Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 AC234781.5-201ENST00000508429 271 ntBASIC1.9□□□□□ -2.11
THBS3P49746 Y_RNA.690-201ENST00000516603 95 ntBASIC1.9□□□□□ -2.11
THBS3P49746 AC103810.6-201ENST00000606708 136 ntBASIC1.9□□□□□ -2.11
THBS3P49746 AC242852.1-201ENST00000612151 96 ntBASIC1.9□□□□□ -2.11
THBS3P49746 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.9□□□□□ -2.11
THBS3P49746 AC244015.1-201ENST00000622301 99 ntBASIC1.9□□□□□ -2.11
THBS3P49746 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
THBS3P49746 ZNF720P1-201ENST00000562403 1939 ntBASIC1.89□□□□□ -2.11
THBS3P49746 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
THBS3P49746 RNA5SP289-201ENST00000362332 137 ntBASIC1.89□□□□□ -2.11
THBS3P49746 Y_RNA.52-201ENST00000362760 96 ntBASIC1.89□□□□□ -2.11
THBS3P49746 SNORD114-6-201ENST00000364393 72 ntBASIC1.89□□□□□ -2.11
THBS3P49746 Y_RNA.253-201ENST00000364562 112 ntBASIC1.89□□□□□ -2.11
THBS3P49746 RNU6-309P-201ENST00000364573 106 ntBASIC1.89□□□□□ -2.11
THBS3P49746 RNA5SP125-201ENST00000364843 120 ntBASIC1.89□□□□□ -2.11
THBS3P49746 SNORA12.1-201ENST00000390873 148 ntBASIC1.89□□□□□ -2.11
THBS3P49746 SNORA26-201ENST00000391286 122 ntBASIC1.89□□□□□ -2.11
THBS3P49746 RNU2-40P-201ENST00000410833 196 ntBASIC1.89□□□□□ -2.11
THBS3P49746 AC003685.2-201ENST00000422795 395 ntBASIC1.89□□□□□ -2.11
THBS3P49746 RPS15AP28-201ENST00000435088 386 ntBASIC1.89□□□□□ -2.11
THBS3P49746 PDCD5P2-201ENST00000507570 312 ntBASIC1.89□□□□□ -2.11
THBS3P49746 MRPS17P9-201ENST00000511924 393 ntBASIC1.89□□□□□ -2.11
THBS3P49746 RNU5E-3P-201ENST00000515913 68 ntBASIC1.89□□□□□ -2.11
THBS3P49746 SNORD33.1-201ENST00000516213 88 ntBASIC1.89□□□□□ -2.11
THBS3P49746 RNU7-99P-201ENST00000516271 62 ntBASIC1.89□□□□□ -2.11
THBS3P49746 RNU6-1146P-201ENST00000516282 102 ntBASIC1.89□□□□□ -2.11
THBS3P49746 AC133485.4-201ENST00000561835 220 ntBASIC1.89□□□□□ -2.11
THBS3P49746 AC138907.4-201ENST00000570107 226 ntBASIC1.89□□□□□ -2.11
THBS3P49746 AC007229.1-201ENST00000590455 412 ntBASIC1.89□□□□□ -2.11
THBS3P49746 AC108081.1-201ENST00000604358 221 ntBASIC1.89□□□□□ -2.11
THBS3P49746 MIR6840-201ENST00000611937 71 ntBASIC1.89□□□□□ -2.11
THBS3P49746 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.89□□□□□ -2.11
THBS3P49746 MIR338-201ENST00000636369 67 ntBASIC1.89□□□□□ -2.11
THBS3P49746 U6.108-201ENST00000637764 58 ntBASIC1.89□□□□□ -2.11
THBS3P49746 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.89□□□□□ -2.11
THBS3P49746 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
THBS3P49746 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.88□□□□□ -2.11
THBS3P49746 Y_RNA.267-201ENST00000364679 109 ntBASIC1.88□□□□□ -2.11
THBS3P49746 SNORA1-201ENST00000384107 130 ntBASIC1.88□□□□□ -2.11
THBS3P49746 MIR561-201ENST00000385216 97 ntBASIC1.88□□□□□ -2.11
THBS3P49746 SNORD72-201ENST00000390994 80 ntBASIC1.88□□□□□ -2.11
THBS3P49746 AL603914.1-201ENST00000401964 204 ntBASIC1.88□□□□□ -2.11
THBS3P49746 SNORA3.2-201ENST00000408221 125 ntBASIC1.88□□□□□ -2.11
THBS3P49746 RNA5SP127-201ENST00000411051 133 ntBASIC1.88□□□□□ -2.11
THBS3P49746 EDDM3CP-201ENST00000415977 425 ntBASIC1.88□□□□□ -2.11
THBS3P49746 SNRPGP10-201ENST00000432323 225 ntBASIC1.88□□□□□ -2.11
THBS3P49746 HMGN1P7-201ENST00000491722 313 ntBASIC1.88□□□□□ -2.11
THBS3P49746 SNORA18.4-201ENST00000516440 124 ntBASIC1.88□□□□□ -2.11
THBS3P49746 RNU6-1061P-201ENST00000516530 99 ntBASIC1.88□□□□□ -2.11
THBS3P49746 RNU6-365P-201ENST00000517113 106 ntBASIC1.88□□□□□ -2.11
THBS3P49746 MIR4662B-201ENST00000579498 81 ntBASIC1.88□□□□□ -2.11
THBS3P49746 MIR3129-201ENST00000581095 76 ntBASIC1.88□□□□□ -2.11
THBS3P49746 MIR5007-201ENST00000583098 95 ntBASIC1.88□□□□□ -2.11
THBS3P49746 AC104984.5-201ENST00000586878 94 ntBASIC1.88□□□□□ -2.11
THBS3P49746 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.88□□□□□ -2.11
THBS3P49746 AC245884.12-201ENST00000615364 59 ntBASIC1.88□□□□□ -2.11
THBS3P49746 MIR6766-201ENST00000622641 72 ntBASIC1.88□□□□□ -2.11
THBS3P49746 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
THBS3P49746 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
THBS3P49746 MTND5P32-201ENST00000560711 1802 ntBASIC1.87□□□□□ -2.11
THBS3P49746 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
THBS3P49746 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
THBS3P49746 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
THBS3P49746 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
THBS3P49746 U8.2-201ENST00000363156 134 ntBASIC1.87□□□□□ -2.11
THBS3P49746 RNU1-52P-201ENST00000384190 164 ntBASIC1.87□□□□□ -2.11
THBS3P49746 MIR624-201ENST00000385217 97 ntBASIC1.87□□□□□ -2.11
THBS3P49746 MIR1261-201ENST00000408659 82 ntBASIC1.87□□□□□ -2.11
THBS3P49746 RNA5SP425-201ENST00000410336 112 ntBASIC1.87□□□□□ -2.11
THBS3P49746 RN7SKP192-201ENST00000411291 327 ntBASIC1.87□□□□□ -2.11
THBS3P49746 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.87□□□□□ -2.11
THBS3P49746 AL353689.1-201ENST00000438895 199 ntBASIC1.87□□□□□ -2.11
THBS3P49746 AC090255.1-201ENST00000495779 349 ntBASIC1.87□□□□□ -2.11
THBS3P49746 RNU1-41P-201ENST00000516161 162 ntBASIC1.87□□□□□ -2.11
THBS3P49746 RNU6-781P-201ENST00000516377 101 ntBASIC1.87□□□□□ -2.11
THBS3P49746 RNU1-48P-201ENST00000516400 162 ntBASIC1.87□□□□□ -2.11
THBS3P49746 RNU6-589P-201ENST00000516485 107 ntBASIC1.87□□□□□ -2.11
THBS3P49746 Y_RNA.709-201ENST00000516952 92 ntBASIC1.87□□□□□ -2.11
THBS3P49746 AL365205.2-201ENST00000594586 68 ntBASIC1.87□□□□□ -2.11
THBS3P49746 MIR6079-201ENST00000635807 62 ntBASIC1.87□□□□□ -2.11
THBS3P49746 SNORD58C-201ENST00000365223 64 ntBASIC1.86□□□□□ -2.11
THBS3P49746 SNORA25B-201ENST00000365507 128 ntBASIC1.86□□□□□ -2.11
THBS3P49746 SNORD18B-201ENST00000365659 72 ntBASIC1.86□□□□□ -2.11
THBS3P49746 MIR524-201ENST00000385242 87 ntBASIC1.86□□□□□ -2.11
THBS3P49746 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
THBS3P49746 MIR891A-201ENST00000401237 79 ntBASIC1.86□□□□□ -2.11
THBS3P49746 AL117342.1-201ENST00000404861 406 ntBASIC1.86□□□□□ -2.11
THBS3P49746 MIR1262-201ENST00000408276 93 ntBASIC1.86□□□□□ -2.11
THBS3P49746 Z98742.3-201ENST00000418637 326 ntBASIC1.86□□□□□ -2.11
THBS3P49746 Y_RNA.651-201ENST00000459380 103 ntBASIC1.86□□□□□ -2.11
THBS3P49746 RPS26P45-201ENST00000471748 340 ntBASIC1.86□□□□□ -2.11
THBS3P49746 YWHAEP4-201ENST00000505390 198 ntBASIC1.86□□□□□ -2.11
THBS3P49746 RNU6-1270P-201ENST00000517128 108 ntBASIC1.86□□□□□ -2.11
THBS3P49746 AC008507.4-201ENST00000585464 127 ntBASIC1.86□□□□□ -2.11
THBS3P49746 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
THBS3P49746 AL359075.3-201ENST00000613288 217 ntBASIC1.86□□□□□ -2.11
THBS3P49746 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.86□□□□□ -2.11
THBS3P49746 U6.95-201ENST00000636931 70 ntBASIC1.86□□□□□ -2.11
THBS3P49746 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
THBS3P49746 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 240 ms