Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 Y_RNA.253-201ENST00000364562 112 ntBASIC2.24□□□□□ -2.05
ATP2B3Q16720 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
ATP2B3Q16720 SNORA12.1-201ENST00000390873 148 ntBASIC2.24□□□□□ -2.05
ATP2B3Q16720 RNU6-578P-201ENST00000390980 103 ntBASIC2.24□□□□□ -2.05
ATP2B3Q16720 RNA5SP450-201ENST00000411206 102 ntBASIC2.24□□□□□ -2.05
ATP2B3Q16720 AC245047.3-201ENST00000429428 127 ntBASIC2.24□□□□□ -2.05
ATP2B3Q16720 AC069114.2-201ENST00000604699 304 ntBASIC2.24□□□□□ -2.05
ATP2B3Q16720 AL021707.8-201ENST00000609428 183 ntBASIC2.24□□□□□ -2.05
ATP2B3Q16720 U1.36-201ENST00000620684 176 ntBASIC2.24□□□□□ -2.05
ATP2B3Q16720 AC084768.2-201ENST00000622736 221 ntBASIC2.24□□□□□ -2.05
ATP2B3Q16720 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
ATP2B3Q16720 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
ATP2B3Q16720 SNORA4.2-201ENST00000365313 147 ntBASIC2.23□□□□□ -2.05
ATP2B3Q16720 RNU6-1062P-201ENST00000383908 107 ntBASIC2.23□□□□□ -2.05
ATP2B3Q16720 AL512604.1-201ENST00000404812 257 ntBASIC2.23□□□□□ -2.05
ATP2B3Q16720 RNU6-1135P-201ENST00000411083 103 ntBASIC2.23□□□□□ -2.05
ATP2B3Q16720 HSPE1P9-201ENST00000440046 311 ntBASIC2.23□□□□□ -2.05
ATP2B3Q16720 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.23□□□□□ -2.05
ATP2B3Q16720 RNU6-341P-201ENST00000516973 96 ntBASIC2.23□□□□□ -2.05
ATP2B3Q16720 MTND5P41-201ENST00000517498 206 ntBASIC2.23□□□□□ -2.05
ATP2B3Q16720 AC024995.1-201ENST00000523014 93 ntBASIC2.23□□□□□ -2.05
ATP2B3Q16720 AC109810.1-201ENST00000534066 224 ntBASIC2.23□□□□□ -2.05
ATP2B3Q16720 AL365434.2-201ENST00000607979 234 ntBASIC2.23□□□□□ -2.05
ATP2B3Q16720 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
ATP2B3Q16720 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.23□□□□□ -2.05
ATP2B3Q16720 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
ATP2B3Q16720 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
ATP2B3Q16720 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
ATP2B3Q16720 RNU6-275P-201ENST00000364910 107 ntBASIC2.22□□□□□ -2.05
ATP2B3Q16720 MIR515-2-201ENST00000384883 83 ntBASIC2.22□□□□□ -2.05
ATP2B3Q16720 MIR515-1-201ENST00000384884 83 ntBASIC2.22□□□□□ -2.05
ATP2B3Q16720 MLLT10P1-201ENST00000418346 262 ntBASIC2.22□□□□□ -2.05
ATP2B3Q16720 SNORD11-201ENST00000459124 84 ntBASIC2.22□□□□□ -2.05
ATP2B3Q16720 SNORA31.10-201ENST00000516482 106 ntBASIC2.22□□□□□ -2.05
ATP2B3Q16720 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.22□□□□□ -2.05
ATP2B3Q16720 AL591926.4-201ENST00000616895 298 ntBASIC2.22□□□□□ -2.05
ATP2B3Q16720 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
ATP2B3Q16720 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
ATP2B3Q16720 Y_RNA.75-201ENST00000362927 97 ntBASIC2.21□□□□□ -2.06
ATP2B3Q16720 Y_RNA.121-201ENST00000363309 113 ntBASIC2.21□□□□□ -2.06
ATP2B3Q16720 RNU6-818P-201ENST00000364837 108 ntBASIC2.21□□□□□ -2.06
ATP2B3Q16720 RNU6-1130P-201ENST00000365434 107 ntBASIC2.21□□□□□ -2.06
ATP2B3Q16720 MIR17-201ENST00000385012 84 ntBASIC2.21□□□□□ -2.06
ATP2B3Q16720 RN7SKP101-201ENST00000411376 320 ntBASIC2.21□□□□□ -2.06
ATP2B3Q16720 HMGN2P19-201ENST00000425149 265 ntBASIC2.21□□□□□ -2.06
ATP2B3Q16720 AL121914.1-201ENST00000450188 156 ntBASIC2.21□□□□□ -2.06
ATP2B3Q16720 RNA5SP233-201ENST00000459153 113 ntBASIC2.21□□□□□ -2.06
ATP2B3Q16720 NDUFA4P2-201ENST00000489989 244 ntBASIC2.21□□□□□ -2.06
ATP2B3Q16720 RNA5SP437-201ENST00000517249 129 ntBASIC2.21□□□□□ -2.06
ATP2B3Q16720 AL391903.3-201ENST00000612158 163 ntBASIC2.21□□□□□ -2.06
ATP2B3Q16720 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
ATP2B3Q16720 ICE2P2-201ENST00000483823 2787 ntBASIC2.2□□□□□ -2.06
ATP2B3Q16720 RNA5SP276-201ENST00000362580 94 ntBASIC2.2□□□□□ -2.06
ATP2B3Q16720 RNU6-1019P-201ENST00000364424 107 ntBASIC2.2□□□□□ -2.06
ATP2B3Q16720 SNORA16.1-201ENST00000364597 132 ntBASIC2.2□□□□□ -2.06
ATP2B3Q16720 SNORA16B-201ENST00000364674 135 ntBASIC2.2□□□□□ -2.06
ATP2B3Q16720 Y_RNA.398-201ENST00000383952 99 ntBASIC2.2□□□□□ -2.06
ATP2B3Q16720 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
ATP2B3Q16720 SNORA48.1-201ENST00000390879 135 ntBASIC2.2□□□□□ -2.06
ATP2B3Q16720 RNU6-1228P-201ENST00000391014 107 ntBASIC2.2□□□□□ -2.06
ATP2B3Q16720 AL158823.1-201ENST00000418441 478 ntBASIC2.2□□□□□ -2.06
ATP2B3Q16720 RNU2-56P-201ENST00000516826 190 ntBASIC2.2□□□□□ -2.06
ATP2B3Q16720 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.2□□□□□ -2.06
ATP2B3Q16720 MIR8081-201ENST00000611533 95 ntBASIC2.2□□□□□ -2.06
ATP2B3Q16720 AL353997.5-201ENST00000618886 171 ntBASIC2.2□□□□□ -2.06
ATP2B3Q16720 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
ATP2B3Q16720 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
ATP2B3Q16720 RNU6-103P-201ENST00000363686 107 ntBASIC2.19□□□□□ -2.06
ATP2B3Q16720 Y_RNA.170-201ENST00000363746 110 ntBASIC2.19□□□□□ -2.06
ATP2B3Q16720 MIR15B-201ENST00000385045 98 ntBASIC2.19□□□□□ -2.06
ATP2B3Q16720 RNU6-482P-201ENST00000391068 107 ntBASIC2.19□□□□□ -2.06
ATP2B3Q16720 SNRPGP10-201ENST00000432323 225 ntBASIC2.19□□□□□ -2.06
ATP2B3Q16720 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.19□□□□□ -2.06
ATP2B3Q16720 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.19□□□□□ -2.06
ATP2B3Q16720 SNRPGP8-201ENST00000454064 226 ntBASIC2.19□□□□□ -2.06
ATP2B3Q16720 AL049830.1-201ENST00000468034 425 ntBASIC2.19□□□□□ -2.06
ATP2B3Q16720 HMGN1P7-201ENST00000491722 313 ntBASIC2.19□□□□□ -2.06
ATP2B3Q16720 JPX_2.1-201ENST00000614161 69 ntBASIC2.19□□□□□ -2.06
ATP2B3Q16720 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.19□□□□□ -2.06
ATP2B3Q16720 MIR8054-201ENST00000620877 86 ntBASIC2.19□□□□□ -2.06
ATP2B3Q16720 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
ATP2B3Q16720 MIR126-201ENST00000362291 85 ntBASIC2.18□□□□□ -2.06
ATP2B3Q16720 RNU1-17P-201ENST00000363022 152 ntBASIC2.18□□□□□ -2.06
ATP2B3Q16720 SNORD68-201ENST00000363214 84 ntBASIC2.18□□□□□ -2.06
ATP2B3Q16720 SNORD45.3-201ENST00000363836 72 ntBASIC2.18□□□□□ -2.06
ATP2B3Q16720 RNA5SP212-201ENST00000391223 107 ntBASIC2.18□□□□□ -2.06
ATP2B3Q16720 AL627390.1-201ENST00000396055 340 ntBASIC2.18□□□□□ -2.06
ATP2B3Q16720 RNU6-394P-201ENST00000410735 107 ntBASIC2.18□□□□□ -2.06
ATP2B3Q16720 AL356379.1-201ENST00000414105 126 ntBASIC2.18□□□□□ -2.06
ATP2B3Q16720 STAG3L5P-204ENST00000443759 179 ntBASIC2.18□□□□□ -2.06
ATP2B3Q16720 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.18□□□□□ -2.06
ATP2B3Q16720 RNU6-250P-201ENST00000516958 103 ntBASIC2.18□□□□□ -2.06
ATP2B3Q16720 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.18□□□□□ -2.06
ATP2B3Q16720 AP002004.2-201ENST00000531656 154 ntBASIC2.18□□□□□ -2.06
ATP2B3Q16720 SUB1P4-201ENST00000566062 339 ntBASIC2.18□□□□□ -2.06
ATP2B3Q16720 MIR3144-201ENST00000579460 79 ntBASIC2.18□□□□□ -2.06
ATP2B3Q16720 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
ATP2B3Q16720 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
ATP2B3Q16720 RNU6-112P-201ENST00000363599 104 ntBASIC2.17□□□□□ -2.06
ATP2B3Q16720 Y_RNA.272-201ENST00000364696 102 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms