Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AL049861.1-201ENST00000603130 150 ntBASIC2.57□□□□□ -2
MRE11P49959 AL365222.1-201ENST00000614661 98 ntBASIC2.57□□□□□ -2
MRE11P49959 MIR6844-201ENST00000637122 62 ntBASIC2.57□□□□□ -2
MRE11P49959 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
MRE11P49959 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.56□□□□□ -2
MRE11P49959 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
MRE11P49959 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.56□□□□□ -2
MRE11P49959 SNORA25B-201ENST00000365507 128 ntBASIC2.56□□□□□ -2
MRE11P49959 SNORA22C-201ENST00000384614 134 ntBASIC2.56□□□□□ -2
MRE11P49959 RNU6-1168P-201ENST00000390831 104 ntBASIC2.56□□□□□ -2
MRE11P49959 AC011406.1-201ENST00000512440 370 ntBASIC2.56□□□□□ -2
MRE11P49959 RNU6-313P-201ENST00000516317 112 ntBASIC2.56□□□□□ -2
MRE11P49959 AC011604.1-201ENST00000545978 196 ntBASIC2.56□□□□□ -2
MRE11P49959 MIR6873-201ENST00000622788 63 ntBASIC2.56□□□□□ -2
MRE11P49959 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.56□□□□□ -2
MRE11P49959 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
MRE11P49959 snoU2-30.2-201ENST00000362805 70 ntBASIC2.55□□□□□ -2
MRE11P49959 RNU1-96P-201ENST00000364163 162 ntBASIC2.55□□□□□ -2
MRE11P49959 RNU6-484P-201ENST00000384016 107 ntBASIC2.55□□□□□ -2
MRE11P49959 Y_RNA.542-201ENST00000384641 111 ntBASIC2.55□□□□□ -2
MRE11P49959 AL359511.1-201ENST00000402970 211 ntBASIC2.55□□□□□ -2
MRE11P49959 SNORA79-201ENST00000408376 140 ntBASIC2.55□□□□□ -2
MRE11P49959 RNU2-55P-201ENST00000411146 174 ntBASIC2.55□□□□□ -2
MRE11P49959 MTATP6P29-201ENST00000415057 132 ntBASIC2.55□□□□□ -2
MRE11P49959 AC092991.1-201ENST00000477176 376 ntBASIC2.55□□□□□ -2
MRE11P49959 RNU6-1146P-201ENST00000516282 102 ntBASIC2.55□□□□□ -2
MRE11P49959 RNU6-197P-201ENST00000516680 100 ntBASIC2.55□□□□□ -2
MRE11P49959 RNU6-971P-201ENST00000516920 106 ntBASIC2.55□□□□□ -2
MRE11P49959 RPL23AP91-201ENST00000569211 455 ntBASIC2.55□□□□□ -2
MRE11P49959 MIR378D2-201ENST00000580636 98 ntBASIC2.55□□□□□ -2
MRE11P49959 MIR2681-201ENST00000581814 105 ntBASIC2.55□□□□□ -2
MRE11P49959 SNORD114-26-201ENST00000363543 72 ntBASIC2.54□□□□□ -2
MRE11P49959 RNU6-597P-201ENST00000365620 102 ntBASIC2.54□□□□□ -2
MRE11P49959 Y_RNA.432-201ENST00000384087 111 ntBASIC2.54□□□□□ -2
MRE11P49959 RNU6-588P-201ENST00000410281 105 ntBASIC2.54□□□□□ -2
MRE11P49959 SRIP3-201ENST00000413200 219 ntBASIC2.54□□□□□ -2
MRE11P49959 SNORD11-201ENST00000459124 84 ntBASIC2.54□□□□□ -2
MRE11P49959 RNA5SP364-201ENST00000516938 78 ntBASIC2.54□□□□□ -2
MRE11P49959 RNU6-1096P-201ENST00000517089 102 ntBASIC2.54□□□□□ -2
MRE11P49959 CYCSP26-201ENST00000534107 320 ntBASIC2.54□□□□□ -2
MRE11P49959 MIR3935-201ENST00000583472 104 ntBASIC2.54□□□□□ -2
MRE11P49959 AC120024.3-201ENST00000603167 156 ntBASIC2.54□□□□□ -2
MRE11P49959 AC073413.2-201ENST00000604332 360 ntBASIC2.54□□□□□ -2
MRE11P49959 AL359821.1-201ENST00000605519 182 ntBASIC2.54□□□□□ -2
MRE11P49959 uc_338.20-201ENST00000621563 178 ntBASIC2.54□□□□□ -2
MRE11P49959 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
MRE11P49959 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.54□□□□□ -2
MRE11P49959 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
MRE11P49959 RNU6-1209P-201ENST00000363655 107 ntBASIC2.53□□□□□ -2
MRE11P49959 RNY1P11-201ENST00000363759 113 ntBASIC2.53□□□□□ -2
MRE11P49959 RNA5SP160-201ENST00000364866 120 ntBASIC2.53□□□□□ -2
MRE11P49959 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.53□□□□□ -2
MRE11P49959 RNU6-460P-201ENST00000391158 108 ntBASIC2.53□□□□□ -2
MRE11P49959 SNORA75.5-201ENST00000391291 81 ntBASIC2.53□□□□□ -2
MRE11P49959 RNU6-1186P-201ENST00000410429 97 ntBASIC2.53□□□□□ -2
MRE11P49959 AL353689.1-201ENST00000438895 199 ntBASIC2.53□□□□□ -2
MRE11P49959 AC234781.5-201ENST00000508429 271 ntBASIC2.53□□□□□ -2
MRE11P49959 SNORD77.4-201ENST00000516158 81 ntBASIC2.53□□□□□ -2
MRE11P49959 RNU6-1299P-201ENST00000516316 100 ntBASIC2.53□□□□□ -2
MRE11P49959 RNA5SP281-201ENST00000516504 135 ntBASIC2.53□□□□□ -2
MRE11P49959 RNU7-128P-201ENST00000517247 62 ntBASIC2.53□□□□□ -2
MRE11P49959 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.53□□□□□ -2
MRE11P49959 AL160236.1-201ENST00000556317 195 ntBASIC2.53□□□□□ -2
MRE11P49959 uc_338.4-201ENST00000616635 176 ntBASIC2.53□□□□□ -2
MRE11P49959 RNU6-1290P-201ENST00000362957 109 ntBASIC2.52□□□□□ -2.01
MRE11P49959 Y_RNA.99-201ENST00000363138 105 ntBASIC2.52□□□□□ -2.01
MRE11P49959 Y_RNA.218-201ENST00000364218 104 ntBASIC2.52□□□□□ -2.01
MRE11P49959 Y_RNA.251-201ENST00000364551 99 ntBASIC2.52□□□□□ -2.01
MRE11P49959 RNU6-1082P-201ENST00000364574 107 ntBASIC2.52□□□□□ -2.01
MRE11P49959 MIR562-201ENST00000384894 95 ntBASIC2.52□□□□□ -2.01
MRE11P49959 MIR520G-201ENST00000385064 90 ntBASIC2.52□□□□□ -2.01
MRE11P49959 AC008267.6-201ENST00000441664 139 ntBASIC2.52□□□□□ -2.01
MRE11P49959 RNU6-1041P-201ENST00000516254 102 ntBASIC2.52□□□□□ -2.01
MRE11P49959 RNU7-99P-201ENST00000516271 62 ntBASIC2.52□□□□□ -2.01
MRE11P49959 MIR5007-201ENST00000583098 95 ntBASIC2.52□□□□□ -2.01
MRE11P49959 AC007229.1-201ENST00000590455 412 ntBASIC2.52□□□□□ -2.01
MRE11P49959 MIR338-201ENST00000636369 67 ntBASIC2.52□□□□□ -2.01
MRE11P49959 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.51□□□□□ -2.01
MRE11P49959 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.51□□□□□ -2.01
MRE11P49959 RNU6-978P-201ENST00000364371 103 ntBASIC2.51□□□□□ -2.01
MRE11P49959 SNORD114-6-201ENST00000364393 72 ntBASIC2.51□□□□□ -2.01
MRE11P49959 RNU6-1080P-201ENST00000383982 107 ntBASIC2.51□□□□□ -2.01
MRE11P49959 RNA5SP467-201ENST00000391274 118 ntBASIC2.51□□□□□ -2.01
MRE11P49959 RNU6-735P-201ENST00000410612 107 ntBASIC2.51□□□□□ -2.01
MRE11P49959 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
MRE11P49959 CYCSP49-201ENST00000420810 319 ntBASIC2.51□□□□□ -2.01
MRE11P49959 AC018634.1-201ENST00000437554 401 ntBASIC2.51□□□□□ -2.01
MRE11P49959 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.51□□□□□ -2.01
MRE11P49959 SNORD14A-201ENST00000606526 91 ntBASIC2.51□□□□□ -2.01
MRE11P49959 AC103810.6-201ENST00000606708 136 ntBASIC2.51□□□□□ -2.01
MRE11P49959 AL353149.1-201ENST00000610667 244 ntBASIC2.51□□□□□ -2.01
MRE11P49959 TUG1_4.1-201ENST00000619464 181 ntBASIC2.51□□□□□ -2.01
MRE11P49959 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.51□□□□□ -2.01
MRE11P49959 Y_RNA.71-201ENST00000362892 104 ntBASIC2.5□□□□□ -2.01
MRE11P49959 Y_RNA.178-201ENST00000363832 102 ntBASIC2.5□□□□□ -2.01
MRE11P49959 MIR539-201ENST00000365690 78 ntBASIC2.5□□□□□ -2.01
MRE11P49959 U8.13-201ENST00000390842 128 ntBASIC2.5□□□□□ -2.01
MRE11P49959 MIR1262-201ENST00000408276 93 ntBASIC2.5□□□□□ -2.01
MRE11P49959 RNA5SP270-201ENST00000411361 118 ntBASIC2.5□□□□□ -2.01
MRE11P49959 AC023449.1-201ENST00000454464 154 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms