Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RNU4-90P-201ENST00000362773 141 ntBASIC1.18□□□□□ -2.22
HMGCS2P54868 RNU6-1048P-201ENST00000364054 107 ntBASIC1.18□□□□□ -2.22
HMGCS2P54868 Y_RNA.422-201ENST00000384054 114 ntBASIC1.18□□□□□ -2.22
HMGCS2P54868 SNORA72-201ENST00000384339 132 ntBASIC1.18□□□□□ -2.22
HMGCS2P54868 Y_RNA.569-201ENST00000384749 103 ntBASIC1.18□□□□□ -2.22
HMGCS2P54868 MIR606-201ENST00000384851 96 ntBASIC1.18□□□□□ -2.22
HMGCS2P54868 MIR513A1-201ENST00000385138 129 ntBASIC1.18□□□□□ -2.22
HMGCS2P54868 RNU6-1109P-201ENST00000391187 107 ntBASIC1.18□□□□□ -2.22
HMGCS2P54868 RNA5SP482-201ENST00000391269 118 ntBASIC1.18□□□□□ -2.22
HMGCS2P54868 MTCO1P5-201ENST00000433573 344 ntBASIC1.18□□□□□ -2.22
HMGCS2P54868 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.18□□□□□ -2.22
HMGCS2P54868 AC104332.1-201ENST00000440471 797 ntBASIC1.18□□□□□ -2.22
HMGCS2P54868 AL731563.1-201ENST00000442202 214 ntBASIC1.18□□□□□ -2.22
HMGCS2P54868 MTND5P22-201ENST00000458380 195 ntBASIC1.18□□□□□ -2.22
HMGCS2P54868 RNU7-28P-201ENST00000516759 62 ntBASIC1.18□□□□□ -2.22
HMGCS2P54868 AC136628.3-201ENST00000521868 290 ntBASIC1.18□□□□□ -2.22
HMGCS2P54868 AP003733.2-201ENST00000529409 171 ntBASIC1.18□□□□□ -2.22
HMGCS2P54868 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.18□□□□□ -2.22
HMGCS2P54868 AC008269.2-201ENST00000561915 1105 ntBASIC1.18□□□□□ -2.22
HMGCS2P54868 AC211469.2-201ENST00000605461 205 ntBASIC1.18□□□□□ -2.22
HMGCS2P54868 SNORA28-201ENST00000606769 126 ntBASIC1.18□□□□□ -2.22
HMGCS2P54868 AL591926.4-201ENST00000616895 298 ntBASIC1.18□□□□□ -2.22
HMGCS2P54868 AC068647.2-201ENST00000637380 353 ntBASIC1.18□□□□□ -2.22
HMGCS2P54868 Y_RNA.16-201ENST00000362421 102 ntBASIC1.17□□□□□ -2.22
HMGCS2P54868 Y_RNA.84-201ENST00000363011 104 ntBASIC1.17□□□□□ -2.22
HMGCS2P54868 SNORA63-201ENST00000363450 132 ntBASIC1.17□□□□□ -2.22
HMGCS2P54868 RNU4-38P-201ENST00000364472 129 ntBASIC1.17□□□□□ -2.22
HMGCS2P54868 SNORA25.8-201ENST00000364831 128 ntBASIC1.17□□□□□ -2.22
HMGCS2P54868 RNU6-290P-201ENST00000365212 101 ntBASIC1.17□□□□□ -2.22
HMGCS2P54868 Y_RNA.512-201ENST00000384518 102 ntBASIC1.17□□□□□ -2.22
HMGCS2P54868 MIR150-201ENST00000385048 84 ntBASIC1.17□□□□□ -2.22
HMGCS2P54868 SNORA26.5-201ENST00000391215 123 ntBASIC1.17□□□□□ -2.22
HMGCS2P54868 MIR548F4-201ENST00000408515 105 ntBASIC1.17□□□□□ -2.22
HMGCS2P54868 RPS27P16-201ENST00000425758 201 ntBASIC1.17□□□□□ -2.22
HMGCS2P54868 DYNLT3P2-201ENST00000442517 295 ntBASIC1.17□□□□□ -2.22
HMGCS2P54868 MTATP8P1-201ENST00000467115 207 ntBASIC1.17□□□□□ -2.22
HMGCS2P54868 RNA5SP436-201ENST00000516020 115 ntBASIC1.17□□□□□ -2.22
HMGCS2P54868 RNU7-115P-201ENST00000516433 55 ntBASIC1.17□□□□□ -2.22
HMGCS2P54868 RNU6-1116P-201ENST00000517269 99 ntBASIC1.17□□□□□ -2.22
HMGCS2P54868 AL442663.2-201ENST00000554385 511 ntBASIC1.17□□□□□ -2.22
HMGCS2P54868 MIR3973-201ENST00000579824 107 ntBASIC1.17□□□□□ -2.22
HMGCS2P54868 AP003357.1-201ENST00000604497 148 ntBASIC1.17□□□□□ -2.22
HMGCS2P54868 AL365434.2-201ENST00000607979 234 ntBASIC1.17□□□□□ -2.22
HMGCS2P54868 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.17□□□□□ -2.22
HMGCS2P54868 SNORD3E-202ENST00000627253 216 ntBASIC1.17□□□□□ -2.22
HMGCS2P54868 Y_RNA.152-201ENST00000363578 100 ntBASIC1.16□□□□□ -2.22
HMGCS2P54868 SNORA72.4-201ENST00000384174 132 ntBASIC1.16□□□□□ -2.22
HMGCS2P54868 RNU6-738P-201ENST00000384531 106 ntBASIC1.16□□□□□ -2.22
HMGCS2P54868 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.16□□□□□ -2.22
HMGCS2P54868 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.16□□□□□ -2.22
HMGCS2P54868 AC093850.1-201ENST00000454121 251 ntBASIC1.16□□□□□ -2.22
HMGCS2P54868 AC092991.1-201ENST00000477176 376 ntBASIC1.16□□□□□ -2.22
HMGCS2P54868 RPL30P7-201ENST00000479312 323 ntBASIC1.16□□□□□ -2.22
HMGCS2P54868 AC117454.1-201ENST00000491120 168 ntBASIC1.16□□□□□ -2.22
HMGCS2P54868 Y_RNA.720-201ENST00000517166 92 ntBASIC1.16□□□□□ -2.22
HMGCS2P54868 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.16□□□□□ -2.22
HMGCS2P54868 AC024405.2-202ENST00000532731 184 ntBASIC1.16□□□□□ -2.22
HMGCS2P54868 MIR4778-201ENST00000577635 80 ntBASIC1.16□□□□□ -2.22
HMGCS2P54868 MIR4762-201ENST00000585261 75 ntBASIC1.16□□□□□ -2.22
HMGCS2P54868 AC006504.6-201ENST00000590142 199 ntBASIC1.16□□□□□ -2.22
HMGCS2P54868 POLR3GP1-201ENST00000594073 261 ntBASIC1.16□□□□□ -2.22
HMGCS2P54868 AL078604.3-201ENST00000615580 211 ntBASIC1.16□□□□□ -2.22
HMGCS2P54868 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.16□□□□□ -2.22
HMGCS2P54868 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
HMGCS2P54868 AC068700.1-201ENST00000565862 3754 ntBASIC1.15□□□□□ -2.23
HMGCS2P54868 U8.5-201ENST00000364528 136 ntBASIC1.15□□□□□ -2.23
HMGCS2P54868 Y_RNA.253-201ENST00000364562 112 ntBASIC1.15□□□□□ -2.23
HMGCS2P54868 RNA5SP259-201ENST00000365541 109 ntBASIC1.15□□□□□ -2.23
HMGCS2P54868 MIR598-201ENST00000384868 97 ntBASIC1.15□□□□□ -2.23
HMGCS2P54868 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.15□□□□□ -2.23
HMGCS2P54868 Y_RNA.621-201ENST00000411065 96 ntBASIC1.15□□□□□ -2.23
HMGCS2P54868 AC024067.1-201ENST00000426199 223 ntBASIC1.15□□□□□ -2.23
HMGCS2P54868 RNU7-141P-201ENST00000459304 62 ntBASIC1.15□□□□□ -2.23
HMGCS2P54868 Y_RNA.637-201ENST00000459424 114 ntBASIC1.15□□□□□ -2.23
HMGCS2P54868 RNU6-1143P-201ENST00000516125 104 ntBASIC1.15□□□□□ -2.23
HMGCS2P54868 AC019288.1-201ENST00000557918 224 ntBASIC1.15□□□□□ -2.23
HMGCS2P54868 RNU6-939P-201ENST00000384634 107 ntBASIC1.14□□□□□ -2.23
HMGCS2P54868 MIR522-201ENST00000385071 87 ntBASIC1.14□□□□□ -2.23
HMGCS2P54868 RNU6-763P-201ENST00000390865 106 ntBASIC1.14□□□□□ -2.23
HMGCS2P54868 MIR1285-1-201ENST00000408593 84 ntBASIC1.14□□□□□ -2.23
HMGCS2P54868 RNU6-1203P-201ENST00000410703 110 ntBASIC1.14□□□□□ -2.23
HMGCS2P54868 RNU7-116P-201ENST00000516940 62 ntBASIC1.14□□□□□ -2.23
HMGCS2P54868 RNU2-31P-201ENST00000516954 155 ntBASIC1.14□□□□□ -2.23
HMGCS2P54868 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.14□□□□□ -2.23
HMGCS2P54868 AC127455.1-201ENST00000565496 145 ntBASIC1.14□□□□□ -2.23
HMGCS2P54868 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.14□□□□□ -2.23
HMGCS2P54868 MIR548AY-201ENST00000617669 107 ntBASIC1.14□□□□□ -2.23
HMGCS2P54868 AC106754.2-201ENST00000623006 233 ntBASIC1.14□□□□□ -2.23
HMGCS2P54868 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
HMGCS2P54868 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
HMGCS2P54868 SNORD68-201ENST00000363214 84 ntBASIC1.13□□□□□ -2.23
HMGCS2P54868 Y_RNA.145-201ENST00000363527 102 ntBASIC1.13□□□□□ -2.23
HMGCS2P54868 RNU6-326P-201ENST00000365480 107 ntBASIC1.13□□□□□ -2.23
HMGCS2P54868 MIR532-201ENST00000385025 91 ntBASIC1.13□□□□□ -2.23
HMGCS2P54868 MIR653-201ENST00000385279 96 ntBASIC1.13□□□□□ -2.23
HMGCS2P54868 U8.19-201ENST00000459095 133 ntBASIC1.13□□□□□ -2.23
HMGCS2P54868 RN7SKP179-201ENST00000516126 217 ntBASIC1.13□□□□□ -2.23
HMGCS2P54868 RNU6-917P-201ENST00000516294 104 ntBASIC1.13□□□□□ -2.23
HMGCS2P54868 SCARNA15.1-201ENST00000516384 125 ntBASIC1.13□□□□□ -2.23
HMGCS2P54868 AP001282.2-201ENST00000616149 309 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms