Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 RNU4-30P-201ENST00000410245 143 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 RNU6-855P-201ENST00000410395 104 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 AL390729.2-201ENST00000416137 156 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 AC005042.3-201ENST00000453230 174 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.55□□□□□ -2.32
TNFRSF9Q07011 MTND3P22-201ENST00000510932 243 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 SNORA40.14-201ENST00000516543 86 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 SNORD45.4-201ENST00000516629 73 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 AC022616.4-201ENST00000522985 181 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 MIR3145-201ENST00000580727 82 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 POLR3GP1-201ENST00000594073 261 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 RPS29P30-201ENST00000600975 111 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 AL357312.1-201ENST00000603879 298 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 Y_RNA.772-201ENST00000606692 102 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 AC006157.1-201ENST00000611750 366 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 MIR6835-201ENST00000621552 64 ntBASIC0.55□□□□□ -2.32
TNFRSF9Q07011 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
TNFRSF9Q07011 Y_RNA.197-201ENST00000364004 102 ntBASIC0.54□□□□□ -2.32
TNFRSF9Q07011 RNU1-115P-201ENST00000365329 160 ntBASIC0.54□□□□□ -2.32
TNFRSF9Q07011 Y_RNA.462-201ENST00000384268 102 ntBASIC0.54□□□□□ -2.32
TNFRSF9Q07011 SNRPGP10-201ENST00000432323 225 ntBASIC0.54□□□□□ -2.32
TNFRSF9Q07011 RPL39P39-201ENST00000455840 151 ntBASIC0.54□□□□□ -2.32
TNFRSF9Q07011 SNORD124-201ENST00000459577 104 ntBASIC0.54□□□□□ -2.32
TNFRSF9Q07011 AC117454.1-201ENST00000491120 168 ntBASIC0.54□□□□□ -2.32
TNFRSF9Q07011 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.54□□□□□ -2.32
TNFRSF9Q07011 RNU6-976P-201ENST00000516086 111 ntBASIC0.54□□□□□ -2.32
TNFRSF9Q07011 RNU7-110P-201ENST00000516891 62 ntBASIC0.54□□□□□ -2.32
TNFRSF9Q07011 AC090142.3-201ENST00000519012 385 ntBASIC0.54□□□□□ -2.32
TNFRSF9Q07011 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.54□□□□□ -2.32
TNFRSF9Q07011 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
TNFRSF9Q07011 AL121655.1-201ENST00000605811 308 ntBASIC0.54□□□□□ -2.32
TNFRSF9Q07011 Y_RNA.804-201ENST00000615262 101 ntBASIC0.54□□□□□ -2.32
TNFRSF9Q07011 AC007485.1-201ENST00000616755 206 ntBASIC0.54□□□□□ -2.32
TNFRSF9Q07011 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.54□□□□□ -2.32
TNFRSF9Q07011 Y_RNA.813-201ENST00000364639 102 ntBASIC0.53□□□□□ -2.32
TNFRSF9Q07011 U8.7-201ENST00000364940 136 ntBASIC0.53□□□□□ -2.32
TNFRSF9Q07011 Y_RNA.368-201ENST00000365547 113 ntBASIC0.53□□□□□ -2.32
TNFRSF9Q07011 AC117470.1-201ENST00000381974 330 ntBASIC0.53□□□□□ -2.32
TNFRSF9Q07011 RNU6-1323P-201ENST00000384025 107 ntBASIC0.53□□□□□ -2.32
TNFRSF9Q07011 Y_RNA.419-201ENST00000384041 102 ntBASIC0.53□□□□□ -2.32
TNFRSF9Q07011 Y_RNA.439-201ENST00000384119 94 ntBASIC0.53□□□□□ -2.32
TNFRSF9Q07011 MIR7-2-201ENST00000384970 110 ntBASIC0.53□□□□□ -2.32
TNFRSF9Q07011 MIR452-201ENST00000385020 85 ntBASIC0.53□□□□□ -2.32
TNFRSF9Q07011 RNU6-710P-201ENST00000410424 105 ntBASIC0.53□□□□□ -2.32
TNFRSF9Q07011 RNU6-130P-201ENST00000411112 103 ntBASIC0.53□□□□□ -2.32
TNFRSF9Q07011 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.53□□□□□ -2.32
TNFRSF9Q07011 AC004812.1-201ENST00000540773 146 ntBASIC0.53□□□□□ -2.32
TNFRSF9Q07011 AL590095.2-201ENST00000604136 117 ntBASIC0.53□□□□□ -2.32
TNFRSF9Q07011 AL080274.1-201ENST00000605565 220 ntBASIC0.53□□□□□ -2.32
TNFRSF9Q07011 AC011373.1-201ENST00000607270 237 ntBASIC0.53□□□□□ -2.32
TNFRSF9Q07011 PART1_1.1-201ENST00000611761 217 ntBASIC0.53□□□□□ -2.32
TNFRSF9Q07011 AL391903.3-201ENST00000612158 163 ntBASIC0.53□□□□□ -2.32
TNFRSF9Q07011 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
TNFRSF9Q07011 uc_338.22-201ENST00000622722 187 ntBASIC0.53□□□□□ -2.32
TNFRSF9Q07011 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.53□□□□□ -2.32
TNFRSF9Q07011 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
TNFRSF9Q07011 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
TNFRSF9Q07011 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
TNFRSF9Q07011 Y_RNA.36-201ENST00000362602 112 ntBASIC0.52□□□□□ -2.33
TNFRSF9Q07011 Y_RNA.286-201ENST00000364813 102 ntBASIC0.52□□□□□ -2.33
TNFRSF9Q07011 SNORD14.1-201ENST00000365609 90 ntBASIC0.52□□□□□ -2.33
TNFRSF9Q07011 RNU6-969P-201ENST00000383900 105 ntBASIC0.52□□□□□ -2.33
TNFRSF9Q07011 Y_RNA.456-201ENST00000384232 111 ntBASIC0.52□□□□□ -2.33
TNFRSF9Q07011 SNORD63-201ENST00000384262 68 ntBASIC0.52□□□□□ -2.33
TNFRSF9Q07011 Y_RNA.471-201ENST00000384312 102 ntBASIC0.52□□□□□ -2.33
TNFRSF9Q07011 Y_RNA.551-201ENST00000384661 102 ntBASIC0.52□□□□□ -2.33
TNFRSF9Q07011 SNORA75.2-201ENST00000391138 150 ntBASIC0.52□□□□□ -2.33
TNFRSF9Q07011 RNU6-131P-201ENST00000391144 107 ntBASIC0.52□□□□□ -2.33
TNFRSF9Q07011 SNORA75.3-201ENST00000391231 150 ntBASIC0.52□□□□□ -2.33
TNFRSF9Q07011 AC063976.4-201ENST00000421971 163 ntBASIC0.52□□□□□ -2.33
TNFRSF9Q07011 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.52□□□□□ -2.33
TNFRSF9Q07011 RNU7-21P-201ENST00000459430 62 ntBASIC0.52□□□□□ -2.33
TNFRSF9Q07011 U8.20-201ENST00000459445 131 ntBASIC0.52□□□□□ -2.33
TNFRSF9Q07011 HMGN1P10-201ENST00000474557 553 ntBASIC0.52□□□□□ -2.33
TNFRSF9Q07011 RNU7-41P-201ENST00000515917 61 ntBASIC0.52□□□□□ -2.33
TNFRSF9Q07011 SNORD111.1-201ENST00000516421 86 ntBASIC0.52□□□□□ -2.33
TNFRSF9Q07011 SNORA18.7-201ENST00000516910 131 ntBASIC0.52□□□□□ -2.33
TNFRSF9Q07011 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.52□□□□□ -2.33
TNFRSF9Q07011 AC040926.1-201ENST00000530195 238 ntBASIC0.52□□□□□ -2.33
TNFRSF9Q07011 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.52□□□□□ -2.33
TNFRSF9Q07011 AC024405.2-202ENST00000532731 184 ntBASIC0.52□□□□□ -2.33
TNFRSF9Q07011 LARP7P1-201ENST00000605576 316 ntBASIC0.52□□□□□ -2.33
TNFRSF9Q07011 AL133255.1-201ENST00000606374 441 ntBASIC0.52□□□□□ -2.33
TNFRSF9Q07011 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.52□□□□□ -2.33
TNFRSF9Q07011 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
TNFRSF9Q07011 MIR369-201ENST00000362155 70 ntBASIC0.51□□□□□ -2.33
TNFRSF9Q07011 Y_RNA.31-201ENST00000362574 102 ntBASIC0.51□□□□□ -2.33
TNFRSF9Q07011 RNA5SP264-201ENST00000363115 107 ntBASIC0.51□□□□□ -2.33
TNFRSF9Q07011 SNORA25.3-201ENST00000363205 127 ntBASIC0.51□□□□□ -2.33
TNFRSF9Q07011 RNU6-1048P-201ENST00000364054 107 ntBASIC0.51□□□□□ -2.33
TNFRSF9Q07011 snoU2-30.1-201ENST00000365012 70 ntBASIC0.51□□□□□ -2.33
TNFRSF9Q07011 Y_RNA.383-201ENST00000383855 97 ntBASIC0.51□□□□□ -2.33
TNFRSF9Q07011 Y_RNA.393-201ENST00000383936 102 ntBASIC0.51□□□□□ -2.33
TNFRSF9Q07011 SNORA80D-201ENST00000384488 135 ntBASIC0.51□□□□□ -2.33
TNFRSF9Q07011 RNY1P4-201ENST00000384595 115 ntBASIC0.51□□□□□ -2.33
TNFRSF9Q07011 MIR520C-201ENST00000385005 87 ntBASIC0.51□□□□□ -2.33
TNFRSF9Q07011 MIR136-201ENST00000385207 82 ntBASIC0.51□□□□□ -2.33
TNFRSF9Q07011 RNU6-308P-201ENST00000390957 107 ntBASIC0.51□□□□□ -2.33
TNFRSF9Q07011 SNORD12-201ENST00000391002 90 ntBASIC0.51□□□□□ -2.33
TNFRSF9Q07011 RNU2-14P-201ENST00000411053 191 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms