Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
NCBP3Q53F19 RNY1P13-201ENST00000365030 105 ntBASIC5.38□□□□□ -1.55
NCBP3Q53F19 Y_RNA.386-201ENST00000383913 105 ntBASIC5.38□□□□□ -1.55
NCBP3Q53F19 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC5.38□□□□□ -1.55
NCBP3Q53F19 FGF7P7-201ENST00000514120 227 ntBASIC5.38□□□□□ -1.55
NCBP3Q53F19 SNORA31.9-201ENST00000516429 84 ntBASIC5.38□□□□□ -1.55
NCBP3Q53F19 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC5.38□□□□□ -1.55
NCBP3Q53F19 SNORD14A-201ENST00000606526 91 ntBASIC5.38□□□□□ -1.55
NCBP3Q53F19 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NCBP3Q53F19 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
NCBP3Q53F19 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
NCBP3Q53F19 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
NCBP3Q53F19 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
NCBP3Q53F19 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NCBP3Q53F19 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NCBP3Q53F19 Y_RNA.205-201ENST00000364128 113 ntBASIC5.37□□□□□ -1.55
NCBP3Q53F19 Y_RNA.532-201ENST00000384590 113 ntBASIC5.37□□□□□ -1.55
NCBP3Q53F19 RNU4-83P-201ENST00000410863 133 ntBASIC5.37□□□□□ -1.55
NCBP3Q53F19 BX510359.1-201ENST00000456973 237 ntBASIC5.37□□□□□ -1.55
NCBP3Q53F19 RNU6-687P-201ENST00000516443 89 ntBASIC5.37□□□□□ -1.55
NCBP3Q53F19 RNU6-807P-201ENST00000516805 107 ntBASIC5.37□□□□□ -1.55
NCBP3Q53F19 AP000753.3-201ENST00000604083 169 ntBASIC5.37□□□□□ -1.55
NCBP3Q53F19 LINC02471-203ENST00000641941 4752 ntBASIC5.37□□□□□ -1.55
NCBP3Q53F19 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
NCBP3Q53F19 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NCBP3Q53F19 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NCBP3Q53F19 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
NCBP3Q53F19 MIR635-201ENST00000384830 98 ntBASIC5.36□□□□□ -1.55
NCBP3Q53F19 RNU2-59P-201ENST00000410482 191 ntBASIC5.36□□□□□ -1.55
NCBP3Q53F19 AL356095.1-201ENST00000417217 199 ntBASIC5.36□□□□□ -1.55
NCBP3Q53F19 AC083863.1-201ENST00000438811 231 ntBASIC5.36□□□□□ -1.55
NCBP3Q53F19 CYP3A52P-201ENST00000563326 91 ntBASIC5.36□□□□□ -1.55
NCBP3Q53F19 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
NCBP3Q53F19 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC5.35□□□□□ -1.55
NCBP3Q53F19 RNU6-283P-201ENST00000364788 107 ntBASIC5.35□□□□□ -1.55
NCBP3Q53F19 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
NCBP3Q53F19 Z96811.1-201ENST00000445880 108 ntBASIC5.35□□□□□ -1.55
NCBP3Q53F19 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC5.35□□□□□ -1.55
NCBP3Q53F19 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC5.35□□□□□ -1.55
NCBP3Q53F19 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NCBP3Q53F19 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NCBP3Q53F19 RNU1-109P-201ENST00000383960 147 ntBASIC5.34□□□□□ -1.55
NCBP3Q53F19 MIR627-201ENST00000384979 97 ntBASIC5.34□□□□□ -1.55
NCBP3Q53F19 SNORA3C-201ENST00000408792 125 ntBASIC5.34□□□□□ -1.55
NCBP3Q53F19 AC090897.1-201ENST00000580909 226 ntBASIC5.34□□□□□ -1.55
NCBP3Q53F19 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.34□□□□□ -1.55
NCBP3Q53F19 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
NCBP3Q53F19 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
NCBP3Q53F19 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NCBP3Q53F19 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.33□□□□□ -1.56
NCBP3Q53F19 AC027119.1-201ENST00000440877 241 ntBASIC5.33□□□□□ -1.56
NCBP3Q53F19 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
NCBP3Q53F19 RPL29P14-201ENST00000495837 428 ntBASIC5.33□□□□□ -1.56
NCBP3Q53F19 MRPL49P2-201ENST00000521066 465 ntBASIC5.33□□□□□ -1.56
NCBP3Q53F19 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.33□□□□□ -1.56
NCBP3Q53F19 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NCBP3Q53F19 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NCBP3Q53F19 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NCBP3Q53F19 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NCBP3Q53F19 SNORA70C-201ENST00000384538 135 ntBASIC5.32□□□□□ -1.56
NCBP3Q53F19 SNORD30.1-201ENST00000391309 70 ntBASIC5.32□□□□□ -1.56
NCBP3Q53F19 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC5.32□□□□□ -1.56
NCBP3Q53F19 MIR4727-201ENST00000622232 55 ntBASIC5.32□□□□□ -1.56
NCBP3Q53F19 RNA5SP196-201ENST00000625967 102 ntBASIC5.32□□□□□ -1.56
NCBP3Q53F19 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
NCBP3Q53F19 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NCBP3Q53F19 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NCBP3Q53F19 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NCBP3Q53F19 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.31□□□□□ -1.56
NCBP3Q53F19 Y_RNA.648-201ENST00000459455 110 ntBASIC5.31□□□□□ -1.56
NCBP3Q53F19 ZYXP1-201ENST00000617638 118 ntBASIC5.31□□□□□ -1.56
NCBP3Q53F19 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NCBP3Q53F19 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NCBP3Q53F19 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC5.31□□□□□ -1.56
NCBP3Q53F19 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
NCBP3Q53F19 RNU1-58P-201ENST00000362413 163 ntBASIC5.3□□□□□ -1.56
NCBP3Q53F19 RNU6-811P-201ENST00000384069 107 ntBASIC5.3□□□□□ -1.56
NCBP3Q53F19 RNU4ATAC6P-201ENST00000516592 126 ntBASIC5.3□□□□□ -1.56
NCBP3Q53F19 AC026271.5-201ENST00000577873 130 ntBASIC5.3□□□□□ -1.56
NCBP3Q53F19 MIR664A-201ENST00000626086 82 ntBASIC5.3□□□□□ -1.56
NCBP3Q53F19 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
NCBP3Q53F19 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NCBP3Q53F19 SNORD74.4-201ENST00000364129 80 ntBASIC5.29□□□□□ -1.56
NCBP3Q53F19 RNU6-987P-201ENST00000384759 104 ntBASIC5.29□□□□□ -1.56
NCBP3Q53F19 RNA5SP292-201ENST00000390974 118 ntBASIC5.29□□□□□ -1.56
NCBP3Q53F19 RPS26P8-201ENST00000393490 348 ntBASIC5.29□□□□□ -1.56
NCBP3Q53F19 RNA5SP237-201ENST00000410414 113 ntBASIC5.29□□□□□ -1.56
NCBP3Q53F19 AC104332.2-201ENST00000429959 156 ntBASIC5.29□□□□□ -1.56
NCBP3Q53F19 MIR3160-1-201ENST00000577972 85 ntBASIC5.29□□□□□ -1.56
NCBP3Q53F19 MIR1297-201ENST00000637311 77 ntBASIC5.29□□□□□ -1.56
NCBP3Q53F19 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
NCBP3Q53F19 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NCBP3Q53F19 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.28□□□□□ -1.56
NCBP3Q53F19 MIR513A2-201ENST00000385249 127 ntBASIC5.28□□□□□ -1.56
NCBP3Q53F19 SNORA57.1-201ENST00000391227 145 ntBASIC5.28□□□□□ -1.56
NCBP3Q53F19 Z98941.1-201ENST00000407764 100 ntBASIC5.28□□□□□ -1.56
NCBP3Q53F19 AC004552.1-201ENST00000419089 348 ntBASIC5.28□□□□□ -1.56
NCBP3Q53F19 RPS26P3-201ENST00000470205 348 ntBASIC5.28□□□□□ -1.56
NCBP3Q53F19 AC023790.1-201ENST00000482174 347 ntBASIC5.28□□□□□ -1.56
NCBP3Q53F19 AC090543.2-201ENST00000483963 348 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms