Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 MIR4255-201ENST00000579351 72 ntBASIC1.44□□□□□ -2.18
CDH11P55287 AC011921.3-201ENST00000605540 361 ntBASIC1.44□□□□□ -2.18
CDH11P55287 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.44□□□□□ -2.18
CDH11P55287 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.43□□□□□ -2.18
CDH11P55287 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.43□□□□□ -2.18
CDH11P55287 MIR378A-201ENST00000362177 66 ntBASIC1.43□□□□□ -2.18
CDH11P55287 RNU6-702P-201ENST00000364982 107 ntBASIC1.43□□□□□ -2.18
CDH11P55287 Y_RNA.350-201ENST00000365409 98 ntBASIC1.43□□□□□ -2.18
CDH11P55287 RNU6-338P-201ENST00000383888 105 ntBASIC1.43□□□□□ -2.18
CDH11P55287 RNU6-144P-201ENST00000383951 107 ntBASIC1.43□□□□□ -2.18
CDH11P55287 Y_RNA.539-201ENST00000384635 107 ntBASIC1.43□□□□□ -2.18
CDH11P55287 MIR660-201ENST00000385235 97 ntBASIC1.43□□□□□ -2.18
CDH11P55287 PGBD4P5-201ENST00000445958 426 ntBASIC1.43□□□□□ -2.18
CDH11P55287 RNU6-437P-201ENST00000459408 95 ntBASIC1.43□□□□□ -2.18
CDH11P55287 HMGN1P7-201ENST00000491722 313 ntBASIC1.43□□□□□ -2.18
CDH11P55287 SNORA44.1-201ENST00000517031 108 ntBASIC1.43□□□□□ -2.18
CDH11P55287 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.43□□□□□ -2.18
CDH11P55287 SNORD53B-201ENST00000577887 78 ntBASIC1.43□□□□□ -2.18
CDH11P55287 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CDH11P55287 AL442644.1-201ENST00000454390 3105 ntBASIC1.43□□□□□ -2.18
CDH11P55287 Y_RNA.416-201ENST00000384014 113 ntBASIC1.42□□□□□ -2.18
CDH11P55287 MIR934-201ENST00000401241 83 ntBASIC1.42□□□□□ -2.18
CDH11P55287 MIR1278-201ENST00000408753 81 ntBASIC1.42□□□□□ -2.18
CDH11P55287 Y_RNA.621-201ENST00000411065 96 ntBASIC1.42□□□□□ -2.18
CDH11P55287 RPL39P38-201ENST00000467018 153 ntBASIC1.42□□□□□ -2.18
CDH11P55287 AC023790.1-201ENST00000482174 347 ntBASIC1.42□□□□□ -2.18
CDH11P55287 RNU6-1116P-201ENST00000517269 99 ntBASIC1.42□□□□□ -2.18
CDH11P55287 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.42□□□□□ -2.18
CDH11P55287 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.42□□□□□ -2.18
CDH11P55287 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.41□□□□□ -2.18
CDH11P55287 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CDH11P55287 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CDH11P55287 Y_RNA.20-201ENST00000362479 113 ntBASIC1.41□□□□□ -2.18
CDH11P55287 Y_RNA.76-201ENST00000362931 109 ntBASIC1.41□□□□□ -2.18
CDH11P55287 RNU6-1209P-201ENST00000363655 107 ntBASIC1.41□□□□□ -2.18
CDH11P55287 SNORD1A-201ENST00000364968 72 ntBASIC1.41□□□□□ -2.18
CDH11P55287 MIR548H3-201ENST00000408771 118 ntBASIC1.41□□□□□ -2.18
CDH11P55287 RPL30P13-201ENST00000418873 348 ntBASIC1.41□□□□□ -2.18
CDH11P55287 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.41□□□□□ -2.18
CDH11P55287 SNORD11-201ENST00000459124 84 ntBASIC1.41□□□□□ -2.18
CDH11P55287 NDUFA4P2-201ENST00000489989 244 ntBASIC1.41□□□□□ -2.18
CDH11P55287 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.41□□□□□ -2.18
CDH11P55287 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.41□□□□□ -2.18
CDH11P55287 AC004817.2-201ENST00000561794 651 ntBASIC1.41□□□□□ -2.18
CDH11P55287 AL021707.8-201ENST00000609428 183 ntBASIC1.41□□□□□ -2.18
CDH11P55287 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CDH11P55287 AC027279.3-201ENST00000625055 122 ntBASIC1.41□□□□□ -2.18
CDH11P55287 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.41□□□□□ -2.18
CDH11P55287 MIR126-201ENST00000362291 85 ntBASIC1.4□□□□□ -2.19
CDH11P55287 RNU6-1205P-201ENST00000363625 106 ntBASIC1.4□□□□□ -2.19
CDH11P55287 Y_RNA.277-201ENST00000364754 102 ntBASIC1.4□□□□□ -2.19
CDH11P55287 Y_RNA.307-201ENST00000365022 117 ntBASIC1.4□□□□□ -2.19
CDH11P55287 MIR320A-201ENST00000385302 82 ntBASIC1.4□□□□□ -2.19
CDH11P55287 MIR526A2-201ENST00000390198 65 ntBASIC1.4□□□□□ -2.19
CDH11P55287 SNRPGP10-201ENST00000432323 225 ntBASIC1.4□□□□□ -2.19
CDH11P55287 snoU13.9-201ENST00000458927 103 ntBASIC1.4□□□□□ -2.19
CDH11P55287 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.4□□□□□ -2.19
CDH11P55287 MIR5688-201ENST00000580619 83 ntBASIC1.4□□□□□ -2.19
CDH11P55287 MIR4303-201ENST00000581299 66 ntBASIC1.4□□□□□ -2.19
CDH11P55287 MIR3128-201ENST00000581957 66 ntBASIC1.4□□□□□ -2.19
CDH11P55287 BX248123.2-201ENST00000606318 124 ntBASIC1.4□□□□□ -2.19
CDH11P55287 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CDH11P55287 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CDH11P55287 SNORD68-201ENST00000363214 84 ntBASIC1.39□□□□□ -2.19
CDH11P55287 RNU6-833P-201ENST00000363486 107 ntBASIC1.39□□□□□ -2.19
CDH11P55287 RNU4-62P-201ENST00000410125 130 ntBASIC1.39□□□□□ -2.19
CDH11P55287 RN7SKP51-201ENST00000410781 304 ntBASIC1.39□□□□□ -2.19
CDH11P55287 RNU6-1023P-201ENST00000516137 106 ntBASIC1.39□□□□□ -2.19
CDH11P55287 SUMO2P16-201ENST00000519475 264 ntBASIC1.39□□□□□ -2.19
CDH11P55287 AC100767.1-201ENST00000528178 123 ntBASIC1.39□□□□□ -2.19
CDH11P55287 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.39□□□□□ -2.19
CDH11P55287 MIR4498-201ENST00000577599 66 ntBASIC1.39□□□□□ -2.19
CDH11P55287 AC120024.3-201ENST00000603167 156 ntBASIC1.39□□□□□ -2.19
CDH11P55287 BX284668.6-201ENST00000606899 438 ntBASIC1.39□□□□□ -2.19
CDH11P55287 snoU13.31-201ENST00000607291 104 ntBASIC1.39□□□□□ -2.19
CDH11P55287 ICE2P2-201ENST00000483823 2787 ntBASIC1.39□□□□□ -2.19
CDH11P55287 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CDH11P55287 RNU4-10P-201ENST00000364383 140 ntBASIC1.38□□□□□ -2.19
CDH11P55287 SNORD50B-201ENST00000364995 70 ntBASIC1.38□□□□□ -2.19
CDH11P55287 Y_RNA.447-201ENST00000384184 113 ntBASIC1.38□□□□□ -2.19
CDH11P55287 MIR513A1-201ENST00000385138 129 ntBASIC1.38□□□□□ -2.19
CDH11P55287 RNU1-78P-201ENST00000391248 165 ntBASIC1.38□□□□□ -2.19
CDH11P55287 RNU6-383P-201ENST00000410864 94 ntBASIC1.38□□□□□ -2.19
CDH11P55287 CYCTP-201ENST00000504253 315 ntBASIC1.38□□□□□ -2.19
CDH11P55287 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.38□□□□□ -2.19
CDH11P55287 RNU6-1053P-201ENST00000515930 101 ntBASIC1.38□□□□□ -2.19
CDH11P55287 SNORD116-28-201ENST00000516123 91 ntBASIC1.38□□□□□ -2.19
CDH11P55287 Y_RNA.673-201ENST00000516306 88 ntBASIC1.38□□□□□ -2.19
CDH11P55287 MIR2681-201ENST00000581814 105 ntBASIC1.38□□□□□ -2.19
CDH11P55287 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.38□□□□□ -2.19
CDH11P55287 SNORD3E-202ENST00000627253 216 ntBASIC1.38□□□□□ -2.19
CDH11P55287 RNU6-653P-201ENST00000363074 106 ntBASIC1.37□□□□□ -2.19
CDH11P55287 Y_RNA.304-201ENST00000365011 112 ntBASIC1.37□□□□□ -2.19
CDH11P55287 Y_RNA.477-201ENST00000384352 108 ntBASIC1.37□□□□□ -2.19
CDH11P55287 Y_RNA.478-201ENST00000384358 107 ntBASIC1.37□□□□□ -2.19
CDH11P55287 Y_RNA.572-201ENST00000384757 98 ntBASIC1.37□□□□□ -2.19
CDH11P55287 MIR626-201ENST00000385032 94 ntBASIC1.37□□□□□ -2.19
CDH11P55287 MIR653-201ENST00000385279 96 ntBASIC1.37□□□□□ -2.19
CDH11P55287 SNORA67.6-201ENST00000391093 99 ntBASIC1.37□□□□□ -2.19
CDH11P55287 MIR1304-201ENST00000408243 91 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 186.7 ms