Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 RNY3P5-201ENST00000384127 102 ntBASIC2.01□□□□□ -2.09
COPB1P53618 MIR583-201ENST00000384846 75 ntBASIC2.01□□□□□ -2.09
COPB1P53618 MIR562-201ENST00000384894 95 ntBASIC2.01□□□□□ -2.09
COPB1P53618 AL606845.1-201ENST00000404881 255 ntBASIC2.01□□□□□ -2.09
COPB1P53618 SUMO1P3-201ENST00000439961 304 ntBASIC2.01□□□□□ -2.09
COPB1P53618 AC233266.1-201ENST00000454518 96 ntBASIC2.01□□□□□ -2.09
COPB1P53618 RNU6-561P-201ENST00000516222 102 ntBASIC2.01□□□□□ -2.09
COPB1P53618 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.01□□□□□ -2.09
COPB1P53618 AC109810.1-201ENST00000534066 224 ntBASIC2.01□□□□□ -2.09
COPB1P53618 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.01□□□□□ -2.09
COPB1P53618 SUB1P4-201ENST00000566062 339 ntBASIC2.01□□□□□ -2.09
COPB1P53618 MIR4419B-201ENST00000577260 68 ntBASIC2.01□□□□□ -2.09
COPB1P53618 MIR2681-201ENST00000581814 105 ntBASIC2.01□□□□□ -2.09
COPB1P53618 AC069114.2-201ENST00000604699 304 ntBASIC2.01□□□□□ -2.09
COPB1P53618 AL365434.2-201ENST00000607979 234 ntBASIC2.01□□□□□ -2.09
COPB1P53618 AC242852.1-201ENST00000612151 96 ntBASIC2.01□□□□□ -2.09
COPB1P53618 AC244015.1-201ENST00000622301 99 ntBASIC2.01□□□□□ -2.09
COPB1P53618 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
COPB1P53618 AC245060.5-201ENST00000610778 3293 ntBASIC2□□□□□ -2.09
COPB1P53618 SNORA63D-201ENST00000364359 132 ntBASIC2□□□□□ -2.09
COPB1P53618 Y_RNA.267-201ENST00000364679 109 ntBASIC2□□□□□ -2.09
COPB1P53618 RNA5SP109-201ENST00000391010 116 ntBASIC2□□□□□ -2.09
COPB1P53618 AL512604.1-201ENST00000404812 257 ntBASIC2□□□□□ -2.09
COPB1P53618 RNA5SP501-201ENST00000410990 112 ntBASIC2□□□□□ -2.09
COPB1P53618 RNA5SP450-201ENST00000411206 102 ntBASIC2□□□□□ -2.09
COPB1P53618 AL603825.1-201ENST00000438481 80 ntBASIC2□□□□□ -2.09
COPB1P53618 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2□□□□□ -2.09
COPB1P53618 RNU6-1007P-201ENST00000516586 107 ntBASIC2□□□□□ -2.09
COPB1P53618 AP002004.2-201ENST00000531656 154 ntBASIC2□□□□□ -2.09
COPB1P53618 RPL23AP91-201ENST00000569211 455 ntBASIC2□□□□□ -2.09
COPB1P53618 AL096840.1-201ENST00000603287 93 ntBASIC2□□□□□ -2.09
COPB1P53618 Y_RNA.253-201ENST00000364562 112 ntBASIC1.99□□□□□ -2.09
COPB1P53618 SNORD48-201ENST00000364953 64 ntBASIC1.99□□□□□ -2.09
COPB1P53618 SNORA26.9-201ENST00000391322 122 ntBASIC1.99□□□□□ -2.09
COPB1P53618 SEPT7P4-201ENST00000437076 306 ntBASIC1.99□□□□□ -2.09
COPB1P53618 MTND2P29-201ENST00000438595 412 ntBASIC1.99□□□□□ -2.09
COPB1P53618 SNRPGP8-201ENST00000454064 226 ntBASIC1.99□□□□□ -2.09
COPB1P53618 HMGN2P23-201ENST00000456759 269 ntBASIC1.99□□□□□ -2.09
COPB1P53618 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
COPB1P53618 Y_RNA.621-201ENST00000411065 96 ntBASIC1.98□□□□□ -2.09
COPB1P53618 AC003989.2-201ENST00000440224 169 ntBASIC1.98□□□□□ -2.09
COPB1P53618 AL049830.1-201ENST00000468034 425 ntBASIC1.98□□□□□ -2.09
COPB1P53618 NDUFA4P2-201ENST00000489989 244 ntBASIC1.98□□□□□ -2.09
COPB1P53618 HMGN1P7-201ENST00000491722 313 ntBASIC1.98□□□□□ -2.09
COPB1P53618 RPS29P11-201ENST00000496507 171 ntBASIC1.98□□□□□ -2.09
COPB1P53618 AC005840.1-201ENST00000498412 377 ntBASIC1.98□□□□□ -2.09
COPB1P53618 MIR3144-201ENST00000579460 79 ntBASIC1.98□□□□□ -2.09
COPB1P53618 MIR4431-201ENST00000579990 94 ntBASIC1.98□□□□□ -2.09
COPB1P53618 uc_338.4-201ENST00000616635 176 ntBASIC1.98□□□□□ -2.09
COPB1P53618 AC021753.1-201ENST00000635724 168 ntBASIC1.98□□□□□ -2.09
COPB1P53618 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
COPB1P53618 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
COPB1P53618 Y_RNA.140-201ENST00000363474 103 ntBASIC1.97□□□□□ -2.09
COPB1P53618 RNU4-84P-201ENST00000364200 139 ntBASIC1.97□□□□□ -2.09
COPB1P53618 Y_RNA.338-201ENST00000365320 114 ntBASIC1.97□□□□□ -2.09
COPB1P53618 RNU6-804P-201ENST00000384286 107 ntBASIC1.97□□□□□ -2.09
COPB1P53618 RNU6-296P-201ENST00000384608 107 ntBASIC1.97□□□□□ -2.09
COPB1P53618 Y_RNA.580-201ENST00000391004 95 ntBASIC1.97□□□□□ -2.09
COPB1P53618 Y_RNA.587-201ENST00000391210 103 ntBASIC1.97□□□□□ -2.09
COPB1P53618 AL603908.1-201ENST00000406098 201 ntBASIC1.97□□□□□ -2.09
COPB1P53618 RNU4-43P-201ENST00000410628 137 ntBASIC1.97□□□□□ -2.09
COPB1P53618 AC245047.3-201ENST00000429428 127 ntBASIC1.97□□□□□ -2.09
COPB1P53618 SNORA31.10-201ENST00000516482 106 ntBASIC1.97□□□□□ -2.09
COPB1P53618 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.97□□□□□ -2.09
COPB1P53618 AC078899.2-201ENST00000595282 212 ntBASIC1.97□□□□□ -2.09
COPB1P53618 AL049861.1-201ENST00000603130 150 ntBASIC1.97□□□□□ -2.09
COPB1P53618 AL591926.4-201ENST00000616895 298 ntBASIC1.97□□□□□ -2.09
COPB1P53618 MIR8054-201ENST00000620877 86 ntBASIC1.97□□□□□ -2.09
COPB1P53618 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
COPB1P53618 RNU6-112P-201ENST00000363599 104 ntBASIC1.96□□□□□ -2.1
COPB1P53618 Y_RNA.272-201ENST00000364696 102 ntBASIC1.96□□□□□ -2.1
COPB1P53618 SNORA12.1-201ENST00000390873 148 ntBASIC1.96□□□□□ -2.1
COPB1P53618 RNU2-55P-201ENST00000411146 174 ntBASIC1.96□□□□□ -2.1
COPB1P53618 AC055731.1-201ENST00000474387 401 ntBASIC1.96□□□□□ -2.1
COPB1P53618 SNORD77.4-201ENST00000516158 81 ntBASIC1.96□□□□□ -2.1
COPB1P53618 RNU7-121P-201ENST00000516604 62 ntBASIC1.96□□□□□ -2.1
COPB1P53618 RNU2-19P-201ENST00000517288 84 ntBASIC1.96□□□□□ -2.1
COPB1P53618 AC024614.2-201ENST00000577584 372 ntBASIC1.96□□□□□ -2.1
COPB1P53618 MIR4529-201ENST00000578110 78 ntBASIC1.96□□□□□ -2.1
COPB1P53618 AL627230.6-201ENST00000611129 280 ntBASIC1.96□□□□□ -2.1
COPB1P53618 AC104465.1-201ENST00000611365 139 ntBASIC1.96□□□□□ -2.1
COPB1P53618 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
COPB1P53618 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
COPB1P53618 Y_RNA.170-201ENST00000363746 110 ntBASIC1.95□□□□□ -2.1
COPB1P53618 SNORD45.3-201ENST00000363836 72 ntBASIC1.95□□□□□ -2.1
COPB1P53618 RNU6-728P-201ENST00000365375 104 ntBASIC1.95□□□□□ -2.1
COPB1P53618 RNU6-484P-201ENST00000384016 107 ntBASIC1.95□□□□□ -2.1
COPB1P53618 MIR15B-201ENST00000385045 98 ntBASIC1.95□□□□□ -2.1
COPB1P53618 MIR522-201ENST00000385071 87 ntBASIC1.95□□□□□ -2.1
COPB1P53618 RNU6-440P-201ENST00000390882 105 ntBASIC1.95□□□□□ -2.1
COPB1P53618 SNRPGP10-201ENST00000432323 225 ntBASIC1.95□□□□□ -2.1
COPB1P53618 AC069257.2-201ENST00000441819 155 ntBASIC1.95□□□□□ -2.1
COPB1P53618 AL121914.1-201ENST00000450188 156 ntBASIC1.95□□□□□ -2.1
COPB1P53618 MTND5P41-201ENST00000517498 206 ntBASIC1.95□□□□□ -2.1
COPB1P53618 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
COPB1P53618 MIR4762-201ENST00000585261 75 ntBASIC1.95□□□□□ -2.1
COPB1P53618 MIR126-201ENST00000362291 85 ntBASIC1.94□□□□□ -2.1
COPB1P53618 RNU6-1138P-201ENST00000365359 106 ntBASIC1.94□□□□□ -2.1
COPB1P53618 Y_RNA.398-201ENST00000383952 99 ntBASIC1.94□□□□□ -2.1
COPB1P53618 Y_RNA.506-201ENST00000384494 102 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms