Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RNA5SP259-201ENST00000365541 109 ntBASIC1.09□□□□□ -2.23
HMGCLP35914 RNU6-738P-201ENST00000384531 106 ntBASIC1.09□□□□□ -2.23
HMGCLP35914 MIR526A1-201ENST00000384897 85 ntBASIC1.09□□□□□ -2.23
HMGCLP35914 Y_RNA.602-201ENST00000410535 92 ntBASIC1.09□□□□□ -2.23
HMGCLP35914 RNU6-1203P-201ENST00000410703 110 ntBASIC1.09□□□□□ -2.23
HMGCLP35914 RNU6-321P-201ENST00000410912 106 ntBASIC1.09□□□□□ -2.23
HMGCLP35914 MRPL35P3-201ENST00000421557 364 ntBASIC1.09□□□□□ -2.23
HMGCLP35914 Y_RNA.638-201ENST00000459374 113 ntBASIC1.09□□□□□ -2.23
HMGCLP35914 AC005840.1-201ENST00000498412 377 ntBASIC1.09□□□□□ -2.23
HMGCLP35914 RNU2-31P-201ENST00000516954 155 ntBASIC1.09□□□□□ -2.23
HMGCLP35914 AC068700.1-201ENST00000565862 3754 ntBASIC1.08□□□□□ -2.24
HMGCLP35914 Y_RNA.796-201ENST00000364268 102 ntBASIC1.08□□□□□ -2.24
HMGCLP35914 Y_RNA.799-201ENST00000364992 102 ntBASIC1.08□□□□□ -2.24
HMGCLP35914 SNORA70.7-201ENST00000384159 133 ntBASIC1.08□□□□□ -2.24
HMGCLP35914 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
HMGCLP35914 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
HMGCLP35914 MIR891A-201ENST00000401237 79 ntBASIC1.08□□□□□ -2.24
HMGCLP35914 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.08□□□□□ -2.24
HMGCLP35914 SNRPGP14-201ENST00000435400 219 ntBASIC1.08□□□□□ -2.24
HMGCLP35914 RPS29P28-201ENST00000446439 141 ntBASIC1.08□□□□□ -2.24
HMGCLP35914 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
HMGCLP35914 TRMT112P2-201ENST00000512910 132 ntBASIC1.08□□□□□ -2.24
HMGCLP35914 Y_RNA.720-201ENST00000517166 92 ntBASIC1.08□□□□□ -2.24
HMGCLP35914 RNU6-1116P-201ENST00000517269 99 ntBASIC1.08□□□□□ -2.24
HMGCLP35914 AC019176.1-201ENST00000518519 225 ntBASIC1.08□□□□□ -2.24
HMGCLP35914 MIR4778-201ENST00000577635 80 ntBASIC1.08□□□□□ -2.24
HMGCLP35914 MIR4295-201ENST00000585286 85 ntBASIC1.08□□□□□ -2.24
HMGCLP35914 AC087685.1-201ENST00000587507 141 ntBASIC1.08□□□□□ -2.24
HMGCLP35914 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
HMGCLP35914 AL021707.8-201ENST00000609428 183 ntBASIC1.08□□□□□ -2.24
HMGCLP35914 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.08□□□□□ -2.24
HMGCLP35914 RNU6-1272P-201ENST00000362776 107 ntBASIC1.07□□□□□ -2.24
HMGCLP35914 RNU6-899P-201ENST00000363947 107 ntBASIC1.07□□□□□ -2.24
HMGCLP35914 RNU6-1011P-201ENST00000384668 107 ntBASIC1.07□□□□□ -2.24
HMGCLP35914 RNU6-763P-201ENST00000390865 106 ntBASIC1.07□□□□□ -2.24
HMGCLP35914 MIR1285-1-201ENST00000408593 84 ntBASIC1.07□□□□□ -2.24
HMGCLP35914 RNU6-1054P-201ENST00000411293 104 ntBASIC1.07□□□□□ -2.24
HMGCLP35914 AC087343.1-201ENST00000477341 475 ntBASIC1.07□□□□□ -2.24
HMGCLP35914 NDUFA4P2-201ENST00000489989 244 ntBASIC1.07□□□□□ -2.24
HMGCLP35914 AC117454.1-201ENST00000491120 168 ntBASIC1.07□□□□□ -2.24
HMGCLP35914 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.07□□□□□ -2.24
HMGCLP35914 AC114811.1-201ENST00000507207 168 ntBASIC1.07□□□□□ -2.24
HMGCLP35914 RNU6-1053P-201ENST00000515930 101 ntBASIC1.07□□□□□ -2.24
HMGCLP35914 RNU7-12P-201ENST00000516030 62 ntBASIC1.07□□□□□ -2.24
HMGCLP35914 SNORA27.4-201ENST00000516650 95 ntBASIC1.07□□□□□ -2.24
HMGCLP35914 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.07□□□□□ -2.24
HMGCLP35914 MIR3937-201ENST00000580135 106 ntBASIC1.07□□□□□ -2.24
HMGCLP35914 AC005357.1-201ENST00000588399 301 ntBASIC1.07□□□□□ -2.24
HMGCLP35914 AC006504.6-201ENST00000590142 199 ntBASIC1.07□□□□□ -2.24
HMGCLP35914 GHRLOS.1-201ENST00000610995 70 ntBASIC1.07□□□□□ -2.24
HMGCLP35914 AP001282.2-201ENST00000616149 309 ntBASIC1.07□□□□□ -2.24
HMGCLP35914 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
HMGCLP35914 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
HMGCLP35914 MIR335-201ENST00000362173 94 ntBASIC1.06□□□□□ -2.24
HMGCLP35914 Y_RNA.145-201ENST00000363527 102 ntBASIC1.06□□□□□ -2.24
HMGCLP35914 RNU6-1048P-201ENST00000364054 107 ntBASIC1.06□□□□□ -2.24
HMGCLP35914 Y_RNA.336-201ENST00000365307 109 ntBASIC1.06□□□□□ -2.24
HMGCLP35914 RNU6-144P-201ENST00000383951 107 ntBASIC1.06□□□□□ -2.24
HMGCLP35914 MIR1278-201ENST00000408753 81 ntBASIC1.06□□□□□ -2.24
HMGCLP35914 SNORA36B-201ENST00000410438 131 ntBASIC1.06□□□□□ -2.24
HMGCLP35914 AC093850.1-201ENST00000454121 251 ntBASIC1.06□□□□□ -2.24
HMGCLP35914 SNORD11-201ENST00000459124 84 ntBASIC1.06□□□□□ -2.24
HMGCLP35914 RNU6-437P-201ENST00000459408 95 ntBASIC1.06□□□□□ -2.24
HMGCLP35914 AC091959.1-201ENST00000495857 238 ntBASIC1.06□□□□□ -2.24
HMGCLP35914 SERF1AP1-201ENST00000514575 187 ntBASIC1.06□□□□□ -2.24
HMGCLP35914 RNY3P15-201ENST00000516297 97 ntBASIC1.06□□□□□ -2.24
HMGCLP35914 RNU6-1338P-201ENST00000516328 91 ntBASIC1.06□□□□□ -2.24
HMGCLP35914 AL117187.1-201ENST00000555482 181 ntBASIC1.06□□□□□ -2.24
HMGCLP35914 AC013791.1-201ENST00000616619 62 ntBASIC1.06□□□□□ -2.24
HMGCLP35914 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.05□□□□□ -2.24
HMGCLP35914 Y_RNA.16-201ENST00000362421 102 ntBASIC1.05□□□□□ -2.24
HMGCLP35914 SNORD68-201ENST00000363214 84 ntBASIC1.05□□□□□ -2.24
HMGCLP35914 SNORA63-201ENST00000363450 132 ntBASIC1.05□□□□□ -2.24
HMGCLP35914 RNU6-1209P-201ENST00000363655 107 ntBASIC1.05□□□□□ -2.24
HMGCLP35914 SNORD50B-201ENST00000364995 70 ntBASIC1.05□□□□□ -2.24
HMGCLP35914 MIR606-201ENST00000384851 96 ntBASIC1.05□□□□□ -2.24
HMGCLP35914 AL358176.2-201ENST00000425769 204 ntBASIC1.05□□□□□ -2.24
HMGCLP35914 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.05□□□□□ -2.24
HMGCLP35914 SNRPGP10-201ENST00000432323 225 ntBASIC1.05□□□□□ -2.24
HMGCLP35914 DYNLT3P2-201ENST00000442517 295 ntBASIC1.05□□□□□ -2.24
HMGCLP35914 MTND5P22-201ENST00000458380 195 ntBASIC1.05□□□□□ -2.24
HMGCLP35914 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.05□□□□□ -2.24
HMGCLP35914 RNU7-40P-201ENST00000516397 64 ntBASIC1.05□□□□□ -2.24
HMGCLP35914 CYP3A52P-201ENST00000563326 91 ntBASIC1.05□□□□□ -2.24
HMGCLP35914 MIR5688-201ENST00000580619 83 ntBASIC1.05□□□□□ -2.24
HMGCLP35914 HSPE1P19-201ENST00000603327 295 ntBASIC1.05□□□□□ -2.24
HMGCLP35914 SNORD114-21-201ENST00000606412 72 ntBASIC1.05□□□□□ -2.24
HMGCLP35914 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.05□□□□□ -2.24
HMGCLP35914 AC091895.1-201ENST00000624494 256 ntBASIC1.05□□□□□ -2.24
HMGCLP35914 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
HMGCLP35914 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
HMGCLP35914 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
HMGCLP35914 RNY1P10-201ENST00000363268 113 ntBASIC1.04□□□□□ -2.24
HMGCLP35914 SNORA22-201ENST00000383907 134 ntBASIC1.04□□□□□ -2.24
HMGCLP35914 RNU6-472P-201ENST00000384299 107 ntBASIC1.04□□□□□ -2.24
HMGCLP35914 SNORA22C-201ENST00000384614 134 ntBASIC1.04□□□□□ -2.24
HMGCLP35914 MIR452-201ENST00000385020 85 ntBASIC1.04□□□□□ -2.24
HMGCLP35914 SNORA53-201ENST00000391141 249 ntBASIC1.04□□□□□ -2.24
HMGCLP35914 MIR1298-201ENST00000408783 112 ntBASIC1.04□□□□□ -2.24
HMGCLP35914 HMGN2P32-201ENST00000444648 269 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms