Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RNU7-172P-201ENST00000517125 64 ntBASIC1.55□□□□□ -2.16
LMO4P61968 MIR4299-201ENST00000577899 72 ntBASIC1.55□□□□□ -2.16
LMO4P61968 AL929325.1-201ENST00000603096 117 ntBASIC1.55□□□□□ -2.16
LMO4P61968 AC091895.1-201ENST00000624494 256 ntBASIC1.55□□□□□ -2.16
LMO4P61968 AC245060.5-201ENST00000610778 3293 ntBASIC1.55□□□□□ -2.16
LMO4P61968 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
LMO4P61968 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
LMO4P61968 SNORD45.3-201ENST00000363836 72 ntBASIC1.54□□□□□ -2.16
LMO4P61968 RNU4-41P-201ENST00000364426 143 ntBASIC1.54□□□□□ -2.16
LMO4P61968 Y_RNA.337-201ENST00000365312 102 ntBASIC1.54□□□□□ -2.16
LMO4P61968 RNU6-728P-201ENST00000365375 104 ntBASIC1.54□□□□□ -2.16
LMO4P61968 MIR9-3-201ENST00000385084 90 ntBASIC1.54□□□□□ -2.16
LMO4P61968 RNU6-257P-201ENST00000410238 98 ntBASIC1.54□□□□□ -2.16
LMO4P61968 RNU4-43P-201ENST00000410628 137 ntBASIC1.54□□□□□ -2.16
LMO4P61968 Y_RNA.622-201ENST00000411091 108 ntBASIC1.54□□□□□ -2.16
LMO4P61968 AC010154.1-201ENST00000425857 269 ntBASIC1.54□□□□□ -2.16
LMO4P61968 HMGN2P34-201ENST00000437647 269 ntBASIC1.54□□□□□ -2.16
LMO4P61968 RNA5SP57-201ENST00000459463 123 ntBASIC1.54□□□□□ -2.16
LMO4P61968 MIR548X2-201ENST00000579776 100 ntBASIC1.54□□□□□ -2.16
LMO4P61968 AL627230.6-201ENST00000611129 280 ntBASIC1.54□□□□□ -2.16
LMO4P61968 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.54□□□□□ -2.16
LMO4P61968 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
LMO4P61968 RNY3P5-201ENST00000384127 102 ntBASIC1.53□□□□□ -2.16
LMO4P61968 RNU6-959P-201ENST00000384671 107 ntBASIC1.53□□□□□ -2.16
LMO4P61968 RNU6-768P-201ENST00000384683 107 ntBASIC1.53□□□□□ -2.16
LMO4P61968 RNU6-376P-201ENST00000384731 106 ntBASIC1.53□□□□□ -2.16
LMO4P61968 MIR676-201ENST00000390702 67 ntBASIC1.53□□□□□ -2.16
LMO4P61968 Y_RNA.587-201ENST00000391210 103 ntBASIC1.53□□□□□ -2.16
LMO4P61968 MIR1253-201ENST00000408273 105 ntBASIC1.53□□□□□ -2.16
LMO4P61968 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
LMO4P61968 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
LMO4P61968 AC244636.1-201ENST00000421152 228 ntBASIC1.53□□□□□ -2.16
LMO4P61968 HMGN2P19-201ENST00000425149 265 ntBASIC1.53□□□□□ -2.16
LMO4P61968 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.53□□□□□ -2.16
LMO4P61968 AC011406.1-201ENST00000512440 370 ntBASIC1.53□□□□□ -2.16
LMO4P61968 RNU7-128P-201ENST00000517247 62 ntBASIC1.53□□□□□ -2.16
LMO4P61968 U6.73-201ENST00000619194 103 ntBASIC1.53□□□□□ -2.16
LMO4P61968 AC100821.1-201ENST00000523153 2479 ntBASIC1.52□□□□□ -2.17
LMO4P61968 AC010332.2-201ENST00000613083 1904 ntBASIC1.52□□□□□ -2.17
LMO4P61968 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.52□□□□□ -2.17
LMO4P61968 snoU2-30.2-201ENST00000362805 70 ntBASIC1.52□□□□□ -2.17
LMO4P61968 RNY1P11-201ENST00000363759 113 ntBASIC1.52□□□□□ -2.17
LMO4P61968 Y_RNA.203-201ENST00000364106 102 ntBASIC1.52□□□□□ -2.17
LMO4P61968 RNA5SP493-201ENST00000364115 91 ntBASIC1.52□□□□□ -2.17
LMO4P61968 RNU1-96P-201ENST00000364163 162 ntBASIC1.52□□□□□ -2.17
LMO4P61968 RNA5SP37-201ENST00000365420 130 ntBASIC1.52□□□□□ -2.17
LMO4P61968 RNU6-1117P-201ENST00000384525 104 ntBASIC1.52□□□□□ -2.17
LMO4P61968 SNORA8-201ENST00000384574 139 ntBASIC1.52□□□□□ -2.17
LMO4P61968 SNORA20-201ENST00000384662 132 ntBASIC1.52□□□□□ -2.17
LMO4P61968 RNU6-417P-201ENST00000384712 107 ntBASIC1.52□□□□□ -2.17
LMO4P61968 RNA5SP496-201ENST00000391240 109 ntBASIC1.52□□□□□ -2.17
LMO4P61968 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.52□□□□□ -2.17
LMO4P61968 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.52□□□□□ -2.17
LMO4P61968 SNRPGP8-201ENST00000454064 226 ntBASIC1.52□□□□□ -2.17
LMO4P61968 RNU7-197P-201ENST00000458836 62 ntBASIC1.52□□□□□ -2.17
LMO4P61968 AC079804.2-201ENST00000490376 200 ntBASIC1.52□□□□□ -2.17
LMO4P61968 AC090255.1-201ENST00000495779 349 ntBASIC1.52□□□□□ -2.17
LMO4P61968 RPS29P11-201ENST00000496507 171 ntBASIC1.52□□□□□ -2.17
LMO4P61968 MRPS17P9-201ENST00000511924 393 ntBASIC1.52□□□□□ -2.17
LMO4P61968 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.52□□□□□ -2.17
LMO4P61968 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.52□□□□□ -2.17
LMO4P61968 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.52□□□□□ -2.17
LMO4P61968 AL049861.1-201ENST00000603130 150 ntBASIC1.52□□□□□ -2.17
LMO4P61968 AC073413.2-201ENST00000604332 360 ntBASIC1.52□□□□□ -2.17
LMO4P61968 AL773524.1-201ENST00000614065 229 ntBASIC1.52□□□□□ -2.17
LMO4P61968 AC084768.2-201ENST00000622736 221 ntBASIC1.52□□□□□ -2.17
LMO4P61968 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.52□□□□□ -2.17
LMO4P61968 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.52□□□□□ -2.17
LMO4P61968 AL359851.1-201ENST00000569460 4997 ntBASIC1.51□□□□□ -2.17
LMO4P61968 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
LMO4P61968 RNU6-199P-201ENST00000362954 107 ntBASIC1.51□□□□□ -2.17
LMO4P61968 SNORA33-201ENST00000363664 130 ntBASIC1.51□□□□□ -2.17
LMO4P61968 SNORD114-6-201ENST00000364393 72 ntBASIC1.51□□□□□ -2.17
LMO4P61968 Y_RNA.393-201ENST00000383936 102 ntBASIC1.51□□□□□ -2.17
LMO4P61968 RNU6-484P-201ENST00000384016 107 ntBASIC1.51□□□□□ -2.17
LMO4P61968 SNORD37.2-201ENST00000391075 66 ntBASIC1.51□□□□□ -2.17
LMO4P61968 RNA5SP212-201ENST00000391223 107 ntBASIC1.51□□□□□ -2.17
LMO4P61968 MIR513C-201ENST00000401352 84 ntBASIC1.51□□□□□ -2.17
LMO4P61968 RNU6-1186P-201ENST00000410429 97 ntBASIC1.51□□□□□ -2.17
LMO4P61968 RNA5SP501-201ENST00000410990 112 ntBASIC1.51□□□□□ -2.17
LMO4P61968 RPL30P13-201ENST00000418873 348 ntBASIC1.51□□□□□ -2.17
LMO4P61968 RPS27P1-201ENST00000450552 247 ntBASIC1.51□□□□□ -2.17
LMO4P61968 RNU1-131P-201ENST00000458943 161 ntBASIC1.51□□□□□ -2.17
LMO4P61968 RNU6-717P-201ENST00000459076 104 ntBASIC1.51□□□□□ -2.17
LMO4P61968 SNORD11-201ENST00000459124 84 ntBASIC1.51□□□□□ -2.17
LMO4P61968 RNA5SP458-201ENST00000516188 119 ntBASIC1.51□□□□□ -2.17
LMO4P61968 RNU6-1041P-201ENST00000516254 102 ntBASIC1.51□□□□□ -2.17
LMO4P61968 RNU6-1096P-201ENST00000517089 102 ntBASIC1.51□□□□□ -2.17
LMO4P61968 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.51□□□□□ -2.17
LMO4P61968 AC011604.1-201ENST00000545978 196 ntBASIC1.51□□□□□ -2.17
LMO4P61968 AC112693.2-201ENST00000556538 232 ntBASIC1.51□□□□□ -2.17
LMO4P61968 RPL23AP91-201ENST00000569211 455 ntBASIC1.51□□□□□ -2.17
LMO4P61968 MIR3683-201ENST00000580847 82 ntBASIC1.51□□□□□ -2.17
LMO4P61968 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
LMO4P61968 RNU6-1209P-201ENST00000363655 107 ntBASIC1.5□□□□□ -2.17
LMO4P61968 Y_RNA.796-201ENST00000364268 102 ntBASIC1.5□□□□□ -2.17
LMO4P61968 Y_RNA.799-201ENST00000364992 102 ntBASIC1.5□□□□□ -2.17
LMO4P61968 Y_RNA.420-201ENST00000384043 110 ntBASIC1.5□□□□□ -2.17
LMO4P61968 RNU6-22P-201ENST00000384355 107 ntBASIC1.5□□□□□ -2.17
LMO4P61968 RNU6-1081P-201ENST00000384537 107 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms