Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 AL160236.1-201ENST00000556317 195 ntBASIC1.35□□□□□ -2.19
CDH8P55286 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.35□□□□□ -2.19
CDH8P55286 FAM106DP-201ENST00000586416 501 ntBASIC1.35□□□□□ -2.19
CDH8P55286 JPX_2.1-201ENST00000614161 69 ntBASIC1.35□□□□□ -2.19
CDH8P55286 RNU6-1048P-201ENST00000364054 107 ntBASIC1.34□□□□□ -2.19
CDH8P55286 SNORA36B-201ENST00000410438 131 ntBASIC1.34□□□□□ -2.19
CDH8P55286 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.34□□□□□ -2.19
CDH8P55286 MTCO1P5-201ENST00000433573 344 ntBASIC1.34□□□□□ -2.19
CDH8P55286 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.34□□□□□ -2.19
CDH8P55286 SNORD45.4-201ENST00000516629 73 ntBASIC1.34□□□□□ -2.19
CDH8P55286 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
CDH8P55286 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
CDH8P55286 snoU2_19.2-201ENST00000363024 80 ntBASIC1.33□□□□□ -2.2
CDH8P55286 SNORA53-201ENST00000391141 249 ntBASIC1.33□□□□□ -2.2
CDH8P55286 SNORA26.5-201ENST00000391215 123 ntBASIC1.33□□□□□ -2.2
CDH8P55286 MIR1298-201ENST00000408783 112 ntBASIC1.33□□□□□ -2.2
CDH8P55286 RPL21P38-201ENST00000418090 167 ntBASIC1.33□□□□□ -2.2
CDH8P55286 HMGN2P32-201ENST00000444648 269 ntBASIC1.33□□□□□ -2.2
CDH8P55286 RNU6-437P-201ENST00000459408 95 ntBASIC1.33□□□□□ -2.2
CDH8P55286 AC098869.1-201ENST00000481627 292 ntBASIC1.33□□□□□ -2.2
CDH8P55286 MRPS35P2-201ENST00000508242 191 ntBASIC1.33□□□□□ -2.2
CDH8P55286 RNU2-31P-201ENST00000516954 155 ntBASIC1.33□□□□□ -2.2
CDH8P55286 AC019288.1-201ENST00000557918 224 ntBASIC1.33□□□□□ -2.2
CDH8P55286 MIR2681-201ENST00000581814 105 ntBASIC1.33□□□□□ -2.2
CDH8P55286 AC037487.3-201ENST00000606668 112 ntBASIC1.33□□□□□ -2.2
CDH8P55286 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CDH8P55286 RNA5SP327-201ENST00000362494 101 ntBASIC1.32□□□□□ -2.2
CDH8P55286 RNU6-674P-201ENST00000363831 107 ntBASIC1.32□□□□□ -2.2
CDH8P55286 RNU6-806P-201ENST00000365147 105 ntBASIC1.32□□□□□ -2.2
CDH8P55286 Y_RNA.336-201ENST00000365307 109 ntBASIC1.32□□□□□ -2.2
CDH8P55286 RNU6-326P-201ENST00000365480 107 ntBASIC1.32□□□□□ -2.2
CDH8P55286 RNU6-969P-201ENST00000383900 105 ntBASIC1.32□□□□□ -2.2
CDH8P55286 Y_RNA.541-201ENST00000384640 113 ntBASIC1.32□□□□□ -2.2
CDH8P55286 MIR215-201ENST00000384858 110 ntBASIC1.32□□□□□ -2.2
CDH8P55286 RNU6-947P-201ENST00000516264 106 ntBASIC1.32□□□□□ -2.2
CDH8P55286 AP003733.2-201ENST00000529409 171 ntBASIC1.32□□□□□ -2.2
CDH8P55286 AC087685.1-201ENST00000587507 141 ntBASIC1.32□□□□□ -2.2
CDH8P55286 AL512605.2-201ENST00000592972 256 ntBASIC1.32□□□□□ -2.2
CDH8P55286 AC007742.2-201ENST00000618226 398 ntBASIC1.32□□□□□ -2.2
CDH8P55286 SNORA25.1-201ENST00000362326 128 ntBASIC1.31□□□□□ -2.2
CDH8P55286 RNU6-899P-201ENST00000363947 107 ntBASIC1.31□□□□□ -2.2
CDH8P55286 SNORD50B-201ENST00000364995 70 ntBASIC1.31□□□□□ -2.2
CDH8P55286 RNU6-514P-201ENST00000384208 107 ntBASIC1.31□□□□□ -2.2
CDH8P55286 AL731563.1-201ENST00000442202 214 ntBASIC1.31□□□□□ -2.2
CDH8P55286 RPL39P39-201ENST00000455840 151 ntBASIC1.31□□□□□ -2.2
CDH8P55286 AC090821.2-201ENST00000523552 176 ntBASIC1.31□□□□□ -2.2
CDH8P55286 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.31□□□□□ -2.2
CDH8P55286 AC005357.1-201ENST00000588399 301 ntBASIC1.31□□□□□ -2.2
CDH8P55286 Y_RNA.26-201ENST00000362539 101 ntBASIC1.3□□□□□ -2.2
CDH8P55286 Y_RNA.64-201ENST00000362845 102 ntBASIC1.3□□□□□ -2.2
CDH8P55286 RNU6-1209P-201ENST00000363655 107 ntBASIC1.3□□□□□ -2.2
CDH8P55286 Y_RNA.796-201ENST00000364268 102 ntBASIC1.3□□□□□ -2.2
CDH8P55286 Y_RNA.799-201ENST00000364992 102 ntBASIC1.3□□□□□ -2.2
CDH8P55286 RNU6-53P-201ENST00000365367 106 ntBASIC1.3□□□□□ -2.2
CDH8P55286 Y_RNA.422-201ENST00000384054 114 ntBASIC1.3□□□□□ -2.2
CDH8P55286 RNU6-763P-201ENST00000390865 106 ntBASIC1.3□□□□□ -2.2
CDH8P55286 MTCO2P33-201ENST00000402100 465 ntBASIC1.3□□□□□ -2.2
CDH8P55286 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.3□□□□□ -2.2
CDH8P55286 AC134026.1-201ENST00000623249 2239 ntBASIC1.3□□□□□ -2.2
CDH8P55286 SNORD14E-201ENST00000364009 85 ntBASIC1.29□□□□□ -2.2
CDH8P55286 SNORA25.8-201ENST00000364831 128 ntBASIC1.29□□□□□ -2.2
CDH8P55286 MIR15B-201ENST00000385045 98 ntBASIC1.29□□□□□ -2.2
CDH8P55286 MIR150-201ENST00000385048 84 ntBASIC1.29□□□□□ -2.2
CDH8P55286 MIR516B2-201ENST00000385190 85 ntBASIC1.29□□□□□ -2.2
CDH8P55286 MIR136-201ENST00000385207 82 ntBASIC1.29□□□□□ -2.2
CDH8P55286 RNU6-1054P-201ENST00000411293 104 ntBASIC1.29□□□□□ -2.2
CDH8P55286 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.29□□□□□ -2.2
CDH8P55286 AC090142.3-201ENST00000519012 385 ntBASIC1.29□□□□□ -2.2
CDH8P55286 AP003072.1-201ENST00000531740 145 ntBASIC1.29□□□□□ -2.2
CDH8P55286 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.29□□□□□ -2.2
CDH8P55286 MIR1276-201ENST00000408707 83 ntBASIC1.28□□□□□ -2.2
CDH8P55286 AC015922.2-201ENST00000435593 184 ntBASIC1.28□□□□□ -2.2
CDH8P55286 SNORA31.2-201ENST00000516019 134 ntBASIC1.28□□□□□ -2.2
CDH8P55286 SNORA31.4-201ENST00000516049 129 ntBASIC1.28□□□□□ -2.2
CDH8P55286 SNORD111.1-201ENST00000516421 86 ntBASIC1.28□□□□□ -2.2
CDH8P55286 AC008269.2-201ENST00000561915 1105 ntBASIC1.28□□□□□ -2.2
CDH8P55286 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
CDH8P55286 RNU6-1272P-201ENST00000362776 107 ntBASIC1.27□□□□□ -2.21
CDH8P55286 Y_RNA.84-201ENST00000363011 104 ntBASIC1.27□□□□□ -2.21
CDH8P55286 RNU6-1205P-201ENST00000363625 106 ntBASIC1.27□□□□□ -2.21
CDH8P55286 RNU6-144P-201ENST00000383951 107 ntBASIC1.27□□□□□ -2.21
CDH8P55286 AC245047.7-201ENST00000440265 293 ntBASIC1.27□□□□□ -2.21
CDH8P55286 NDUFA4P2-201ENST00000489989 244 ntBASIC1.27□□□□□ -2.21
CDH8P55286 AC091959.1-201ENST00000495857 238 ntBASIC1.27□□□□□ -2.21
CDH8P55286 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.27□□□□□ -2.21
CDH8P55286 RNA5SP102-201ENST00000516865 106 ntBASIC1.27□□□□□ -2.21
CDH8P55286 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CDH8P55286 RPL23AP91-201ENST00000569211 455 ntBASIC1.27□□□□□ -2.21
CDH8P55286 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.27□□□□□ -2.21
CDH8P55286 MIR6504-201ENST00000613520 61 ntBASIC1.27□□□□□ -2.21
CDH8P55286 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.27□□□□□ -2.21
CDH8P55286 SNORA25-201ENST00000384384 134 ntBASIC1.26□□□□□ -2.21
CDH8P55286 MIR222-201ENST00000384992 110 ntBASIC1.26□□□□□ -2.21
CDH8P55286 MIR802-201ENST00000390235 94 ntBASIC1.26□□□□□ -2.21
CDH8P55286 MIR1278-201ENST00000408753 81 ntBASIC1.26□□□□□ -2.21
CDH8P55286 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.26□□□□□ -2.21
CDH8P55286 Y_RNA.637-201ENST00000459424 114 ntBASIC1.26□□□□□ -2.21
CDH8P55286 AC048334.1-201ENST00000477975 159 ntBASIC1.26□□□□□ -2.21
CDH8P55286 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.26□□□□□ -2.21
CDH8P55286 RNU6-1007P-201ENST00000516586 107 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms