Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 HMGN2P22-201ENST00000427588 175 ntBASIC-0.68□□□□□ -2.52
H3F3AP84243 AC236972.2-201ENST00000434979 310 ntBASIC-0.68□□□□□ -2.52
H3F3AP84243 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.68□□□□□ -2.52
H3F3AP84243 AC114755.3-201ENST00000481111 251 ntBASIC-0.68□□□□□ -2.52
H3F3AP84243 AC026782.1-201ENST00000512952 449 ntBASIC-0.68□□□□□ -2.52
H3F3AP84243 MIR4273-201ENST00000582824 84 ntBASIC-0.68□□□□□ -2.52
H3F3AP84243 AL355297.3-201ENST00000604082 446 ntBASIC-0.68□□□□□ -2.52
H3F3AP84243 AC124303.1-201ENST00000605703 360 ntBASIC-0.68□□□□□ -2.52
H3F3AP84243 AC109347.2-201ENST00000610220 349 ntBASIC-0.68□□□□□ -2.52
H3F3AP84243 MIR548AZ-201ENST00000616567 95 ntBASIC-0.68□□□□□ -2.52
H3F3AP84243 MIR8066-201ENST00000617280 78 ntBASIC-0.68□□□□□ -2.52
H3F3AP84243 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.69□□□□□ -2.52
H3F3AP84243 RNU6-254P-201ENST00000363377 107 ntBASIC-0.69□□□□□ -2.52
H3F3AP84243 SNORD114-11-201ENST00000363738 75 ntBASIC-0.69□□□□□ -2.52
H3F3AP84243 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.69□□□□□ -2.52
H3F3AP84243 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.69□□□□□ -2.52
H3F3AP84243 RNU6-268P-201ENST00000364174 107 ntBASIC-0.69□□□□□ -2.52
H3F3AP84243 RNU6-879P-201ENST00000364328 108 ntBASIC-0.69□□□□□ -2.52
H3F3AP84243 RNU6-740P-201ENST00000364734 105 ntBASIC-0.69□□□□□ -2.52
H3F3AP84243 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.69□□□□□ -2.52
H3F3AP84243 SNORD28-201ENST00000384706 75 ntBASIC-0.69□□□□□ -2.52
H3F3AP84243 MIR215-201ENST00000384858 110 ntBASIC-0.69□□□□□ -2.52
H3F3AP84243 MT-TH-201ENST00000387441 69 ntBASIC-0.69□□□□□ -2.52
H3F3AP84243 RNU6-284P-201ENST00000411105 106 ntBASIC-0.69□□□□□ -2.52
H3F3AP84243 RPL21P38-201ENST00000418090 167 ntBASIC-0.69□□□□□ -2.52
H3F3AP84243 MTND3P16-201ENST00000452205 344 ntBASIC-0.69□□□□□ -2.52
H3F3AP84243 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.69□□□□□ -2.52
H3F3AP84243 RNU6-897P-201ENST00000517135 105 ntBASIC-0.69□□□□□ -2.52
H3F3AP84243 MIR5589-201ENST00000579442 60 ntBASIC-0.69□□□□□ -2.52
H3F3AP84243 MIR4802-201ENST00000581881 80 ntBASIC-0.69□□□□□ -2.52
H3F3AP84243 AC040904.1-201ENST00000590850 223 ntBASIC-0.69□□□□□ -2.52
H3F3AP84243 FTX_2.1-201ENST00000618816 94 ntBASIC-0.69□□□□□ -2.52
H3F3AP84243 AC134878.1-201ENST00000619901 243 ntBASIC-0.69□□□□□ -2.52
H3F3AP84243 AC244669.1-204ENST00000621564 178 ntBASIC-0.69□□□□□ -2.52
H3F3AP84243 AL391262.2-201ENST00000622466 494 ntBASIC-0.69□□□□□ -2.52
H3F3AP84243 AL162726.3-218ENST00000636401 95 ntBASIC-0.69□□□□□ -2.52
H3F3AP84243 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.69□□□□□ -2.52
H3F3AP84243 ZNF299P-201ENST00000406845 1804 ntBASIC-0.7□□□□□ -2.52
H3F3AP84243 SNORA24-201ENST00000384096 131 ntBASIC-0.7□□□□□ -2.52
H3F3AP84243 RNU6-767P-201ENST00000384132 107 ntBASIC-0.7□□□□□ -2.52
H3F3AP84243 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.7□□□□□ -2.52
H3F3AP84243 SNORA32.3-201ENST00000384772 121 ntBASIC-0.7□□□□□ -2.52
H3F3AP84243 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.7□□□□□ -2.52
H3F3AP84243 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.7□□□□□ -2.52
H3F3AP84243 AC006600.1-201ENST00000572529 153 ntBASIC-0.7□□□□□ -2.52
H3F3AP84243 MIR3915-201ENST00000578518 97 ntBASIC-0.7□□□□□ -2.52
H3F3AP84243 MIR548AD-201ENST00000584780 82 ntBASIC-0.7□□□□□ -2.52
H3F3AP84243 AC087685.1-201ENST00000587507 141 ntBASIC-0.7□□□□□ -2.52
H3F3AP84243 SNORA70.25-201ENST00000612741 95 ntBASIC-0.7□□□□□ -2.52
H3F3AP84243 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.7□□□□□ -2.52
H3F3AP84243 MIR101-1-201ENST00000362265 75 ntBASIC-0.71□□□□□ -2.52
H3F3AP84243 RNY1P16-201ENST00000363063 111 ntBASIC-0.71□□□□□ -2.52
H3F3AP84243 Y_RNA.169-201ENST00000363745 96 ntBASIC-0.71□□□□□ -2.52
H3F3AP84243 RNU6-595P-201ENST00000363944 107 ntBASIC-0.71□□□□□ -2.52
H3F3AP84243 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.71□□□□□ -2.52
H3F3AP84243 MIR563-201ENST00000385080 79 ntBASIC-0.71□□□□□ -2.52
H3F3AP84243 MIR514A2-201ENST00000385131 88 ntBASIC-0.71□□□□□ -2.52
H3F3AP84243 MIR514A3-201ENST00000385132 88 ntBASIC-0.71□□□□□ -2.52
H3F3AP84243 SNORD93-201ENST00000408813 74 ntBASIC-0.71□□□□□ -2.52
H3F3AP84243 RNU4-83P-201ENST00000410863 133 ntBASIC-0.71□□□□□ -2.52
H3F3AP84243 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.71□□□□□ -2.52
H3F3AP84243 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.71□□□□□ -2.52
H3F3AP84243 SNORA40.9-201ENST00000515895 93 ntBASIC-0.71□□□□□ -2.52
H3F3AP84243 RNU6-135P-201ENST00000516769 101 ntBASIC-0.71□□□□□ -2.52
H3F3AP84243 MTND1P24-201ENST00000552175 861 ntBASIC-0.71□□□□□ -2.52
H3F3AP84243 MIR4493-201ENST00000584016 73 ntBASIC-0.71□□□□□ -2.52
H3F3AP84243 MIR8064-201ENST00000612863 90 ntBASIC-0.71□□□□□ -2.52
H3F3AP84243 AC097520.1-201ENST00000624435 385 ntBASIC-0.71□□□□□ -2.52
H3F3AP84243 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.72□□□□□ -2.52
H3F3AP84243 RNU6-1103P-201ENST00000384150 107 ntBASIC-0.72□□□□□ -2.52
H3F3AP84243 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.72□□□□□ -2.52
H3F3AP84243 MT-TF-201ENST00000387314 71 ntBASIC-0.72□□□□□ -2.52
H3F3AP84243 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.72□□□□□ -2.52
H3F3AP84243 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.72□□□□□ -2.52
H3F3AP84243 RNU2-12P-201ENST00000517216 168 ntBASIC-0.72□□□□□ -2.52
H3F3AP84243 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-0.72□□□□□ -2.52
H3F3AP84243 AL133255.1-201ENST00000606374 441 ntBASIC-0.72□□□□□ -2.52
H3F3AP84243 JPX_2.1-201ENST00000614161 69 ntBASIC-0.72□□□□□ -2.52
H3F3AP84243 AP000720.1-201ENST00000625091 483 ntBASIC-0.72□□□□□ -2.52
H3F3AP84243 MIR30D-201ENST00000362283 70 ntBASIC-0.73□□□□□ -2.53
H3F3AP84243 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.73□□□□□ -2.53
H3F3AP84243 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.73□□□□□ -2.53
H3F3AP84243 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.73□□□□□ -2.53
H3F3AP84243 RNU6-522P-201ENST00000364497 107 ntBASIC-0.73□□□□□ -2.53
H3F3AP84243 SNORA69-201ENST00000383895 132 ntBASIC-0.73□□□□□ -2.53
H3F3AP84243 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.73□□□□□ -2.53
H3F3AP84243 SNORA26.8-201ENST00000391306 124 ntBASIC-0.73□□□□□ -2.53
H3F3AP84243 AL031003.1-201ENST00000404229 172 ntBASIC-0.73□□□□□ -2.53
H3F3AP84243 RNA5SP118-201ENST00000410385 109 ntBASIC-0.73□□□□□ -2.53
H3F3AP84243 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-0.73□□□□□ -2.53
H3F3AP84243 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.73□□□□□ -2.53
H3F3AP84243 MTATP6P26-201ENST00000445926 662 ntBASIC-0.73□□□□□ -2.53
H3F3AP84243 MTND2P39-201ENST00000457230 764 ntBASIC-0.73□□□□□ -2.53
H3F3AP84243 RNU7-67P-201ENST00000459003 62 ntBASIC-0.73□□□□□ -2.53
H3F3AP84243 snoU13.2-201ENST00000459201 104 ntBASIC-0.73□□□□□ -2.53
H3F3AP84243 AC107297.1-201ENST00000459991 176 ntBASIC-0.73□□□□□ -2.53
H3F3AP84243 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.73□□□□□ -2.53
H3F3AP84243 uc_338.36-201ENST00000622331 158 ntBASIC-0.73□□□□□ -2.53
H3F3AP84243 SNORA75.4-201ENST00000391278 119 ntBASIC-0.74□□□□□ -2.53
H3F3AP84243 HMGN1P33-201ENST00000432945 451 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms