Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 MIR376A1-201ENST00000616574 68 ntBASIC0.87□□□□□ -2.27
LHX2P50458 Y_RNA.105-201ENST00000363182 111 ntBASIC0.86□□□□□ -2.27
LHX2P50458 RNU4-80P-201ENST00000363200 141 ntBASIC0.86□□□□□ -2.27
LHX2P50458 Y_RNA.202-201ENST00000364083 110 ntBASIC0.86□□□□□ -2.27
LHX2P50458 AC117470.1-201ENST00000381974 330 ntBASIC0.86□□□□□ -2.27
LHX2P50458 Y_RNA.418-201ENST00000384029 102 ntBASIC0.86□□□□□ -2.27
LHX2P50458 Y_RNA.455-201ENST00000384230 98 ntBASIC0.86□□□□□ -2.27
LHX2P50458 MIR532-201ENST00000385025 91 ntBASIC0.86□□□□□ -2.27
LHX2P50458 RNU6-1248P-201ENST00000391096 64 ntBASIC0.86□□□□□ -2.27
LHX2P50458 MIR1298-201ENST00000408783 112 ntBASIC0.86□□□□□ -2.27
LHX2P50458 RNU6-121P-201ENST00000410525 99 ntBASIC0.86□□□□□ -2.27
LHX2P50458 Y_RNA.602-201ENST00000410535 92 ntBASIC0.86□□□□□ -2.27
LHX2P50458 RNU6-1054P-201ENST00000411293 104 ntBASIC0.86□□□□□ -2.27
LHX2P50458 ELOCP20-201ENST00000422460 345 ntBASIC0.86□□□□□ -2.27
LHX2P50458 AC104332.1-201ENST00000440471 797 ntBASIC0.86□□□□□ -2.27
LHX2P50458 HSPE1P25-201ENST00000455484 251 ntBASIC0.86□□□□□ -2.27
LHX2P50458 RNU6-191P-201ENST00000516295 94 ntBASIC0.86□□□□□ -2.27
LHX2P50458 SNORD45.4-201ENST00000516629 73 ntBASIC0.86□□□□□ -2.27
LHX2P50458 FAM106DP-201ENST00000586416 501 ntBASIC0.86□□□□□ -2.27
LHX2P50458 RNU6-1084P-201ENST00000362498 107 ntBASIC0.85□□□□□ -2.27
LHX2P50458 RNU4-90P-201ENST00000362773 141 ntBASIC0.85□□□□□ -2.27
LHX2P50458 Y_RNA.136-201ENST00000363444 102 ntBASIC0.85□□□□□ -2.27
LHX2P50458 RNU6-770P-201ENST00000363929 105 ntBASIC0.85□□□□□ -2.27
LHX2P50458 Y_RNA.203-201ENST00000364106 102 ntBASIC0.85□□□□□ -2.27
LHX2P50458 SNORD50B-201ENST00000364995 70 ntBASIC0.85□□□□□ -2.27
LHX2P50458 RNU6-102P-201ENST00000384485 104 ntBASIC0.85□□□□□ -2.27
LHX2P50458 Y_RNA.527-201ENST00000384573 102 ntBASIC0.85□□□□□ -2.27
LHX2P50458 Y_RNA.569-201ENST00000384749 103 ntBASIC0.85□□□□□ -2.27
LHX2P50458 RNU2-14P-201ENST00000411053 191 ntBASIC0.85□□□□□ -2.27
LHX2P50458 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.85□□□□□ -2.27
LHX2P50458 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.85□□□□□ -2.27
LHX2P50458 SNRPGP10-201ENST00000432323 225 ntBASIC0.85□□□□□ -2.27
LHX2P50458 AC098869.1-201ENST00000481627 292 ntBASIC0.85□□□□□ -2.27
LHX2P50458 RPL23AP54-201ENST00000495129 419 ntBASIC0.85□□□□□ -2.27
LHX2P50458 RNU7-40P-201ENST00000516397 64 ntBASIC0.85□□□□□ -2.27
LHX2P50458 RNU6-1137P-201ENST00000517073 99 ntBASIC0.85□□□□□ -2.27
LHX2P50458 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.85□□□□□ -2.27
LHX2P50458 AC127455.1-201ENST00000565496 145 ntBASIC0.85□□□□□ -2.27
LHX2P50458 AL355297.3-201ENST00000604082 446 ntBASIC0.85□□□□□ -2.27
LHX2P50458 MIR548AY-201ENST00000617669 107 ntBASIC0.85□□□□□ -2.27
LHX2P50458 Y_RNA.11-201ENST00000362375 109 ntBASIC0.84□□□□□ -2.27
LHX2P50458 RNU6-1048P-201ENST00000364054 107 ntBASIC0.84□□□□□ -2.27
LHX2P50458 Y_RNA.224-201ENST00000364308 111 ntBASIC0.84□□□□□ -2.27
LHX2P50458 MIR518E-201ENST00000385252 88 ntBASIC0.84□□□□□ -2.27
LHX2P50458 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
LHX2P50458 RNU6-131P-201ENST00000391144 107 ntBASIC0.84□□□□□ -2.27
LHX2P50458 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.84□□□□□ -2.27
LHX2P50458 LINC01399-202ENST00000458450 244 ntBASIC0.84□□□□□ -2.27
LHX2P50458 RNU7-141P-201ENST00000459304 62 ntBASIC0.84□□□□□ -2.27
LHX2P50458 RNU6-947P-201ENST00000516264 106 ntBASIC0.84□□□□□ -2.27
LHX2P50458 RNU6-764P-201ENST00000516396 105 ntBASIC0.84□□□□□ -2.27
LHX2P50458 Y_RNA.714-201ENST00000517065 90 ntBASIC0.84□□□□□ -2.27
LHX2P50458 AC113195.1-201ENST00000579952 141 ntBASIC0.84□□□□□ -2.27
LHX2P50458 MIR4680-201ENST00000580906 66 ntBASIC0.84□□□□□ -2.27
LHX2P50458 AL356055.1-201ENST00000602528 446 ntBASIC0.84□□□□□ -2.27
LHX2P50458 AL357312.1-201ENST00000603879 298 ntBASIC0.84□□□□□ -2.27
LHX2P50458 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.84□□□□□ -2.27
LHX2P50458 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
LHX2P50458 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
LHX2P50458 MIR373-201ENST00000362273 69 ntBASIC0.83□□□□□ -2.28
LHX2P50458 Y_RNA.19-201ENST00000362462 99 ntBASIC0.83□□□□□ -2.28
LHX2P50458 snoU2_19.2-201ENST00000363024 80 ntBASIC0.83□□□□□ -2.28
LHX2P50458 RNU6-674P-201ENST00000363831 107 ntBASIC0.83□□□□□ -2.28
LHX2P50458 Y_RNA.210-201ENST00000364161 110 ntBASIC0.83□□□□□ -2.28
LHX2P50458 Y_RNA.796-201ENST00000364268 102 ntBASIC0.83□□□□□ -2.28
LHX2P50458 Y_RNA.276-201ENST00000364732 109 ntBASIC0.83□□□□□ -2.28
LHX2P50458 Y_RNA.799-201ENST00000364992 102 ntBASIC0.83□□□□□ -2.28
LHX2P50458 snoU2-30.1-201ENST00000365012 70 ntBASIC0.83□□□□□ -2.28
LHX2P50458 Y_RNA.336-201ENST00000365307 109 ntBASIC0.83□□□□□ -2.28
LHX2P50458 RNU6-969P-201ENST00000383900 105 ntBASIC0.83□□□□□ -2.28
LHX2P50458 RNU6-1227P-201ENST00000383981 107 ntBASIC0.83□□□□□ -2.28
LHX2P50458 SNORA72.4-201ENST00000384174 132 ntBASIC0.83□□□□□ -2.28
LHX2P50458 MIR520E-201ENST00000384867 87 ntBASIC0.83□□□□□ -2.28
LHX2P50458 MIR452-201ENST00000385020 85 ntBASIC0.83□□□□□ -2.28
LHX2P50458 Y_RNA.581-201ENST00000391017 97 ntBASIC0.83□□□□□ -2.28
LHX2P50458 SNORA26.5-201ENST00000391215 123 ntBASIC0.83□□□□□ -2.28
LHX2P50458 SNORA36B-201ENST00000410438 131 ntBASIC0.83□□□□□ -2.28
LHX2P50458 AC005534.2-201ENST00000431047 433 ntBASIC0.83□□□□□ -2.28
LHX2P50458 RNY3P15-201ENST00000516297 97 ntBASIC0.83□□□□□ -2.28
LHX2P50458 SNORA40.15-201ENST00000516884 107 ntBASIC0.83□□□□□ -2.28
LHX2P50458 RNA5SP404-201ENST00000517118 132 ntBASIC0.83□□□□□ -2.28
LHX2P50458 AC131281.1-201ENST00000522984 164 ntBASIC0.83□□□□□ -2.28
LHX2P50458 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.83□□□□□ -2.28
LHX2P50458 MIR6857-201ENST00000613267 93 ntBASIC0.83□□□□□ -2.28
LHX2P50458 AC012676.2-201ENST00000619258 186 ntBASIC0.83□□□□□ -2.28
LHX2P50458 AL442644.1-201ENST00000454390 3105 ntBASIC0.82□□□□□ -2.28
LHX2P50458 RNU6-1209P-201ENST00000363655 107 ntBASIC0.82□□□□□ -2.28
LHX2P50458 Y_RNA.269-201ENST00000364685 89 ntBASIC0.82□□□□□ -2.28
LHX2P50458 RNU6-806P-201ENST00000365147 105 ntBASIC0.82□□□□□ -2.28
LHX2P50458 SNORA33.2-201ENST00000365413 134 ntBASIC0.82□□□□□ -2.28
LHX2P50458 SNORA25-201ENST00000384384 134 ntBASIC0.82□□□□□ -2.28
LHX2P50458 MIR215-201ENST00000384858 110 ntBASIC0.82□□□□□ -2.28
LHX2P50458 RNU6-985P-201ENST00000410182 104 ntBASIC0.82□□□□□ -2.28
LHX2P50458 MTCO1P5-201ENST00000433573 344 ntBASIC0.82□□□□□ -2.28
LHX2P50458 AC048334.1-201ENST00000477975 159 ntBASIC0.82□□□□□ -2.28
LHX2P50458 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.82□□□□□ -2.28
LHX2P50458 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.82□□□□□ -2.28
LHX2P50458 RNU6-1143P-201ENST00000516125 104 ntBASIC0.82□□□□□ -2.28
LHX2P50458 AC090142.3-201ENST00000519012 385 ntBASIC0.82□□□□□ -2.28
LHX2P50458 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms