Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
SOX2P48431 RNU6-1084P-201ENST00000362498 107 ntBASIC1.8□□□□□ -2.12
SOX2P48431 SNORD45.3-201ENST00000363836 72 ntBASIC1.8□□□□□ -2.12
SOX2P48431 RNU6-1138P-201ENST00000365359 106 ntBASIC1.8□□□□□ -2.12
SOX2P48431 Y_RNA.432-201ENST00000384087 111 ntBASIC1.8□□□□□ -2.12
SOX2P48431 Y_RNA.441-201ENST00000384123 112 ntBASIC1.8□□□□□ -2.12
SOX2P48431 RNU6-1031P-201ENST00000384773 107 ntBASIC1.8□□□□□ -2.12
SOX2P48431 RNA5SP212-201ENST00000391223 107 ntBASIC1.8□□□□□ -2.12
SOX2P48431 SNRPGP8-201ENST00000454064 226 ntBASIC1.8□□□□□ -2.12
SOX2P48431 RNU6-561P-201ENST00000516222 102 ntBASIC1.8□□□□□ -2.12
SOX2P48431 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.8□□□□□ -2.12
SOX2P48431 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.8□□□□□ -2.12
SOX2P48431 MIR3162-201ENST00000581818 82 ntBASIC1.8□□□□□ -2.12
SOX2P48431 AC104984.5-201ENST00000586878 94 ntBASIC1.8□□□□□ -2.12
SOX2P48431 AL627230.6-201ENST00000611129 280 ntBASIC1.8□□□□□ -2.12
SOX2P48431 Pinc.1-201ENST00000616452 154 ntBASIC1.8□□□□□ -2.12
SOX2P48431 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.8□□□□□ -2.12
SOX2P48431 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SOX2P48431 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.79□□□□□ -2.12
SOX2P48431 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.79□□□□□ -2.12
SOX2P48431 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
SOX2P48431 RNU6-1062P-201ENST00000383908 107 ntBASIC1.79□□□□□ -2.12
SOX2P48431 MIR802-201ENST00000390235 94 ntBASIC1.79□□□□□ -2.12
SOX2P48431 SNORA26-201ENST00000391286 122 ntBASIC1.79□□□□□ -2.12
SOX2P48431 RNU4-43P-201ENST00000410628 137 ntBASIC1.79□□□□□ -2.12
SOX2P48431 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.79□□□□□ -2.12
SOX2P48431 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.79□□□□□ -2.12
SOX2P48431 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.79□□□□□ -2.12
SOX2P48431 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.79□□□□□ -2.12
SOX2P48431 AC008507.4-201ENST00000585464 127 ntBASIC1.79□□□□□ -2.12
SOX2P48431 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.79□□□□□ -2.12
SOX2P48431 AL096840.1-201ENST00000603287 93 ntBASIC1.79□□□□□ -2.12
SOX2P48431 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.79□□□□□ -2.12
SOX2P48431 snoU2-30.1-201ENST00000365012 70 ntBASIC1.78□□□□□ -2.12
SOX2P48431 RNU6-643P-201ENST00000384018 107 ntBASIC1.78□□□□□ -2.12
SOX2P48431 RNU6-360P-201ENST00000390944 104 ntBASIC1.78□□□□□ -2.12
SOX2P48431 RNU2-70P-201ENST00000410718 179 ntBASIC1.78□□□□□ -2.12
SOX2P48431 RNU5E-9P-201ENST00000411164 104 ntBASIC1.78□□□□□ -2.12
SOX2P48431 RPL30P13-201ENST00000418873 348 ntBASIC1.78□□□□□ -2.12
SOX2P48431 MRPS17P9-201ENST00000511924 393 ntBASIC1.78□□□□□ -2.12
SOX2P48431 AC107027.2-201ENST00000512197 115 ntBASIC1.78□□□□□ -2.12
SOX2P48431 AL773524.1-201ENST00000614065 229 ntBASIC1.78□□□□□ -2.12
SOX2P48431 MIR6873-201ENST00000622788 63 ntBASIC1.78□□□□□ -2.12
SOX2P48431 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
SOX2P48431 SNORD14E-201ENST00000364009 85 ntBASIC1.77□□□□□ -2.13
SOX2P48431 RNU4-84P-201ENST00000364200 139 ntBASIC1.77□□□□□ -2.13
SOX2P48431 RNU6-484P-201ENST00000384016 107 ntBASIC1.77□□□□□ -2.13
SOX2P48431 RNU6-163P-201ENST00000384396 106 ntBASIC1.77□□□□□ -2.13
SOX2P48431 RNU6-1135P-201ENST00000411083 103 ntBASIC1.77□□□□□ -2.13
SOX2P48431 AC006461.1-201ENST00000412637 326 ntBASIC1.77□□□□□ -2.13
SOX2P48431 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.77□□□□□ -2.13
SOX2P48431 HMGN2P19-201ENST00000425149 265 ntBASIC1.77□□□□□ -2.13
SOX2P48431 CYCTP-201ENST00000504253 315 ntBASIC1.77□□□□□ -2.13
SOX2P48431 RNA5SP153-201ENST00000516498 76 ntBASIC1.77□□□□□ -2.13
SOX2P48431 SNORD45.4-201ENST00000516629 73 ntBASIC1.77□□□□□ -2.13
SOX2P48431 RNU6-197P-201ENST00000516680 100 ntBASIC1.77□□□□□ -2.13
SOX2P48431 AL160236.1-201ENST00000556317 195 ntBASIC1.77□□□□□ -2.13
SOX2P48431 MIR3124-201ENST00000582636 67 ntBASIC1.77□□□□□ -2.13
SOX2P48431 MIR3935-201ENST00000583472 104 ntBASIC1.77□□□□□ -2.13
SOX2P48431 AC120024.3-201ENST00000603167 156 ntBASIC1.77□□□□□ -2.13
SOX2P48431 AC104465.1-201ENST00000611365 139 ntBASIC1.77□□□□□ -2.13
SOX2P48431 Y_RNA.272-201ENST00000364696 102 ntBASIC1.76□□□□□ -2.13
SOX2P48431 SNORD50B-201ENST00000364995 70 ntBASIC1.76□□□□□ -2.13
SOX2P48431 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
SOX2P48431 RNU6-239P-201ENST00000390990 99 ntBASIC1.76□□□□□ -2.13
SOX2P48431 SNORD72-201ENST00000390994 80 ntBASIC1.76□□□□□ -2.13
SOX2P48431 RNA5SP508-201ENST00000411327 119 ntBASIC1.76□□□□□ -2.13
SOX2P48431 AC244636.1-201ENST00000421152 228 ntBASIC1.76□□□□□ -2.13
SOX2P48431 CALM2P4-201ENST00000430810 426 ntBASIC1.76□□□□□ -2.13
SOX2P48431 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.76□□□□□ -2.13
SOX2P48431 RN7SL429P-201ENST00000479090 223 ntBASIC1.76□□□□□ -2.13
SOX2P48431 RN7SL489P-201ENST00000486185 223 ntBASIC1.76□□□□□ -2.13
SOX2P48431 RN7SL327P-201ENST00000488659 223 ntBASIC1.76□□□□□ -2.13
SOX2P48431 RNA5SP168-201ENST00000516642 112 ntBASIC1.76□□□□□ -2.13
SOX2P48431 RNU6-1212P-201ENST00000517023 104 ntBASIC1.76□□□□□ -2.13
SOX2P48431 MIR4448-201ENST00000584360 86 ntBASIC1.76□□□□□ -2.13
SOX2P48431 AC021506.2-201ENST00000612354 169 ntBASIC1.76□□□□□ -2.13
SOX2P48431 Y_RNA.783-201ENST00000613546 102 ntBASIC1.76□□□□□ -2.13
SOX2P48431 RN7SL853P-201ENST00000617250 223 ntBASIC1.76□□□□□ -2.13
SOX2P48431 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
SOX2P48431 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
SOX2P48431 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
SOX2P48431 MIRLET7C-201ENST00000362160 84 ntBASIC1.75□□□□□ -2.13
SOX2P48431 RNU6-442P-201ENST00000383968 104 ntBASIC1.75□□□□□ -2.13
SOX2P48431 RNU6-424P-201ENST00000384367 105 ntBASIC1.75□□□□□ -2.13
SOX2P48431 U8.16-201ENST00000391279 133 ntBASIC1.75□□□□□ -2.13
SOX2P48431 RNU6-394P-201ENST00000410735 107 ntBASIC1.75□□□□□ -2.13
SOX2P48431 HMGN2P32-201ENST00000444648 269 ntBASIC1.75□□□□□ -2.13
SOX2P48431 RPL23AP6-201ENST00000446637 472 ntBASIC1.75□□□□□ -2.13
SOX2P48431 RPL23AP42-201ENST00000471152 471 ntBASIC1.75□□□□□ -2.13
SOX2P48431 RNU6-365P-201ENST00000517113 106 ntBASIC1.75□□□□□ -2.13
SOX2P48431 MIR3144-201ENST00000579460 79 ntBASIC1.75□□□□□ -2.13
SOX2P48431 MIR4672-201ENST00000583126 81 ntBASIC1.75□□□□□ -2.13
SOX2P48431 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.75□□□□□ -2.13
SOX2P48431 SNRPGP19-201ENST00000603826 189 ntBASIC1.75□□□□□ -2.13
SOX2P48431 AC027279.3-201ENST00000625055 122 ntBASIC1.75□□□□□ -2.13
SOX2P48431 Y_RNA.8-201ENST00000362353 102 ntBASIC1.74□□□□□ -2.13
SOX2P48431 Y_RNA.634-201ENST00000364811 113 ntBASIC1.74□□□□□ -2.13
SOX2P48431 Y_RNA.336-201ENST00000365307 109 ntBASIC1.74□□□□□ -2.13
SOX2P48431 Y_RNA.337-201ENST00000365312 102 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms