Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RNU6-442P-201ENST00000383968 104 ntBASIC0.88□□□□□ -2.27
SCN1BQ07699 SNORD28B-201ENST00000390993 75 ntBASIC0.88□□□□□ -2.27
SCN1BQ07699 MIR1278-201ENST00000408753 81 ntBASIC0.88□□□□□ -2.27
SCN1BQ07699 RNU2-64P-201ENST00000411315 191 ntBASIC0.88□□□□□ -2.27
SCN1BQ07699 FABP5P4-201ENST00000437203 171 ntBASIC0.88□□□□□ -2.27
SCN1BQ07699 RNU7-141P-201ENST00000459304 62 ntBASIC0.88□□□□□ -2.27
SCN1BQ07699 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.88□□□□□ -2.27
SCN1BQ07699 PSMC1P5-201ENST00000512850 177 ntBASIC0.88□□□□□ -2.27
SCN1BQ07699 RNU6-1053P-201ENST00000515930 101 ntBASIC0.88□□□□□ -2.27
SCN1BQ07699 AL080274.1-201ENST00000605565 220 ntBASIC0.88□□□□□ -2.27
SCN1BQ07699 MIR605-201ENST00000385078 83 ntBASIC0.87□□□□□ -2.27
SCN1BQ07699 RNU2-14P-201ENST00000411053 191 ntBASIC0.87□□□□□ -2.27
SCN1BQ07699 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.87□□□□□ -2.27
SCN1BQ07699 RNU6-437P-201ENST00000459408 95 ntBASIC0.87□□□□□ -2.27
SCN1BQ07699 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.87□□□□□ -2.27
SCN1BQ07699 RNU6-475P-201ENST00000516073 104 ntBASIC0.87□□□□□ -2.27
SCN1BQ07699 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
SCN1BQ07699 AC109810.1-201ENST00000534066 224 ntBASIC0.87□□□□□ -2.27
SCN1BQ07699 AL133255.1-201ENST00000606374 441 ntBASIC0.87□□□□□ -2.27
SCN1BQ07699 SNORD113-5-201ENST00000607261 78 ntBASIC0.87□□□□□ -2.27
SCN1BQ07699 snoU13.31-201ENST00000607291 104 ntBASIC0.87□□□□□ -2.27
SCN1BQ07699 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.87□□□□□ -2.27
SCN1BQ07699 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.87□□□□□ -2.27
SCN1BQ07699 MIR4251-201ENST00000635819 61 ntBASIC0.87□□□□□ -2.27
SCN1BQ07699 Y_RNA.112-201ENST00000363250 102 ntBASIC0.86□□□□□ -2.27
SCN1BQ07699 SNORA72.4-201ENST00000384174 132 ntBASIC0.86□□□□□ -2.27
SCN1BQ07699 MIR608-201ENST00000384820 100 ntBASIC0.86□□□□□ -2.27
SCN1BQ07699 MT-TD-201ENST00000387419 68 ntBASIC0.86□□□□□ -2.27
SCN1BQ07699 SNORA36B-201ENST00000410438 131 ntBASIC0.86□□□□□ -2.27
SCN1BQ07699 SEPT14P8-201ENST00000508026 178 ntBASIC0.86□□□□□ -2.27
SCN1BQ07699 RNU6-1046P-201ENST00000516538 107 ntBASIC0.86□□□□□ -2.27
SCN1BQ07699 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.86□□□□□ -2.27
SCN1BQ07699 RPL23AP91-201ENST00000569211 455 ntBASIC0.86□□□□□ -2.27
SCN1BQ07699 AC005357.1-201ENST00000588399 301 ntBASIC0.86□□□□□ -2.27
SCN1BQ07699 Y_RNA.327-201ENST00000365201 102 ntBASIC0.85□□□□□ -2.27
SCN1BQ07699 MIR1302-11-201ENST00000408051 138 ntBASIC0.85□□□□□ -2.27
SCN1BQ07699 MIR1302-9-201ENST00000408365 138 ntBASIC0.85□□□□□ -2.27
SCN1BQ07699 MIR1302-10-201ENST00000408734 138 ntBASIC0.85□□□□□ -2.27
SCN1BQ07699 RNU6-1170P-201ENST00000515974 106 ntBASIC0.85□□□□□ -2.27
SCN1BQ07699 AC136628.3-201ENST00000521868 290 ntBASIC0.85□□□□□ -2.27
SCN1BQ07699 MIR2681-201ENST00000581814 105 ntBASIC0.85□□□□□ -2.27
SCN1BQ07699 MIR548AR-201ENST00000582191 57 ntBASIC0.85□□□□□ -2.27
SCN1BQ07699 AC008507.4-201ENST00000585464 127 ntBASIC0.85□□□□□ -2.27
SCN1BQ07699 MIR1302-2-201ENST00000607096 138 ntBASIC0.85□□□□□ -2.27
SCN1BQ07699 RNU6-94P-201ENST00000607728 107 ntBASIC0.85□□□□□ -2.27
SCN1BQ07699 uc_338.22-201ENST00000622722 187 ntBASIC0.85□□□□□ -2.27
SCN1BQ07699 AL442644.1-201ENST00000454390 3105 ntBASIC0.85□□□□□ -2.27
SCN1BQ07699 Y_RNA.164-201ENST00000363709 102 ntBASIC0.84□□□□□ -2.27
SCN1BQ07699 RNU6-1335P-201ENST00000365426 107 ntBASIC0.84□□□□□ -2.27
SCN1BQ07699 Y_RNA.424-201ENST00000384063 103 ntBASIC0.84□□□□□ -2.27
SCN1BQ07699 MIR570-201ENST00000384917 97 ntBASIC0.84□□□□□ -2.27
SCN1BQ07699 RNU6-308P-201ENST00000390957 107 ntBASIC0.84□□□□□ -2.27
SCN1BQ07699 SNRPGP14-201ENST00000435400 219 ntBASIC0.84□□□□□ -2.27
SCN1BQ07699 RNU6-397P-201ENST00000516226 104 ntBASIC0.84□□□□□ -2.27
SCN1BQ07699 AC136443.5-201ENST00000603741 370 ntBASIC0.84□□□□□ -2.27
SCN1BQ07699 Pinc.1-201ENST00000616452 154 ntBASIC0.84□□□□□ -2.27
SCN1BQ07699 MIR369-201ENST00000362155 70 ntBASIC0.83□□□□□ -2.28
SCN1BQ07699 RNU6-801P-201ENST00000364087 105 ntBASIC0.83□□□□□ -2.28
SCN1BQ07699 RNU6-268P-201ENST00000364174 107 ntBASIC0.83□□□□□ -2.28
SCN1BQ07699 RNU6-654P-201ENST00000364373 107 ntBASIC0.83□□□□□ -2.28
SCN1BQ07699 SNORD72-201ENST00000390994 80 ntBASIC0.83□□□□□ -2.28
SCN1BQ07699 SNORA26.5-201ENST00000391215 123 ntBASIC0.83□□□□□ -2.28
SCN1BQ07699 AL035398.1-201ENST00000430869 322 ntBASIC0.83□□□□□ -2.28
SCN1BQ07699 MTND4P19-201ENST00000446659 478 ntBASIC0.83□□□□□ -2.28
SCN1BQ07699 COX6CP14-201ENST00000469580 174 ntBASIC0.83□□□□□ -2.28
SCN1BQ07699 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.83□□□□□ -2.28
SCN1BQ07699 TRMT112P2-201ENST00000512910 132 ntBASIC0.83□□□□□ -2.28
SCN1BQ07699 MIR4300-201ENST00000581016 96 ntBASIC0.83□□□□□ -2.28
SCN1BQ07699 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.83□□□□□ -2.28
SCN1BQ07699 AC015726.2-201ENST00000620112 122 ntBASIC0.83□□□□□ -2.28
SCN1BQ07699 AC023934.1-201ENST00000574529 2389 ntBASIC0.83□□□□□ -2.28
SCN1BQ07699 SNORD113-8-201ENST00000363497 74 ntBASIC0.82□□□□□ -2.28
SCN1BQ07699 RNU6-674P-201ENST00000363831 107 ntBASIC0.82□□□□□ -2.28
SCN1BQ07699 RNU4-38P-201ENST00000364472 129 ntBASIC0.82□□□□□ -2.28
SCN1BQ07699 Y_RNA.418-201ENST00000384029 102 ntBASIC0.82□□□□□ -2.28
SCN1BQ07699 RNU6-102P-201ENST00000384485 104 ntBASIC0.82□□□□□ -2.28
SCN1BQ07699 SNORD89-201ENST00000390981 114 ntBASIC0.82□□□□□ -2.28
SCN1BQ07699 RNU6-1248P-201ENST00000391096 64 ntBASIC0.82□□□□□ -2.28
SCN1BQ07699 MTCO2P33-201ENST00000402100 465 ntBASIC0.82□□□□□ -2.28
SCN1BQ07699 MIR1302-7-201ENST00000408841 72 ntBASIC0.82□□□□□ -2.28
SCN1BQ07699 Y_RNA.602-201ENST00000410535 92 ntBASIC0.82□□□□□ -2.28
SCN1BQ07699 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.82□□□□□ -2.28
SCN1BQ07699 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.82□□□□□ -2.28
SCN1BQ07699 Y_RNA.676-201ENST00000516393 96 ntBASIC0.82□□□□□ -2.28
SCN1BQ07699 MIR4653-201ENST00000585107 83 ntBASIC0.82□□□□□ -2.28
SCN1BQ07699 MIR376A1-201ENST00000616574 68 ntBASIC0.82□□□□□ -2.28
SCN1BQ07699 RNY1P10-201ENST00000363268 113 ntBASIC0.81□□□□□ -2.28
SCN1BQ07699 Y_RNA.419-201ENST00000384041 102 ntBASIC0.81□□□□□ -2.28
SCN1BQ07699 MIR100-201ENST00000385259 80 ntBASIC0.81□□□□□ -2.28
SCN1BQ07699 U8.17-201ENST00000391292 132 ntBASIC0.81□□□□□ -2.28
SCN1BQ07699 RNU6-994P-201ENST00000410507 111 ntBASIC0.81□□□□□ -2.28
SCN1BQ07699 AC006461.1-201ENST00000412637 326 ntBASIC0.81□□□□□ -2.28
SCN1BQ07699 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.81□□□□□ -2.28
SCN1BQ07699 AL392103.1-201ENST00000447000 198 ntBASIC0.81□□□□□ -2.28
SCN1BQ07699 RNU6-191P-201ENST00000516295 94 ntBASIC0.81□□□□□ -2.28
SCN1BQ07699 RNU6-830P-201ENST00000516353 107 ntBASIC0.81□□□□□ -2.28
SCN1BQ07699 RNU11-2P-201ENST00000516898 142 ntBASIC0.81□□□□□ -2.28
SCN1BQ07699 RNU7-181P-201ENST00000517234 74 ntBASIC0.81□□□□□ -2.28
SCN1BQ07699 AC036111.3-201ENST00000526389 112 ntBASIC0.81□□□□□ -2.28
SCN1BQ07699 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms