Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 HMGN2P38-201ENST00000423806 265 ntBASIC1.87□□□□□ -2.11
SUMO3P55854 HMGN2P32-201ENST00000444648 269 ntBASIC1.87□□□□□ -2.11
SUMO3P55854 Y_RNA.644-201ENST00000459006 113 ntBASIC1.87□□□□□ -2.11
SUMO3P55854 AC090255.1-201ENST00000495779 349 ntBASIC1.87□□□□□ -2.11
SUMO3P55854 AC114811.1-201ENST00000507207 168 ntBASIC1.87□□□□□ -2.11
SUMO3P55854 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.87□□□□□ -2.11
SUMO3P55854 SCARNA8-201ENST00000515924 131 ntBASIC1.87□□□□□ -2.11
SUMO3P55854 Y_RNA.674-201ENST00000516362 113 ntBASIC1.87□□□□□ -2.11
SUMO3P55854 MIR3198-2-201ENST00000577868 80 ntBASIC1.87□□□□□ -2.11
SUMO3P55854 MIR4308-201ENST00000580634 81 ntBASIC1.87□□□□□ -2.11
SUMO3P55854 Y_RNA.238-201ENST00000364441 102 ntBASIC1.86□□□□□ -2.11
SUMO3P55854 RNU6-1138P-201ENST00000365359 106 ntBASIC1.86□□□□□ -2.11
SUMO3P55854 RNU4-52P-201ENST00000384209 138 ntBASIC1.86□□□□□ -2.11
SUMO3P55854 SNORA64-201ENST00000384674 134 ntBASIC1.86□□□□□ -2.11
SUMO3P55854 MT-TT-201ENST00000387460 66 ntBASIC1.86□□□□□ -2.11
SUMO3P55854 PIGPP3-201ENST00000425307 415 ntBASIC1.86□□□□□ -2.11
SUMO3P55854 AL021397.1-201ENST00000451806 248 ntBASIC1.86□□□□□ -2.11
SUMO3P55854 AC245047.8-201ENST00000456455 284 ntBASIC1.86□□□□□ -2.11
SUMO3P55854 SNORD77.4-201ENST00000516158 81 ntBASIC1.86□□□□□ -2.11
SUMO3P55854 RNU7-149P-201ENST00000516739 59 ntBASIC1.86□□□□□ -2.11
SUMO3P55854 RNU1-40P-201ENST00000516816 164 ntBASIC1.86□□□□□ -2.11
SUMO3P55854 RNU6-453P-201ENST00000516819 85 ntBASIC1.86□□□□□ -2.11
SUMO3P55854 RNU1-97P-201ENST00000516872 164 ntBASIC1.86□□□□□ -2.11
SUMO3P55854 IGKV3-31-201ENST00000523109 329 ntBASIC1.86□□□□□ -2.11
SUMO3P55854 CBX3P4-201ENST00000538909 354 ntBASIC1.86□□□□□ -2.11
SUMO3P55854 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.86□□□□□ -2.11
SUMO3P55854 MIR4662B-201ENST00000579498 81 ntBASIC1.86□□□□□ -2.11
SUMO3P55854 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
SUMO3P55854 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SUMO3P55854 RNU6-1020P-201ENST00000363684 107 ntBASIC1.85□□□□□ -2.11
SUMO3P55854 SNORD14E-201ENST00000364009 85 ntBASIC1.85□□□□□ -2.11
SUMO3P55854 Y_RNA.435-201ENST00000384095 112 ntBASIC1.85□□□□□ -2.11
SUMO3P55854 Y_RNA.785-201ENST00000384290 109 ntBASIC1.85□□□□□ -2.11
SUMO3P55854 Y_RNA.571-201ENST00000384753 98 ntBASIC1.85□□□□□ -2.11
SUMO3P55854 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
SUMO3P55854 RNU6-918P-201ENST00000391219 106 ntBASIC1.85□□□□□ -2.11
SUMO3P55854 AL606845.1-201ENST00000404881 255 ntBASIC1.85□□□□□ -2.11
SUMO3P55854 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.85□□□□□ -2.11
SUMO3P55854 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.85□□□□□ -2.11
SUMO3P55854 snoU13.9-201ENST00000458927 103 ntBASIC1.85□□□□□ -2.11
SUMO3P55854 RPL23AP94-201ENST00000512518 302 ntBASIC1.85□□□□□ -2.11
SUMO3P55854 RNU6-126P-201ENST00000516685 103 ntBASIC1.85□□□□□ -2.11
SUMO3P55854 MIR4648-201ENST00000580107 72 ntBASIC1.85□□□□□ -2.11
SUMO3P55854 MIR4744-201ENST00000581563 82 ntBASIC1.85□□□□□ -2.11
SUMO3P55854 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SUMO3P55854 U8.2-201ENST00000363156 134 ntBASIC1.84□□□□□ -2.11
SUMO3P55854 RNU6-442P-201ENST00000383968 104 ntBASIC1.84□□□□□ -2.11
SUMO3P55854 SNORA70B-201ENST00000384210 135 ntBASIC1.84□□□□□ -2.11
SUMO3P55854 MIR513A1-201ENST00000385138 129 ntBASIC1.84□□□□□ -2.11
SUMO3P55854 MIR802-201ENST00000390235 94 ntBASIC1.84□□□□□ -2.11
SUMO3P55854 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.84□□□□□ -2.11
SUMO3P55854 AL445646.1-201ENST00000431784 216 ntBASIC1.84□□□□□ -2.11
SUMO3P55854 AC008834.1-201ENST00000511612 175 ntBASIC1.84□□□□□ -2.11
SUMO3P55854 SUMO2P16-201ENST00000519475 264 ntBASIC1.84□□□□□ -2.11
SUMO3P55854 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.84□□□□□ -2.11
SUMO3P55854 AC015688.6-201ENST00000577737 104 ntBASIC1.84□□□□□ -2.11
SUMO3P55854 Pinc.1-201ENST00000616452 154 ntBASIC1.84□□□□□ -2.11
SUMO3P55854 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.84□□□□□ -2.11
SUMO3P55854 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.84□□□□□ -2.12
SUMO3P55854 ICE2P2-201ENST00000483823 2787 ntBASIC1.83□□□□□ -2.12
SUMO3P55854 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SUMO3P55854 Y_RNA.29-201ENST00000362570 113 ntBASIC1.83□□□□□ -2.12
SUMO3P55854 RNU4-70P-201ENST00000384579 139 ntBASIC1.83□□□□□ -2.12
SUMO3P55854 RNU2-2P-201ENST00000410396 191 ntBASIC1.83□□□□□ -2.12
SUMO3P55854 RNA5SP489-201ENST00000410986 109 ntBASIC1.83□□□□□ -2.12
SUMO3P55854 Y_RNA.793-201ENST00000411222 111 ntBASIC1.83□□□□□ -2.12
SUMO3P55854 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SUMO3P55854 AC093850.1-201ENST00000454121 251 ntBASIC1.83□□□□□ -2.12
SUMO3P55854 RNU6-717P-201ENST00000459076 104 ntBASIC1.83□□□□□ -2.12
SUMO3P55854 AC079804.2-201ENST00000490376 200 ntBASIC1.83□□□□□ -2.12
SUMO3P55854 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.83□□□□□ -2.12
SUMO3P55854 DEFB122-202ENST00000569013 197 ntBASIC1.83□□□□□ -2.12
SUMO3P55854 MIR4778-201ENST00000577635 80 ntBASIC1.83□□□□□ -2.12
SUMO3P55854 AC002984.1-201ENST00000591692 448 ntBASIC1.83□□□□□ -2.12
SUMO3P55854 RNU2-4P-201ENST00000606190 192 ntBASIC1.83□□□□□ -2.12
SUMO3P55854 RNU6-199P-201ENST00000362954 107 ntBASIC1.82□□□□□ -2.12
SUMO3P55854 RNU6-47P-201ENST00000383866 107 ntBASIC1.82□□□□□ -2.12
SUMO3P55854 SNORD72-201ENST00000390994 80 ntBASIC1.82□□□□□ -2.12
SUMO3P55854 AL023284.1-201ENST00000403956 276 ntBASIC1.82□□□□□ -2.12
SUMO3P55854 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.82□□□□□ -2.12
SUMO3P55854 SNRPGP8-201ENST00000454064 226 ntBASIC1.82□□□□□ -2.12
SUMO3P55854 AC005908.1-201ENST00000468701 347 ntBASIC1.82□□□□□ -2.12
SUMO3P55854 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.82□□□□□ -2.12
SUMO3P55854 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.82□□□□□ -2.12
SUMO3P55854 RNA5SP160-201ENST00000364866 120 ntBASIC1.81□□□□□ -2.12
SUMO3P55854 RNA5SP126-201ENST00000365092 109 ntBASIC1.81□□□□□ -2.12
SUMO3P55854 RNU6-728P-201ENST00000365375 104 ntBASIC1.81□□□□□ -2.12
SUMO3P55854 RNA5SP259-201ENST00000365541 109 ntBASIC1.81□□□□□ -2.12
SUMO3P55854 MIR452-201ENST00000385020 85 ntBASIC1.81□□□□□ -2.12
SUMO3P55854 RNU6-578P-201ENST00000390980 103 ntBASIC1.81□□□□□ -2.12
SUMO3P55854 RN7SKP51-201ENST00000410781 304 ntBASIC1.81□□□□□ -2.12
SUMO3P55854 Y_RNA.797-201ENST00000515977 94 ntBASIC1.81□□□□□ -2.12
SUMO3P55854 RNU6-1299P-201ENST00000516316 100 ntBASIC1.81□□□□□ -2.12
SUMO3P55854 SNORA81.3-201ENST00000517283 198 ntBASIC1.81□□□□□ -2.12
SUMO3P55854 AC072026.1-201ENST00000605023 201 ntBASIC1.81□□□□□ -2.12
SUMO3P55854 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.81□□□□□ -2.12
SUMO3P55854 AC006441.5-201ENST00000612680 209 ntBASIC1.81□□□□□ -2.12
SUMO3P55854 MIR302D-201ENST00000362275 68 ntBASIC1.8□□□□□ -2.12
SUMO3P55854 SNORD33-201ENST00000362761 85 ntBASIC1.8□□□□□ -2.12
SUMO3P55854 RNU6-457P-201ENST00000363999 107 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 153.4 ms