Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.68□□□□□ -2.14
PDS5AQ29RF7 AC068700.1-201ENST00000565862 3754 ntBASIC1.68□□□□□ -2.14
PDS5AQ29RF7 Y_RNA.267-201ENST00000364679 109 ntBASIC1.67□□□□□ -2.14
PDS5AQ29RF7 Y_RNA.552-201ENST00000384665 112 ntBASIC1.67□□□□□ -2.14
PDS5AQ29RF7 RNU6-847P-201ENST00000411115 108 ntBASIC1.67□□□□□ -2.14
PDS5AQ29RF7 AC009310.1-201ENST00000414414 451 ntBASIC1.67□□□□□ -2.14
PDS5AQ29RF7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.67□□□□□ -2.14
PDS5AQ29RF7 AC009779.6-201ENST00000603972 165 ntBASIC1.67□□□□□ -2.14
PDS5AQ29RF7 MIR8054-201ENST00000620877 86 ntBASIC1.67□□□□□ -2.14
PDS5AQ29RF7 RNU6-1205P-201ENST00000363625 106 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 Y_RNA.304-201ENST00000365011 112 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 RNU6-440P-201ENST00000390882 105 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 RNU6-360P-201ENST00000390944 104 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.66□□□□□ -2.14
PDS5AQ29RF7 RNU2-7P-201ENST00000410794 178 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 AC244636.1-201ENST00000421152 228 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 AC245047.3-201ENST00000429428 127 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 RPL23AP54-201ENST00000495129 419 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 SNORD116-28-201ENST00000516123 91 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 RNU6-1291P-201ENST00000516591 104 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 RNA5SP481-201ENST00000516814 122 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 RNU1-92P-201ENST00000517017 135 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 AP002004.2-201ENST00000531656 154 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 AC078938.1-201ENST00000620993 318 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 AL365265.1-201ENST00000621045 234 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 SNORA1B-201ENST00000362535 133 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 Y_RNA.257-201ENST00000364596 102 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 RNU6-950P-201ENST00000384651 107 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
PDS5AQ29RF7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.66□□□□□ -2.14
PDS5AQ29RF7 AC233266.1-201ENST00000454518 96 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 RNU6-437P-201ENST00000459408 95 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 AL049830.1-201ENST00000468034 425 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 TRMT112P2-201ENST00000512910 132 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 SNORA31.10-201ENST00000516482 106 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 RNU7-28P-201ENST00000516759 62 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 RNA5SP437-201ENST00000517249 129 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 RNU6-794P-201ENST00000517261 64 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 AL929325.1-201ENST00000603096 117 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 AC242852.1-201ENST00000612151 96 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 AC244015.1-201ENST00000622301 99 ntBASIC1.66□□□□□ -2.14
PDS5AQ29RF7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
PDS5AQ29RF7 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.65□□□□□ -2.15
PDS5AQ29RF7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.65□□□□□ -2.15
PDS5AQ29RF7 RNU6-653P-201ENST00000363074 106 ntBASIC1.65□□□□□ -2.15
PDS5AQ29RF7 RNU6-1080P-201ENST00000383982 107 ntBASIC1.65□□□□□ -2.15
PDS5AQ29RF7 Y_RNA.515-201ENST00000384535 112 ntBASIC1.65□□□□□ -2.15
PDS5AQ29RF7 MIR626-201ENST00000385032 94 ntBASIC1.65□□□□□ -2.15
PDS5AQ29RF7 MIR526A2-201ENST00000390198 65 ntBASIC1.65□□□□□ -2.15
PDS5AQ29RF7 RN7SKP200-201ENST00000410564 320 ntBASIC1.65□□□□□ -2.15
PDS5AQ29RF7 Y_RNA.626-201ENST00000411288 95 ntBASIC1.65□□□□□ -2.15
PDS5AQ29RF7 SNRPGP13-201ENST00000442212 177 ntBASIC1.65□□□□□ -2.15
PDS5AQ29RF7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.65□□□□□ -2.15
PDS5AQ29RF7 SNORA31.17-201ENST00000516953 127 ntBASIC1.65□□□□□ -2.15
PDS5AQ29RF7 MIR4781-201ENST00000585250 76 ntBASIC1.65□□□□□ -2.15
PDS5AQ29RF7 AL353770.2-201ENST00000620024 78 ntBASIC1.65□□□□□ -2.15
PDS5AQ29RF7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
PDS5AQ29RF7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
PDS5AQ29RF7 Y_RNA.203-201ENST00000364106 102 ntBASIC1.64□□□□□ -2.15
PDS5AQ29RF7 Y_RNA.262-201ENST00000364641 102 ntBASIC1.64□□□□□ -2.15
PDS5AQ29RF7 Y_RNA.293-201ENST00000364908 93 ntBASIC1.64□□□□□ -2.15
PDS5AQ29RF7 Y_RNA.327-201ENST00000365201 102 ntBASIC1.64□□□□□ -2.15
PDS5AQ29RF7 HSPE1P9-201ENST00000440046 311 ntBASIC1.64□□□□□ -2.15
PDS5AQ29RF7 Z98949.2-201ENST00000440996 144 ntBASIC1.64□□□□□ -2.15
PDS5AQ29RF7 RPL23AP6-201ENST00000446637 472 ntBASIC1.64□□□□□ -2.15
PDS5AQ29RF7 RNU1-123P-201ENST00000458950 160 ntBASIC1.64□□□□□ -2.15
PDS5AQ29RF7 AC004223.1-201ENST00000479840 271 ntBASIC1.64□□□□□ -2.15
PDS5AQ29RF7 AC023790.1-201ENST00000482174 347 ntBASIC1.64□□□□□ -2.15
PDS5AQ29RF7 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.64□□□□□ -2.15
PDS5AQ29RF7 AC022254.1-201ENST00000567857 235 ntBASIC1.64□□□□□ -2.15
PDS5AQ29RF7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.64□□□□□ -2.15
PDS5AQ29RF7 MIR2681-201ENST00000581814 105 ntBASIC1.64□□□□□ -2.15
PDS5AQ29RF7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.64□□□□□ -2.15
PDS5AQ29RF7 Y_RNA.802-201ENST00000614892 130 ntBASIC1.64□□□□□ -2.15
PDS5AQ29RF7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.64□□□□□ -2.15
PDS5AQ29RF7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
PDS5AQ29RF7 Y_RNA.199-201ENST00000364014 102 ntBASIC1.63□□□□□ -2.15
PDS5AQ29RF7 Y_RNA.200-201ENST00000364018 102 ntBASIC1.63□□□□□ -2.15
PDS5AQ29RF7 SNORA4.2-201ENST00000365313 147 ntBASIC1.63□□□□□ -2.15
PDS5AQ29RF7 SNORA8.3-201ENST00000384679 139 ntBASIC1.63□□□□□ -2.15
PDS5AQ29RF7 MIR1298-201ENST00000408783 112 ntBASIC1.63□□□□□ -2.15
PDS5AQ29RF7 Y_RNA.621-201ENST00000411065 96 ntBASIC1.63□□□□□ -2.15
PDS5AQ29RF7 RNA5SP247-201ENST00000411181 105 ntBASIC1.63□□□□□ -2.15
PDS5AQ29RF7 AC108059.2-201ENST00000434626 151 ntBASIC1.63□□□□□ -2.15
PDS5AQ29RF7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.63□□□□□ -2.15
PDS5AQ29RF7 RPS29P29-201ENST00000456396 171 ntBASIC1.63□□□□□ -2.15
PDS5AQ29RF7 RNA5SP57-201ENST00000459463 123 ntBASIC1.63□□□□□ -2.15
PDS5AQ29RF7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.63□□□□□ -2.15
PDS5AQ29RF7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.63□□□□□ -2.15
PDS5AQ29RF7 RNU2-56P-201ENST00000516826 190 ntBASIC1.63□□□□□ -2.15
PDS5AQ29RF7 AC100767.1-201ENST00000528178 123 ntBASIC1.63□□□□□ -2.15
PDS5AQ29RF7 AC130289.1-201ENST00000577321 73 ntBASIC1.63□□□□□ -2.15
PDS5AQ29RF7 MIR4724-201ENST00000579485 89 ntBASIC1.63□□□□□ -2.15
PDS5AQ29RF7 SNORA28-201ENST00000606769 126 ntBASIC1.63□□□□□ -2.15
PDS5AQ29RF7 RNU4-41P-201ENST00000364426 143 ntBASIC1.62□□□□□ -2.15
PDS5AQ29RF7 RNU6-1318P-201ENST00000365389 103 ntBASIC1.62□□□□□ -2.15
PDS5AQ29RF7 SNORA40.6-201ENST00000391153 128 ntBASIC1.62□□□□□ -2.15
PDS5AQ29RF7 RNA5SP496-201ENST00000391240 109 ntBASIC1.62□□□□□ -2.15
PDS5AQ29RF7 RNA5SP482-201ENST00000391269 118 ntBASIC1.62□□□□□ -2.15
PDS5AQ29RF7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms