Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
ECM1Q16610 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
ECM1Q16610 RNU6-1084P-201ENST00000362498 107 ntBASIC3.13□□□□□ -1.91
ECM1Q16610 RNU6-1124P-201ENST00000384169 107 ntBASIC3.13□□□□□ -1.91
ECM1Q16610 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.13□□□□□ -1.91
ECM1Q16610 AC022217.4-201ENST00000604389 163 ntBASIC3.13□□□□□ -1.91
ECM1Q16610 MALAT1.1-201ENST00000618249 95 ntBASIC3.13□□□□□ -1.91
ECM1Q16610 Y_RNA.818-201ENST00000618813 71 ntBASIC3.13□□□□□ -1.91
ECM1Q16610 AL021368.2-201ENST00000606125 5352 ntBASIC3.13□□□□□ -1.91
ECM1Q16610 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.13□□□□□ -1.91
ECM1Q16610 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
ECM1Q16610 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
ECM1Q16610 SNORA80A-201ENST00000363922 136 ntBASIC3.12□□□□□ -1.91
ECM1Q16610 Y_RNA.265-201ENST00000364677 108 ntBASIC3.12□□□□□ -1.91
ECM1Q16610 RNU6-972P-201ENST00000391208 107 ntBASIC3.12□□□□□ -1.91
ECM1Q16610 AL590004.2-201ENST00000404787 371 ntBASIC3.12□□□□□ -1.91
ECM1Q16610 MIR1255A-201ENST00000408338 113 ntBASIC3.12□□□□□ -1.91
ECM1Q16610 RNA5SP136-201ENST00000410906 107 ntBASIC3.12□□□□□ -1.91
ECM1Q16610 MTATP6P21-201ENST00000440681 189 ntBASIC3.12□□□□□ -1.91
ECM1Q16610 RNA5SP236-201ENST00000516169 116 ntBASIC3.12□□□□□ -1.91
ECM1Q16610 SNORA31.26-201ENST00000517250 137 ntBASIC3.12□□□□□ -1.91
ECM1Q16610 AC026421.1-201ENST00000519101 163 ntBASIC3.12□□□□□ -1.91
ECM1Q16610 AC107016.2-201ENST00000547968 190 ntBASIC3.12□□□□□ -1.91
ECM1Q16610 SNORD115-40-201ENST00000606510 82 ntBASIC3.12□□□□□ -1.91
ECM1Q16610 AL365361.1-201ENST00000566942 3481 ntBASIC3.12□□□□□ -1.91
ECM1Q16610 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ECM1Q16610 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
ECM1Q16610 Y_RNA.486-201ENST00000384398 107 ntBASIC3.11□□□□□ -1.91
ECM1Q16610 MIR624-201ENST00000385217 97 ntBASIC3.11□□□□□ -1.91
ECM1Q16610 RNU11-3P-201ENST00000391111 133 ntBASIC3.11□□□□□ -1.91
ECM1Q16610 RNA5SP127-201ENST00000411051 133 ntBASIC3.11□□□□□ -1.91
ECM1Q16610 AC245047.3-201ENST00000429428 127 ntBASIC3.11□□□□□ -1.91
ECM1Q16610 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.11□□□□□ -1.91
ECM1Q16610 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.11□□□□□ -1.91
ECM1Q16610 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
ECM1Q16610 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
ECM1Q16610 ZNF720P1-201ENST00000562403 1939 ntBASIC3.11□□□□□ -1.91
ECM1Q16610 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ECM1Q16610 SNORA1B-201ENST00000362535 133 ntBASIC3.1□□□□□ -1.91
ECM1Q16610 Y_RNA.49-201ENST00000362714 112 ntBASIC3.1□□□□□ -1.91
ECM1Q16610 Y_RNA.78-201ENST00000362970 110 ntBASIC3.1□□□□□ -1.91
ECM1Q16610 Y_RNA.91-201ENST00000363042 107 ntBASIC3.1□□□□□ -1.91
ECM1Q16610 SNORD68-201ENST00000363214 84 ntBASIC3.1□□□□□ -1.91
ECM1Q16610 SNORD14E-201ENST00000364009 85 ntBASIC3.1□□□□□ -1.91
ECM1Q16610 snoU2-30.1-201ENST00000365012 70 ntBASIC3.1□□□□□ -1.91
ECM1Q16610 SNORD24-201ENST00000383884 75 ntBASIC3.1□□□□□ -1.91
ECM1Q16610 RNU6-442P-201ENST00000383968 104 ntBASIC3.1□□□□□ -1.91
ECM1Q16610 RNA5SP465-201ENST00000391195 109 ntBASIC3.1□□□□□ -1.91
ECM1Q16610 COX6CP6-201ENST00000490840 228 ntBASIC3.1□□□□□ -1.91
ECM1Q16610 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
ECM1Q16610 AC008507.4-201ENST00000585464 127 ntBASIC3.1□□□□□ -1.91
ECM1Q16610 FAM71BP1-201ENST00000604431 523 ntBASIC3.1□□□□□ -1.91
ECM1Q16610 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.1□□□□□ -1.91
ECM1Q16610 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.1□□□□□ -1.91
ECM1Q16610 AL136360.1-201ENST00000503377 1900 ntBASIC3.1□□□□□ -1.91
ECM1Q16610 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.1□□□□□ -1.91
ECM1Q16610 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ECM1Q16610 Y_RNA.244-201ENST00000364484 109 ntBASIC3.09□□□□□ -1.91
ECM1Q16610 Y_RNA.342-201ENST00000365352 113 ntBASIC3.09□□□□□ -1.91
ECM1Q16610 RNU1-148P-201ENST00000384472 162 ntBASIC3.09□□□□□ -1.91
ECM1Q16610 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.09□□□□□ -1.91
ECM1Q16610 Y_RNA.593-201ENST00000410292 98 ntBASIC3.09□□□□□ -1.91
ECM1Q16610 SNORA19.1-201ENST00000410656 129 ntBASIC3.09□□□□□ -1.91
ECM1Q16610 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.09□□□□□ -1.91
ECM1Q16610 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.09□□□□□ -1.91
ECM1Q16610 MRPS17P9-201ENST00000511924 393 ntBASIC3.09□□□□□ -1.91
ECM1Q16610 AC091544.4-201ENST00000555268 342 ntBASIC3.09□□□□□ -1.91
ECM1Q16610 ZNF861P-201ENST00000588126 639 ntBASIC3.09□□□□□ -1.91
ECM1Q16610 AL590808.1-201ENST00000618696 141 ntBASIC3.09□□□□□ -1.91
ECM1Q16610 MIR2052-201ENST00000636055 55 ntBASIC3.09□□□□□ -1.91
ECM1Q16610 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
ECM1Q16610 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ECM1Q16610 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
ECM1Q16610 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
ECM1Q16610 MIR522-201ENST00000385071 87 ntBASIC3.08□□□□□ -1.92
ECM1Q16610 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
ECM1Q16610 AL138827.1-201ENST00000402666 306 ntBASIC3.08□□□□□ -1.92
ECM1Q16610 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.08□□□□□ -1.92
ECM1Q16610 AC087499.2-201ENST00000432861 149 ntBASIC3.08□□□□□ -1.92
ECM1Q16610 NDUFA4P2-201ENST00000489989 244 ntBASIC3.08□□□□□ -1.92
ECM1Q16610 RNA5SP367-201ENST00000516557 118 ntBASIC3.08□□□□□ -1.92
ECM1Q16610 MIR3202-2-201ENST00000635980 79 ntBASIC3.08□□□□□ -1.92
ECM1Q16610 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ECM1Q16610 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
ECM1Q16610 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
ECM1Q16610 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.07□□□□□ -1.92
ECM1Q16610 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ECM1Q16610 SNORA63.5-201ENST00000363548 123 ntBASIC3.07□□□□□ -1.92
ECM1Q16610 RNU6-1296P-201ENST00000383879 107 ntBASIC3.07□□□□□ -1.92
ECM1Q16610 RNU6-787P-201ENST00000384032 107 ntBASIC3.07□□□□□ -1.92
ECM1Q16610 RN7SKP200-201ENST00000410564 320 ntBASIC3.07□□□□□ -1.92
ECM1Q16610 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.07□□□□□ -1.92
ECM1Q16610 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.07□□□□□ -1.92
ECM1Q16610 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.07□□□□□ -1.92
ECM1Q16610 AF228730.3-201ENST00000436691 102 ntBASIC3.07□□□□□ -1.92
ECM1Q16610 AC107297.1-201ENST00000459991 176 ntBASIC3.07□□□□□ -1.92
ECM1Q16610 AC139453.2-201ENST00000487255 133 ntBASIC3.07□□□□□ -1.92
ECM1Q16610 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.07□□□□□ -1.92
ECM1Q16610 RNU6-904P-201ENST00000516206 101 ntBASIC3.07□□□□□ -1.92
ECM1Q16610 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms