Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
HERVK_113P62684 SNORA1B-201ENST00000362535 133 ntBASIC2.47□□□□□ -2.01
HERVK_113P62684 Y_RNA.91-201ENST00000363042 107 ntBASIC2.47□□□□□ -2.01
HERVK_113P62684 RNU6-81P-201ENST00000365608 104 ntBASIC2.47□□□□□ -2.01
HERVK_113P62684 RNU6-1336P-201ENST00000383886 109 ntBASIC2.47□□□□□ -2.01
HERVK_113P62684 MIR597-201ENST00000384968 97 ntBASIC2.47□□□□□ -2.01
HERVK_113P62684 RNU11-3P-201ENST00000391111 133 ntBASIC2.47□□□□□ -2.01
HERVK_113P62684 RNU6-257P-201ENST00000410238 98 ntBASIC2.47□□□□□ -2.01
HERVK_113P62684 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.47□□□□□ -2.01
HERVK_113P62684 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.47□□□□□ -2.01
HERVK_113P62684 AL049830.1-201ENST00000468034 425 ntBASIC2.47□□□□□ -2.01
HERVK_113P62684 RPS26P45-201ENST00000471748 340 ntBASIC2.47□□□□□ -2.01
HERVK_113P62684 RNU6-295P-201ENST00000516901 104 ntBASIC2.47□□□□□ -2.01
HERVK_113P62684 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.47□□□□□ -2.01
HERVK_113P62684 MIR3646-201ENST00000578301 84 ntBASIC2.47□□□□□ -2.01
HERVK_113P62684 AC120024.3-201ENST00000603167 156 ntBASIC2.47□□□□□ -2.01
HERVK_113P62684 AC022217.4-201ENST00000604389 163 ntBASIC2.47□□□□□ -2.01
HERVK_113P62684 AL049779.4-201ENST00000604500 156 ntBASIC2.47□□□□□ -2.01
HERVK_113P62684 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.47□□□□□ -2.01
HERVK_113P62684 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.47□□□□□ -2.01
HERVK_113P62684 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.47□□□□□ -2.01
HERVK_113P62684 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HERVK_113P62684 SNORA67.1-201ENST00000364749 141 ntBASIC2.46□□□□□ -2.02
HERVK_113P62684 Y_RNA.634-201ENST00000364811 113 ntBASIC2.46□□□□□ -2.02
HERVK_113P62684 SNORA40-201ENST00000388090 126 ntBASIC2.46□□□□□ -2.02
HERVK_113P62684 Y_RNA.586-201ENST00000391146 98 ntBASIC2.46□□□□□ -2.02
HERVK_113P62684 NDUFA4P2-201ENST00000489989 244 ntBASIC2.46□□□□□ -2.02
HERVK_113P62684 AC090142.3-201ENST00000519012 385 ntBASIC2.46□□□□□ -2.02
HERVK_113P62684 AP002004.2-201ENST00000531656 154 ntBASIC2.46□□□□□ -2.02
HERVK_113P62684 AL591926.4-201ENST00000616895 298 ntBASIC2.46□□□□□ -2.02
HERVK_113P62684 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.46□□□□□ -2.02
HERVK_113P62684 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HERVK_113P62684 SNORD68-201ENST00000363214 84 ntBASIC2.45□□□□□ -2.02
HERVK_113P62684 Y_RNA.420-201ENST00000384043 110 ntBASIC2.45□□□□□ -2.02
HERVK_113P62684 SNORA26-201ENST00000391286 122 ntBASIC2.45□□□□□ -2.02
HERVK_113P62684 SNORA75.5-201ENST00000391291 81 ntBASIC2.45□□□□□ -2.02
HERVK_113P62684 MIR548I2-201ENST00000408348 149 ntBASIC2.45□□□□□ -2.02
HERVK_113P62684 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.45□□□□□ -2.02
HERVK_113P62684 RNA5SP458-201ENST00000516188 119 ntBASIC2.45□□□□□ -2.02
HERVK_113P62684 RNA5SP153-201ENST00000516498 76 ntBASIC2.45□□□□□ -2.02
HERVK_113P62684 AL358944.1-201ENST00000528537 144 ntBASIC2.45□□□□□ -2.02
HERVK_113P62684 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.45□□□□□ -2.02
HERVK_113P62684 MIR5094-201ENST00000578766 85 ntBASIC2.45□□□□□ -2.02
HERVK_113P62684 AC005786.1-201ENST00000588553 154 ntBASIC2.45□□□□□ -2.02
HERVK_113P62684 AC022513.1-201ENST00000624512 117 ntBASIC2.45□□□□□ -2.02
HERVK_113P62684 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HERVK_113P62684 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HERVK_113P62684 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HERVK_113P62684 SNORA3A-201ENST00000364113 130 ntBASIC2.44□□□□□ -2.02
HERVK_113P62684 SNORA25.7-201ENST00000364375 127 ntBASIC2.44□□□□□ -2.02
HERVK_113P62684 RNU6-1082P-201ENST00000364574 107 ntBASIC2.44□□□□□ -2.02
HERVK_113P62684 SNORD113-1-201ENST00000365321 69 ntBASIC2.44□□□□□ -2.02
HERVK_113P62684 RNA5SP109-201ENST00000391010 116 ntBASIC2.44□□□□□ -2.02
HERVK_113P62684 SNORA48.3-201ENST00000391081 134 ntBASIC2.44□□□□□ -2.02
HERVK_113P62684 RNU6-460P-201ENST00000391158 108 ntBASIC2.44□□□□□ -2.02
HERVK_113P62684 SNORA26.9-201ENST00000391322 122 ntBASIC2.44□□□□□ -2.02
HERVK_113P62684 AC245047.3-201ENST00000429428 127 ntBASIC2.44□□□□□ -2.02
HERVK_113P62684 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.44□□□□□ -2.02
HERVK_113P62684 Y_RNA.714-201ENST00000517065 90 ntBASIC2.44□□□□□ -2.02
HERVK_113P62684 MIR4662B-201ENST00000579498 81 ntBASIC2.44□□□□□ -2.02
HERVK_113P62684 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
HERVK_113P62684 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
HERVK_113P62684 ICE2P2-201ENST00000483823 2787 ntBASIC2.44□□□□□ -2.02
HERVK_113P62684 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
HERVK_113P62684 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.43□□□□□ -2.02
HERVK_113P62684 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HERVK_113P62684 RNU6-1138P-201ENST00000365359 106 ntBASIC2.43□□□□□ -2.02
HERVK_113P62684 RNU6-597P-201ENST00000365620 102 ntBASIC2.43□□□□□ -2.02
HERVK_113P62684 Y_RNA.486-201ENST00000384398 107 ntBASIC2.43□□□□□ -2.02
HERVK_113P62684 RNU6-1117P-201ENST00000384525 104 ntBASIC2.43□□□□□ -2.02
HERVK_113P62684 MIR524-201ENST00000385242 87 ntBASIC2.43□□□□□ -2.02
HERVK_113P62684 MTND4LP9-201ENST00000427694 174 ntBASIC2.43□□□□□ -2.02
HERVK_113P62684 AC245047.4-201ENST00000433189 144 ntBASIC2.43□□□□□ -2.02
HERVK_113P62684 AL606517.2-201ENST00000442855 241 ntBASIC2.43□□□□□ -2.02
HERVK_113P62684 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.43□□□□□ -2.02
HERVK_113P62684 AC092991.1-201ENST00000477176 376 ntBASIC2.43□□□□□ -2.02
HERVK_113P62684 MRPS17P9-201ENST00000511924 393 ntBASIC2.43□□□□□ -2.02
HERVK_113P62684 RNA5SP137-201ENST00000516833 135 ntBASIC2.43□□□□□ -2.02
HERVK_113P62684 RNU6-365P-201ENST00000517113 106 ntBASIC2.43□□□□□ -2.02
HERVK_113P62684 AL160236.1-201ENST00000556317 195 ntBASIC2.43□□□□□ -2.02
HERVK_113P62684 MIR548AI-201ENST00000579940 88 ntBASIC2.43□□□□□ -2.02
HERVK_113P62684 AC245884.12-201ENST00000615364 59 ntBASIC2.43□□□□□ -2.02
HERVK_113P62684 RNU6-978P-201ENST00000364371 103 ntBASIC2.42□□□□□ -2.02
HERVK_113P62684 Y_RNA.265-201ENST00000364677 108 ntBASIC2.42□□□□□ -2.02
HERVK_113P62684 Y_RNA.291-201ENST00000364886 113 ntBASIC2.42□□□□□ -2.02
HERVK_113P62684 Y_RNA.542-201ENST00000384641 111 ntBASIC2.42□□□□□ -2.02
HERVK_113P62684 RNU6-959P-201ENST00000384671 107 ntBASIC2.42□□□□□ -2.02
HERVK_113P62684 MIR802-201ENST00000390235 94 ntBASIC2.42□□□□□ -2.02
HERVK_113P62684 SNORD72-201ENST00000390994 80 ntBASIC2.42□□□□□ -2.02
HERVK_113P62684 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
HERVK_113P62684 AC069114.2-201ENST00000604699 304 ntBASIC2.42□□□□□ -2.02
HERVK_113P62684 MIR6845-201ENST00000613182 61 ntBASIC2.42□□□□□ -2.02
HERVK_113P62684 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.42□□□□□ -2.02
HERVK_113P62684 MIRLET7G-201ENST00000362280 84 ntBASIC2.41□□□□□ -2.02
HERVK_113P62684 RNY1P11-201ENST00000363759 113 ntBASIC2.41□□□□□ -2.02
HERVK_113P62684 RNU7-197P-201ENST00000458836 62 ntBASIC2.41□□□□□ -2.02
HERVK_113P62684 RNU6-1211P-201ENST00000459179 105 ntBASIC2.41□□□□□ -2.02
HERVK_113P62684 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.41□□□□□ -2.02
HERVK_113P62684 RNU6-126P-201ENST00000516685 103 ntBASIC2.41□□□□□ -2.02
HERVK_113P62684 RNU6-971P-201ENST00000516920 106 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms