Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SLC6A4P31645 Y_RNA.170-201ENST00000363746 110 ntBASIC2.15□□□□□ -2.07
SLC6A4P31645 SNORD45.3-201ENST00000363836 72 ntBASIC2.15□□□□□ -2.07
SLC6A4P31645 SNORA63D-201ENST00000364359 132 ntBASIC2.15□□□□□ -2.07
SLC6A4P31645 RNU6-804P-201ENST00000384286 107 ntBASIC2.15□□□□□ -2.07
SLC6A4P31645 MIR520A-201ENST00000384862 85 ntBASIC2.15□□□□□ -2.07
SLC6A4P31645 AL392103.1-201ENST00000447000 198 ntBASIC2.15□□□□□ -2.07
SLC6A4P31645 RPS27P1-201ENST00000450552 247 ntBASIC2.15□□□□□ -2.07
SLC6A4P31645 RNU7-121P-201ENST00000516604 62 ntBASIC2.15□□□□□ -2.07
SLC6A4P31645 AC021753.1-201ENST00000635724 168 ntBASIC2.15□□□□□ -2.07
SLC6A4P31645 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SLC6A4P31645 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SLC6A4P31645 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SLC6A4P31645 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SLC6A4P31645 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
SLC6A4P31645 MIR126-201ENST00000362291 85 ntBASIC2.14□□□□□ -2.07
SLC6A4P31645 RNU6-131P-201ENST00000391144 107 ntBASIC2.14□□□□□ -2.07
SLC6A4P31645 RNA5SP247-201ENST00000411181 105 ntBASIC2.14□□□□□ -2.07
SLC6A4P31645 AL445646.1-201ENST00000431784 216 ntBASIC2.14□□□□□ -2.07
SLC6A4P31645 SNRPGP8-201ENST00000454064 226 ntBASIC2.14□□□□□ -2.07
SLC6A4P31645 RNU7-200P-201ENST00000516105 62 ntBASIC2.14□□□□□ -2.07
SLC6A4P31645 RNU6-197P-201ENST00000516680 100 ntBASIC2.14□□□□□ -2.07
SLC6A4P31645 IGLV3-17-201ENST00000519099 244 ntBASIC2.14□□□□□ -2.07
SLC6A4P31645 SUB1P4-201ENST00000566062 339 ntBASIC2.14□□□□□ -2.07
SLC6A4P31645 MIR4762-201ENST00000585261 75 ntBASIC2.14□□□□□ -2.07
SLC6A4P31645 Y_RNA.783-201ENST00000613546 102 ntBASIC2.14□□□□□ -2.07
SLC6A4P31645 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.14□□□□□ -2.07
SLC6A4P31645 ZNF720P1-201ENST00000562403 1939 ntBASIC2.14□□□□□ -2.07
SLC6A4P31645 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
SLC6A4P31645 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SLC6A4P31645 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
SLC6A4P31645 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SLC6A4P31645 U8.5-201ENST00000364528 136 ntBASIC2.13□□□□□ -2.07
SLC6A4P31645 Y_RNA.265-201ENST00000364677 108 ntBASIC2.13□□□□□ -2.07
SLC6A4P31645 Y_RNA.398-201ENST00000383952 99 ntBASIC2.13□□□□□ -2.07
SLC6A4P31645 SNORD116-18-201ENST00000383961 92 ntBASIC2.13□□□□□ -2.07
SLC6A4P31645 RNA5SP109-201ENST00000391010 116 ntBASIC2.13□□□□□ -2.07
SLC6A4P31645 RN7SKP200-201ENST00000410564 320 ntBASIC2.13□□□□□ -2.07
SLC6A4P31645 RNA5SP501-201ENST00000410990 112 ntBASIC2.13□□□□□ -2.07
SLC6A4P31645 Y_RNA.622-201ENST00000411091 108 ntBASIC2.13□□□□□ -2.07
SLC6A4P31645 AC006461.1-201ENST00000412637 326 ntBASIC2.13□□□□□ -2.07
SLC6A4P31645 FTH1P12-201ENST00000432137 551 ntBASIC2.13□□□□□ -2.07
SLC6A4P31645 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SLC6A4P31645 RNVU1-2-201ENST00000516326 135 ntBASIC2.13□□□□□ -2.07
SLC6A4P31645 RNU7-149P-201ENST00000516739 59 ntBASIC2.13□□□□□ -2.07
SLC6A4P31645 RNA5SP481-201ENST00000516814 122 ntBASIC2.13□□□□□ -2.07
SLC6A4P31645 DNAJC19P2-201ENST00000593340 302 ntBASIC2.13□□□□□ -2.07
SLC6A4P31645 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.13□□□□□ -2.07
SLC6A4P31645 AL591926.4-201ENST00000616895 298 ntBASIC2.13□□□□□ -2.07
SLC6A4P31645 MIR8054-201ENST00000620877 86 ntBASIC2.13□□□□□ -2.07
SLC6A4P31645 Y_RNA.8-201ENST00000362353 102 ntBASIC2.12□□□□□ -2.07
SLC6A4P31645 RNU6-484P-201ENST00000384016 107 ntBASIC2.12□□□□□ -2.07
SLC6A4P31645 Y_RNA.506-201ENST00000384494 102 ntBASIC2.12□□□□□ -2.07
SLC6A4P31645 MIR522-201ENST00000385071 87 ntBASIC2.12□□□□□ -2.07
SLC6A4P31645 RNU6-440P-201ENST00000390882 105 ntBASIC2.12□□□□□ -2.07
SLC6A4P31645 RNU2-70P-201ENST00000410718 179 ntBASIC2.12□□□□□ -2.07
SLC6A4P31645 RNA5SP450-201ENST00000411206 102 ntBASIC2.12□□□□□ -2.07
SLC6A4P31645 HMGN2P23-201ENST00000456759 269 ntBASIC2.12□□□□□ -2.07
SLC6A4P31645 RNU6-561P-201ENST00000516222 102 ntBASIC2.12□□□□□ -2.07
SLC6A4P31645 AC097639.2-201ENST00000603159 172 ntBASIC2.12□□□□□ -2.07
SLC6A4P31645 Pinc.1-201ENST00000616452 154 ntBASIC2.12□□□□□ -2.07
SLC6A4P31645 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SLC6A4P31645 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SLC6A4P31645 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.11□□□□□ -2.07
SLC6A4P31645 AL034345.1-201ENST00000407768 123 ntBASIC2.11□□□□□ -2.07
SLC6A4P31645 RNU2-7P-201ENST00000410794 178 ntBASIC2.11□□□□□ -2.07
SLC6A4P31645 RPL30P13-201ENST00000418873 348 ntBASIC2.11□□□□□ -2.07
SLC6A4P31645 AL606517.2-201ENST00000442855 241 ntBASIC2.11□□□□□ -2.07
SLC6A4P31645 NDUFA4P2-201ENST00000489989 244 ntBASIC2.11□□□□□ -2.07
SLC6A4P31645 RNU2-19P-201ENST00000517288 84 ntBASIC2.11□□□□□ -2.07
SLC6A4P31645 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.11□□□□□ -2.07
SLC6A4P31645 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.11□□□□□ -2.07
SLC6A4P31645 MIR3646-201ENST00000578301 84 ntBASIC2.11□□□□□ -2.07
SLC6A4P31645 MIR5694-201ENST00000581190 76 ntBASIC2.11□□□□□ -2.07
SLC6A4P31645 MIR3133-201ENST00000583157 78 ntBASIC2.11□□□□□ -2.07
SLC6A4P31645 AC008507.4-201ENST00000585464 127 ntBASIC2.11□□□□□ -2.07
SLC6A4P31645 Y_RNA.778-201ENST00000620203 90 ntBASIC2.11□□□□□ -2.07
SLC6A4P31645 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.1□□□□□ -2.07
SLC6A4P31645 RNU6-112P-201ENST00000363599 104 ntBASIC2.1□□□□□ -2.07
SLC6A4P31645 RNA5SP37-201ENST00000365420 130 ntBASIC2.1□□□□□ -2.07
SLC6A4P31645 Y_RNA.400-201ENST00000383963 111 ntBASIC2.1□□□□□ -2.07
SLC6A4P31645 RNU6-125P-201ENST00000384505 107 ntBASIC2.1□□□□□ -2.07
SLC6A4P31645 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.1□□□□□ -2.07
SLC6A4P31645 AC121758.2-201ENST00000553271 193 ntBASIC2.1□□□□□ -2.07
SLC6A4P31645 MIR378D2-201ENST00000580636 98 ntBASIC2.1□□□□□ -2.07
SLC6A4P31645 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SLC6A4P31645 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.09□□□□□ -2.07
SLC6A4P31645 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SLC6A4P31645 SNORD68-201ENST00000363214 84 ntBASIC2.09□□□□□ -2.07
SLC6A4P31645 Y_RNA.393-201ENST00000383936 102 ntBASIC2.09□□□□□ -2.07
SLC6A4P31645 Y_RNA.521-201ENST00000384560 114 ntBASIC2.09□□□□□ -2.07
SLC6A4P31645 MIR802-201ENST00000390235 94 ntBASIC2.09□□□□□ -2.07
SLC6A4P31645 SNORA12.1-201ENST00000390873 148 ntBASIC2.09□□□□□ -2.07
SLC6A4P31645 RNU4-61P-201ENST00000411243 107 ntBASIC2.09□□□□□ -2.07
SLC6A4P31645 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SLC6A4P31645 MLLT10P1-201ENST00000418346 262 ntBASIC2.09□□□□□ -2.07
SLC6A4P31645 STAG3L5P-204ENST00000443759 179 ntBASIC2.09□□□□□ -2.07
SLC6A4P31645 SNORD116-25-201ENST00000516517 92 ntBASIC2.09□□□□□ -2.07
SLC6A4P31645 RNU6-365P-201ENST00000517113 106 ntBASIC2.09□□□□□ -2.07
SLC6A4P31645 MTND5P41-201ENST00000517498 206 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms