Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AL049830.1-201ENST00000468034 425 ntBASIC3.61□□□□□ -1.83
CTC1Q2NKJ3 UBL5P1-201ENST00000507979 193 ntBASIC3.61□□□□□ -1.83
CTC1Q2NKJ3 RNA5SP33-201ENST00000516687 98 ntBASIC3.61□□□□□ -1.83
CTC1Q2NKJ3 SCARNA11.3-201ENST00000517276 130 ntBASIC3.61□□□□□ -1.83
CTC1Q2NKJ3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.61□□□□□ -1.83
CTC1Q2NKJ3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.61□□□□□ -1.83
CTC1Q2NKJ3 MIR3134-201ENST00000579433 74 ntBASIC3.61□□□□□ -1.83
CTC1Q2NKJ3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.61□□□□□ -1.83
CTC1Q2NKJ3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.61□□□□□ -1.83
CTC1Q2NKJ3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.61□□□□□ -1.83
CTC1Q2NKJ3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.61□□□□□ -1.83
CTC1Q2NKJ3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CTC1Q2NKJ3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CTC1Q2NKJ3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CTC1Q2NKJ3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CTC1Q2NKJ3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.61□□□□□ -1.83
CTC1Q2NKJ3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CTC1Q2NKJ3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CTC1Q2NKJ3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CTC1Q2NKJ3 MIR422A-201ENST00000362286 90 ntBASIC3.6□□□□□ -1.83
CTC1Q2NKJ3 RNU6-1094P-201ENST00000362416 104 ntBASIC3.6□□□□□ -1.83
CTC1Q2NKJ3 SNORA1B-201ENST00000362535 133 ntBASIC3.6□□□□□ -1.83
CTC1Q2NKJ3 RNU6-129P-201ENST00000391022 107 ntBASIC3.6□□□□□ -1.83
CTC1Q2NKJ3 AC107083.1-201ENST00000439643 279 ntBASIC3.6□□□□□ -1.83
CTC1Q2NKJ3 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.6□□□□□ -1.83
CTC1Q2NKJ3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.6□□□□□ -1.83
CTC1Q2NKJ3 RPL12P50-201ENST00000603116 116 ntBASIC3.6□□□□□ -1.83
CTC1Q2NKJ3 AC006023.1-201ENST00000603944 259 ntBASIC3.6□□□□□ -1.83
CTC1Q2NKJ3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CTC1Q2NKJ3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
CTC1Q2NKJ3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.59□□□□□ -1.83
CTC1Q2NKJ3 Y_RNA.140-201ENST00000363474 103 ntBASIC3.59□□□□□ -1.83
CTC1Q2NKJ3 snoU2-30.1-201ENST00000365012 70 ntBASIC3.59□□□□□ -1.83
CTC1Q2NKJ3 RNA5SP126-201ENST00000365092 109 ntBASIC3.59□□□□□ -1.83
CTC1Q2NKJ3 SNORA27-201ENST00000384323 126 ntBASIC3.59□□□□□ -1.83
CTC1Q2NKJ3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CTC1Q2NKJ3 MTND4LP19-201ENST00000403051 166 ntBASIC3.59□□□□□ -1.83
CTC1Q2NKJ3 RN7SL594P-201ENST00000470590 287 ntBASIC3.59□□□□□ -1.83
CTC1Q2NKJ3 SNORA4.4-201ENST00000515921 135 ntBASIC3.59□□□□□ -1.83
CTC1Q2NKJ3 SCARNA3-201ENST00000517097 143 ntBASIC3.59□□□□□ -1.83
CTC1Q2NKJ3 MIR1248-201ENST00000629190 106 ntBASIC3.59□□□□□ -1.83
CTC1Q2NKJ3 AC110079.1-202ENST00000635213 138 ntBASIC3.59□□□□□ -1.83
CTC1Q2NKJ3 AC096644.4-201ENST00000563417 2912 ntBASIC3.59□□□□□ -1.84
CTC1Q2NKJ3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTC1Q2NKJ3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.58□□□□□ -1.84
CTC1Q2NKJ3 Y_RNA.241-201ENST00000364470 117 ntBASIC3.58□□□□□ -1.84
CTC1Q2NKJ3 RNA5SP467-201ENST00000391274 118 ntBASIC3.58□□□□□ -1.84
CTC1Q2NKJ3 AC060773.1-201ENST00000421698 310 ntBASIC3.58□□□□□ -1.84
CTC1Q2NKJ3 AL450471.1-201ENST00000447509 127 ntBASIC3.58□□□□□ -1.84
CTC1Q2NKJ3 RN7SL442P-201ENST00000473804 320 ntBASIC3.58□□□□□ -1.84
CTC1Q2NKJ3 RNU6-998P-201ENST00000515894 101 ntBASIC3.58□□□□□ -1.84
CTC1Q2NKJ3 RNU7-153P-201ENST00000516455 62 ntBASIC3.58□□□□□ -1.84
CTC1Q2NKJ3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.58□□□□□ -1.84
CTC1Q2NKJ3 ZNF861P-201ENST00000588126 639 ntBASIC3.58□□□□□ -1.84
CTC1Q2NKJ3 MIR7106-201ENST00000612419 65 ntBASIC3.58□□□□□ -1.84
CTC1Q2NKJ3 AC022149.2-201ENST00000621061 203 ntBASIC3.58□□□□□ -1.84
CTC1Q2NKJ3 MIR7153-201ENST00000637758 57 ntBASIC3.58□□□□□ -1.84
CTC1Q2NKJ3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CTC1Q2NKJ3 GABRG2-229ENST00000641017 3628 ntBASIC3.58□□□□□ -1.84
CTC1Q2NKJ3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTC1Q2NKJ3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CTC1Q2NKJ3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CTC1Q2NKJ3 RNU11-5P-201ENST00000391216 129 ntBASIC3.57□□□□□ -1.84
CTC1Q2NKJ3 RNU6-613P-201ENST00000410412 108 ntBASIC3.57□□□□□ -1.84
CTC1Q2NKJ3 RNA5SP293-201ENST00000410527 113 ntBASIC3.57□□□□□ -1.84
CTC1Q2NKJ3 SCARNA18B-201ENST00000458806 135 ntBASIC3.57□□□□□ -1.84
CTC1Q2NKJ3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CTC1Q2NKJ3 SNORD45.4-201ENST00000516629 73 ntBASIC3.57□□□□□ -1.84
CTC1Q2NKJ3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.57□□□□□ -1.84
CTC1Q2NKJ3 AL358944.1-201ENST00000528537 144 ntBASIC3.57□□□□□ -1.84
CTC1Q2NKJ3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.57□□□□□ -1.84
CTC1Q2NKJ3 AL353149.1-201ENST00000610667 244 ntBASIC3.57□□□□□ -1.84
CTC1Q2NKJ3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CTC1Q2NKJ3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CTC1Q2NKJ3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.56□□□□□ -1.84
CTC1Q2NKJ3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CTC1Q2NKJ3 RNU6-1244P-201ENST00000363614 108 ntBASIC3.56□□□□□ -1.84
CTC1Q2NKJ3 SNORA32-201ENST00000384072 121 ntBASIC3.56□□□□□ -1.84
CTC1Q2NKJ3 Y_RNA.494-201ENST00000384432 111 ntBASIC3.56□□□□□ -1.84
CTC1Q2NKJ3 AL135938.1-201ENST00000443141 297 ntBASIC3.56□□□□□ -1.84
CTC1Q2NKJ3 AL109933.2-201ENST00000452651 260 ntBASIC3.56□□□□□ -1.84
CTC1Q2NKJ3 MIR2276-201ENST00000516886 89 ntBASIC3.56□□□□□ -1.84
CTC1Q2NKJ3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.56□□□□□ -1.84
CTC1Q2NKJ3 MIR7157-201ENST00000635801 60 ntBASIC3.56□□□□□ -1.84
CTC1Q2NKJ3 AL355596.1-201ENST00000565399 3996 ntBASIC3.56□□□□□ -1.84
CTC1Q2NKJ3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CTC1Q2NKJ3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CTC1Q2NKJ3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CTC1Q2NKJ3 RNU4-32P-201ENST00000363404 141 ntBASIC3.55□□□□□ -1.84
CTC1Q2NKJ3 SNORA5B-201ENST00000363786 132 ntBASIC3.55□□□□□ -1.84
CTC1Q2NKJ3 RNU1-98P-201ENST00000458992 160 ntBASIC3.55□□□□□ -1.84
CTC1Q2NKJ3 RNU7-96P-201ENST00000459535 64 ntBASIC3.55□□□□□ -1.84
CTC1Q2NKJ3 SCARNA17.1-201ENST00000516211 143 ntBASIC3.55□□□□□ -1.84
CTC1Q2NKJ3 SCARNA17.2-201ENST00000516334 143 ntBASIC3.55□□□□□ -1.84
CTC1Q2NKJ3 RNU6-856P-201ENST00000516959 98 ntBASIC3.55□□□□□ -1.84
CTC1Q2NKJ3 RNU6-586P-201ENST00000517265 104 ntBASIC3.55□□□□□ -1.84
CTC1Q2NKJ3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CTC1Q2NKJ3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CTC1Q2NKJ3 SCARNA17.4-201ENST00000614296 143 ntBASIC3.55□□□□□ -1.84
CTC1Q2NKJ3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms