Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
USPL1Q5W0Q7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.07□□□□□ -1.92
USPL1Q5W0Q7 RNU7-28P-201ENST00000516759 62 ntBASIC3.07□□□□□ -1.92
USPL1Q5W0Q7 DEFB122-202ENST00000569013 197 ntBASIC3.07□□□□□ -1.92
USPL1Q5W0Q7 MIR3169-201ENST00000578032 83 ntBASIC3.07□□□□□ -1.92
USPL1Q5W0Q7 AL591926.4-201ENST00000616895 298 ntBASIC3.07□□□□□ -1.92
USPL1Q5W0Q7 SNORA1B-201ENST00000362535 133 ntBASIC3.06□□□□□ -1.92
USPL1Q5W0Q7 RNU6-23P-201ENST00000363283 107 ntBASIC3.06□□□□□ -1.92
USPL1Q5W0Q7 RNA5SP456-201ENST00000364002 114 ntBASIC3.06□□□□□ -1.92
USPL1Q5W0Q7 U8.5-201ENST00000364528 136 ntBASIC3.06□□□□□ -1.92
USPL1Q5W0Q7 U8.9-201ENST00000365667 134 ntBASIC3.06□□□□□ -1.92
USPL1Q5W0Q7 MLLT10P1-201ENST00000418346 262 ntBASIC3.06□□□□□ -1.92
USPL1Q5W0Q7 AL163195.1-201ENST00000496941 348 ntBASIC3.06□□□□□ -1.92
USPL1Q5W0Q7 AC108210.2-201ENST00000503681 201 ntBASIC3.06□□□□□ -1.92
USPL1Q5W0Q7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.06□□□□□ -1.92
USPL1Q5W0Q7 RNU6-772P-201ENST00000516042 105 ntBASIC3.06□□□□□ -1.92
USPL1Q5W0Q7 AC005786.1-201ENST00000588553 154 ntBASIC3.06□□□□□ -1.92
USPL1Q5W0Q7 SNORD114-1-201ENST00000362705 72 ntBASIC3.05□□□□□ -1.92
USPL1Q5W0Q7 RNU6-862P-201ENST00000362804 105 ntBASIC3.05□□□□□ -1.92
USPL1Q5W0Q7 RNU6-1144P-201ENST00000384247 104 ntBASIC3.05□□□□□ -1.92
USPL1Q5W0Q7 RNU6-476P-201ENST00000384726 107 ntBASIC3.05□□□□□ -1.92
USPL1Q5W0Q7 AF228730.3-201ENST00000436691 102 ntBASIC3.05□□□□□ -1.92
USPL1Q5W0Q7 SNRPGP13-201ENST00000442212 177 ntBASIC3.05□□□□□ -1.92
USPL1Q5W0Q7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.05□□□□□ -1.92
USPL1Q5W0Q7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.05□□□□□ -1.92
USPL1Q5W0Q7 AC026436.1-201ENST00000510537 270 ntBASIC3.05□□□□□ -1.92
USPL1Q5W0Q7 CYCSP26-201ENST00000534107 320 ntBASIC3.05□□□□□ -1.92
USPL1Q5W0Q7 MIR5092-201ENST00000583139 88 ntBASIC3.05□□□□□ -1.92
USPL1Q5W0Q7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.05□□□□□ -1.92
USPL1Q5W0Q7 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.05□□□□□ -1.92
USPL1Q5W0Q7 AL161431.1-201ENST00000618966 4205 ntBASIC3.05□□□□□ -1.92
USPL1Q5W0Q7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
USPL1Q5W0Q7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.05□□□□□ -1.92
USPL1Q5W0Q7 RNU6-235P-201ENST00000362644 107 ntBASIC3.04□□□□□ -1.92
USPL1Q5W0Q7 SNORA33-201ENST00000363664 130 ntBASIC3.04□□□□□ -1.92
USPL1Q5W0Q7 RNU6-1164P-201ENST00000364428 107 ntBASIC3.04□□□□□ -1.92
USPL1Q5W0Q7 RNU1-91P-201ENST00000364746 163 ntBASIC3.04□□□□□ -1.92
USPL1Q5W0Q7 Y_RNA.294-201ENST00000364916 102 ntBASIC3.04□□□□□ -1.92
USPL1Q5W0Q7 SNORD61-201ENST00000384252 73 ntBASIC3.04□□□□□ -1.92
USPL1Q5W0Q7 SNORD72-201ENST00000390994 80 ntBASIC3.04□□□□□ -1.92
USPL1Q5W0Q7 RNA5SP482-201ENST00000391269 118 ntBASIC3.04□□□□□ -1.92
USPL1Q5W0Q7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.04□□□□□ -1.92
USPL1Q5W0Q7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.04□□□□□ -1.92
USPL1Q5W0Q7 RN7SL499P-201ENST00000481141 276 ntBASIC3.04□□□□□ -1.92
USPL1Q5W0Q7 RNU2-60P-201ENST00000517290 128 ntBASIC3.04□□□□□ -1.92
USPL1Q5W0Q7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.04□□□□□ -1.92
USPL1Q5W0Q7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
USPL1Q5W0Q7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
USPL1Q5W0Q7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
USPL1Q5W0Q7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
USPL1Q5W0Q7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.03□□□□□ -1.92
USPL1Q5W0Q7 RNA5SP99-201ENST00000364020 114 ntBASIC3.03□□□□□ -1.92
USPL1Q5W0Q7 MIR802-201ENST00000390235 94 ntBASIC3.03□□□□□ -1.92
USPL1Q5W0Q7 Y_RNA.617-201ENST00000410920 90 ntBASIC3.03□□□□□ -1.92
USPL1Q5W0Q7 AL603825.1-201ENST00000438481 80 ntBASIC3.03□□□□□ -1.92
USPL1Q5W0Q7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.03□□□□□ -1.92
USPL1Q5W0Q7 RNU7-26P-201ENST00000458980 63 ntBASIC3.03□□□□□ -1.92
USPL1Q5W0Q7 AC133485.4-201ENST00000561835 220 ntBASIC3.03□□□□□ -1.92
USPL1Q5W0Q7 AC138907.4-201ENST00000570107 226 ntBASIC3.03□□□□□ -1.92
USPL1Q5W0Q7 MIR3129-201ENST00000581095 76 ntBASIC3.03□□□□□ -1.92
USPL1Q5W0Q7 MIR1291-201ENST00000627649 87 ntBASIC3.03□□□□□ -1.92
USPL1Q5W0Q7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.03□□□□□ -1.92
USPL1Q5W0Q7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
USPL1Q5W0Q7 AC016717.2-201ENST00000609089 5141 ntBASIC3.02□□□□□ -1.93
USPL1Q5W0Q7 RNU6-442P-201ENST00000383968 104 ntBASIC3.02□□□□□ -1.93
USPL1Q5W0Q7 RPS12P2-201ENST00000439728 269 ntBASIC3.02□□□□□ -1.93
USPL1Q5W0Q7 RNU6-693P-201ENST00000516134 107 ntBASIC3.02□□□□□ -1.93
USPL1Q5W0Q7 RNU6-113P-201ENST00000516653 101 ntBASIC3.02□□□□□ -1.93
USPL1Q5W0Q7 AC006441.5-201ENST00000612680 209 ntBASIC3.02□□□□□ -1.93
USPL1Q5W0Q7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
USPL1Q5W0Q7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
USPL1Q5W0Q7 RNU1-58P-201ENST00000362413 163 ntBASIC3.01□□□□□ -1.93
USPL1Q5W0Q7 SNORA38-201ENST00000363946 132 ntBASIC3.01□□□□□ -1.93
USPL1Q5W0Q7 RNU6-44P-201ENST00000384045 107 ntBASIC3.01□□□□□ -1.93
USPL1Q5W0Q7 SNORA1-201ENST00000384107 130 ntBASIC3.01□□□□□ -1.93
USPL1Q5W0Q7 RNA5SP492-201ENST00000411330 114 ntBASIC3.01□□□□□ -1.93
USPL1Q5W0Q7 AC099677.2-201ENST00000436385 175 ntBASIC3.01□□□□□ -1.93
USPL1Q5W0Q7 AC069257.2-201ENST00000441819 155 ntBASIC3.01□□□□□ -1.93
USPL1Q5W0Q7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.01□□□□□ -1.93
USPL1Q5W0Q7 SNORD14E-201ENST00000364009 85 ntBASIC3□□□□□ -1.93
USPL1Q5W0Q7 SNORA25.6-201ENST00000364121 118 ntBASIC3□□□□□ -1.93
USPL1Q5W0Q7 snoU2-30.1-201ENST00000365012 70 ntBASIC3□□□□□ -1.93
USPL1Q5W0Q7 Y_RNA.336-201ENST00000365307 109 ntBASIC3□□□□□ -1.93
USPL1Q5W0Q7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3□□□□□ -1.93
USPL1Q5W0Q7 Y_RNA.666-201ENST00000516187 112 ntBASIC3□□□□□ -1.93
USPL1Q5W0Q7 RPPH1-2P-201ENST00000516688 293 ntBASIC3□□□□□ -1.93
USPL1Q5W0Q7 RNU6-1270P-201ENST00000517128 108 ntBASIC3□□□□□ -1.93
USPL1Q5W0Q7 AL022345.2-201ENST00000606307 135 ntBASIC3□□□□□ -1.93
USPL1Q5W0Q7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3□□□□□ -1.93
USPL1Q5W0Q7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
USPL1Q5W0Q7 AP006437.1-201ENST00000641440 3685 ntBASIC3□□□□□ -1.93
USPL1Q5W0Q7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
USPL1Q5W0Q7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.99□□□□□ -1.93
USPL1Q5W0Q7 SNORD68-201ENST00000363214 84 ntBASIC2.99□□□□□ -1.93
USPL1Q5W0Q7 RNU6-309P-201ENST00000364573 106 ntBASIC2.99□□□□□ -1.93
USPL1Q5W0Q7 SNORD58C-201ENST00000365223 64 ntBASIC2.99□□□□□ -1.93
USPL1Q5W0Q7 Y_RNA.410-201ENST00000383992 113 ntBASIC2.99□□□□□ -1.93
USPL1Q5W0Q7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
USPL1Q5W0Q7 RNU6-482P-201ENST00000391068 107 ntBASIC2.99□□□□□ -1.93
USPL1Q5W0Q7 AC245047.3-201ENST00000429428 127 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms