Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 RNU6-144P-201ENST00000383951 107 ntBASIC1.1□□□□□ -2.23
CKAP4Q07065 RNU6-211P-201ENST00000384047 107 ntBASIC1.1□□□□□ -2.23
CKAP4Q07065 Y_RNA.447-201ENST00000384184 113 ntBASIC1.1□□□□□ -2.23
CKAP4Q07065 Y_RNA.478-201ENST00000384358 107 ntBASIC1.1□□□□□ -2.23
CKAP4Q07065 Y_RNA.539-201ENST00000384635 107 ntBASIC1.1□□□□□ -2.23
CKAP4Q07065 MT-TG-201ENST00000387429 68 ntBASIC1.1□□□□□ -2.23
CKAP4Q07065 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.1□□□□□ -2.23
CKAP4Q07065 BTF3P11-201ENST00000426582 477 ntBASIC1.1□□□□□ -2.23
CKAP4Q07065 FTH1P12-201ENST00000432137 551 ntBASIC1.1□□□□□ -2.23
CKAP4Q07065 Z98949.2-201ENST00000440996 144 ntBASIC1.1□□□□□ -2.23
CKAP4Q07065 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.1□□□□□ -2.23
CKAP4Q07065 SNORA59A-201ENST00000459326 152 ntBASIC1.1□□□□□ -2.23
CKAP4Q07065 snoU13.15-201ENST00000459407 104 ntBASIC1.1□□□□□ -2.23
CKAP4Q07065 RNU6-1023P-201ENST00000516137 106 ntBASIC1.1□□□□□ -2.23
CKAP4Q07065 RNU2-56P-201ENST00000516826 190 ntBASIC1.1□□□□□ -2.23
CKAP4Q07065 RNU6-548P-201ENST00000517083 115 ntBASIC1.1□□□□□ -2.23
CKAP4Q07065 MIR4709-201ENST00000577272 72 ntBASIC1.1□□□□□ -2.23
CKAP4Q07065 SNORA77B-201ENST00000578179 125 ntBASIC1.1□□□□□ -2.23
CKAP4Q07065 MIR3128-201ENST00000581957 66 ntBASIC1.1□□□□□ -2.23
CKAP4Q07065 MIR4762-201ENST00000585261 75 ntBASIC1.1□□□□□ -2.23
CKAP4Q07065 AC005357.1-201ENST00000588399 301 ntBASIC1.1□□□□□ -2.23
CKAP4Q07065 AC011921.3-201ENST00000605540 361 ntBASIC1.1□□□□□ -2.23
CKAP4Q07065 BX284668.6-201ENST00000606899 438 ntBASIC1.1□□□□□ -2.23
CKAP4Q07065 AC021506.2-201ENST00000612354 169 ntBASIC1.1□□□□□ -2.23
CKAP4Q07065 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CKAP4Q07065 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CKAP4Q07065 AC134026.1-201ENST00000623249 2239 ntBASIC1.09□□□□□ -2.23
CKAP4Q07065 Y_RNA.203-201ENST00000364106 102 ntBASIC1.09□□□□□ -2.23
CKAP4Q07065 RNU4-41P-201ENST00000364426 143 ntBASIC1.09□□□□□ -2.23
CKAP4Q07065 Y_RNA.277-201ENST00000364754 102 ntBASIC1.09□□□□□ -2.23
CKAP4Q07065 RNU6-969P-201ENST00000383900 105 ntBASIC1.09□□□□□ -2.23
CKAP4Q07065 Y_RNA.401-201ENST00000383965 117 ntBASIC1.09□□□□□ -2.23
CKAP4Q07065 RNU6-1080P-201ENST00000383982 107 ntBASIC1.09□□□□□ -2.23
CKAP4Q07065 MIR618-201ENST00000385287 98 ntBASIC1.09□□□□□ -2.23
CKAP4Q07065 RNA5SP482-201ENST00000391269 118 ntBASIC1.09□□□□□ -2.23
CKAP4Q07065 MTCO2P33-201ENST00000402100 465 ntBASIC1.09□□□□□ -2.23
CKAP4Q07065 MIR1267-201ENST00000408723 78 ntBASIC1.09□□□□□ -2.23
CKAP4Q07065 SNORA36B-201ENST00000410438 131 ntBASIC1.09□□□□□ -2.23
CKAP4Q07065 COX6CP10-201ENST00000416832 224 ntBASIC1.09□□□□□ -2.23
CKAP4Q07065 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.09□□□□□ -2.23
CKAP4Q07065 AC233266.1-201ENST00000454518 96 ntBASIC1.09□□□□□ -2.23
CKAP4Q07065 AL049830.1-201ENST00000468034 425 ntBASIC1.09□□□□□ -2.23
CKAP4Q07065 OR2A41P-201ENST00000473586 105 ntBASIC1.09□□□□□ -2.23
CKAP4Q07065 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.09□□□□□ -2.23
CKAP4Q07065 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.09□□□□□ -2.23
CKAP4Q07065 MIR5688-201ENST00000580619 83 ntBASIC1.09□□□□□ -2.23
CKAP4Q07065 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.09□□□□□ -2.23
CKAP4Q07065 SNORA28-201ENST00000606769 126 ntBASIC1.09□□□□□ -2.23
CKAP4Q07065 AC242852.1-201ENST00000612151 96 ntBASIC1.09□□□□□ -2.23
CKAP4Q07065 AC244015.1-201ENST00000622301 99 ntBASIC1.09□□□□□ -2.23
CKAP4Q07065 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.09□□□□□ -2.23
CKAP4Q07065 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.09□□□□□ -2.24
CKAP4Q07065 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.09□□□□□ -2.24
CKAP4Q07065 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.24
CKAP4Q07065 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CKAP4Q07065 MIRLET7C-201ENST00000362160 84 ntBASIC1.08□□□□□ -2.24
CKAP4Q07065 MIR302D-201ENST00000362275 68 ntBASIC1.08□□□□□ -2.24
CKAP4Q07065 Y_RNA.76-201ENST00000362931 109 ntBASIC1.08□□□□□ -2.24
CKAP4Q07065 RNU6-414P-201ENST00000363705 104 ntBASIC1.08□□□□□ -2.24
CKAP4Q07065 U8.5-201ENST00000364528 136 ntBASIC1.08□□□□□ -2.24
CKAP4Q07065 Y_RNA.253-201ENST00000364562 112 ntBASIC1.08□□□□□ -2.24
CKAP4Q07065 AL034345.1-201ENST00000407768 123 ntBASIC1.08□□□□□ -2.24
CKAP4Q07065 Y_RNA.618-201ENST00000410949 107 ntBASIC1.08□□□□□ -2.24
CKAP4Q07065 RPS27P16-201ENST00000425758 201 ntBASIC1.08□□□□□ -2.24
CKAP4Q07065 JTBP1-201ENST00000441314 247 ntBASIC1.08□□□□□ -2.24
CKAP4Q07065 STAG3L5P-204ENST00000443759 179 ntBASIC1.08□□□□□ -2.24
CKAP4Q07065 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.08□□□□□ -2.24
CKAP4Q07065 RNU6-437P-201ENST00000459408 95 ntBASIC1.08□□□□□ -2.24
CKAP4Q07065 RPL30P7-201ENST00000479312 323 ntBASIC1.08□□□□□ -2.24
CKAP4Q07065 RPL23AP54-201ENST00000495129 419 ntBASIC1.08□□□□□ -2.24
CKAP4Q07065 Y_RNA.673-201ENST00000516306 88 ntBASIC1.08□□□□□ -2.24
CKAP4Q07065 AL591926.4-201ENST00000616895 298 ntBASIC1.08□□□□□ -2.24
CKAP4Q07065 AC073349.3-201ENST00000617616 186 ntBASIC1.08□□□□□ -2.24
CKAP4Q07065 AL513423.1-201ENST00000621695 132 ntBASIC1.08□□□□□ -2.24
CKAP4Q07065 AC095038.3-201ENST00000634439 195 ntBASIC1.08□□□□□ -2.24
CKAP4Q07065 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
CKAP4Q07065 Y_RNA.60-201ENST00000362831 98 ntBASIC1.07□□□□□ -2.24
CKAP4Q07065 RNU6-1205P-201ENST00000363625 106 ntBASIC1.07□□□□□ -2.24
CKAP4Q07065 RNY1-201ENST00000364228 113 ntBASIC1.07□□□□□ -2.24
CKAP4Q07065 Y_RNA.796-201ENST00000364268 102 ntBASIC1.07□□□□□ -2.24
CKAP4Q07065 Y_RNA.799-201ENST00000364992 102 ntBASIC1.07□□□□□ -2.24
CKAP4Q07065 Y_RNA.304-201ENST00000365011 112 ntBASIC1.07□□□□□ -2.24
CKAP4Q07065 Y_RNA.477-201ENST00000384352 108 ntBASIC1.07□□□□□ -2.24
CKAP4Q07065 RNU6-424P-201ENST00000384367 105 ntBASIC1.07□□□□□ -2.24
CKAP4Q07065 MIR526A2-201ENST00000390198 65 ntBASIC1.07□□□□□ -2.24
CKAP4Q07065 Y_RNA.638-201ENST00000459374 113 ntBASIC1.07□□□□□ -2.24
CKAP4Q07065 snoU13.26-201ENST00000459452 105 ntBASIC1.07□□□□□ -2.24
CKAP4Q07065 HMGN1P7-201ENST00000491722 313 ntBASIC1.07□□□□□ -2.24
CKAP4Q07065 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.07□□□□□ -2.24
CKAP4Q07065 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.07□□□□□ -2.24
CKAP4Q07065 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.07□□□□□ -2.24
CKAP4Q07065 AP000942.4-201ENST00000604811 241 ntBASIC1.07□□□□□ -2.24
CKAP4Q07065 SNORD114-21-201ENST00000606412 72 ntBASIC1.07□□□□□ -2.24
CKAP4Q07065 AL021707.8-201ENST00000609428 183 ntBASIC1.07□□□□□ -2.24
CKAP4Q07065 AL442067.1-201ENST00000613261 223 ntBASIC1.07□□□□□ -2.24
CKAP4Q07065 RNU6-1123P-201ENST00000362347 106 ntBASIC1.06□□□□□ -2.24
CKAP4Q07065 Y_RNA.54-201ENST00000362766 105 ntBASIC1.06□□□□□ -2.24
CKAP4Q07065 Y_RNA.265-201ENST00000364677 108 ntBASIC1.06□□□□□ -2.24
CKAP4Q07065 SNORA25.8-201ENST00000364831 128 ntBASIC1.06□□□□□ -2.24
CKAP4Q07065 MIR522-201ENST00000385071 87 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 760.1 ms