HLA-DQA1Q5Y7H0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HLA-DQA1Q5Y7H0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
HLA-DQA1Q5Y7H0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.46□□□□□ -2.02
HLA-DQA1Q5Y7H0 MIRLET7C-201ENST00000362160 84 ntBASIC2.46□□□□□ -2.02
HLA-DQA1Q5Y7H0 SNORA38-201ENST00000363946 132 ntBASIC2.46□□□□□ -2.02
HLA-DQA1Q5Y7H0 SNORD56.5-201ENST00000364281 72 ntBASIC2.46□□□□□ -2.02
HLA-DQA1Q5Y7H0 MIR634-201ENST00000385208 97 ntBASIC2.46□□□□□ -2.02
HLA-DQA1Q5Y7H0 RNA5SP356-201ENST00000515972 94 ntBASIC2.46□□□□□ -2.02
HLA-DQA1Q5Y7H0 MIR4319-201ENST00000577285 85 ntBASIC2.46□□□□□ -2.02
HLA-DQA1Q5Y7H0 MIR4658-201ENST00000584344 65 ntBASIC2.46□□□□□ -2.02
HLA-DQA1Q5Y7H0 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
HLA-DQA1Q5Y7H0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DQA1Q5Y7H0 SNORA4.2-201ENST00000365313 147 ntBASIC2.45□□□□□ -2.02
HLA-DQA1Q5Y7H0 Y_RNA.440-201ENST00000384120 114 ntBASIC2.45□□□□□ -2.02
HLA-DQA1Q5Y7H0 MIR1283-2-201ENST00000408621 87 ntBASIC2.45□□□□□ -2.02
HLA-DQA1Q5Y7H0 HMGN2P3-201ENST00000433603 273 ntBASIC2.45□□□□□ -2.02
HLA-DQA1Q5Y7H0 HMGN2P5-201ENST00000436882 273 ntBASIC2.45□□□□□ -2.02
HLA-DQA1Q5Y7H0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DQA1Q5Y7H0 RPS26P48-201ENST00000491713 339 ntBASIC2.45□□□□□ -2.02
HLA-DQA1Q5Y7H0 AP003484.1-201ENST00000530974 250 ntBASIC2.45□□□□□ -2.02
HLA-DQA1Q5Y7H0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
HLA-DQA1Q5Y7H0 AC002984.1-201ENST00000591692 448 ntBASIC2.45□□□□□ -2.02
HLA-DQA1Q5Y7H0 AL033523.1-201ENST00000605153 153 ntBASIC2.45□□□□□ -2.02
HLA-DQA1Q5Y7H0 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DQA1Q5Y7H0 RNU6-349P-201ENST00000362402 107 ntBASIC2.44□□□□□ -2.02
HLA-DQA1Q5Y7H0 RNU6-1298P-201ENST00000362456 101 ntBASIC2.44□□□□□ -2.02
HLA-DQA1Q5Y7H0 RNA5SP136-201ENST00000410906 107 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 251.8 ms