Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 MIR676-201ENST00000390702 67 ntBASIC2.22□□□□□ -2.05
CNGA1P29973 RNA5SP338-201ENST00000410495 85 ntBASIC2.22□□□□□ -2.05
CNGA1P29973 CALM2P4-201ENST00000430810 426 ntBASIC2.22□□□□□ -2.05
CNGA1P29973 SNORA25.15-201ENST00000516487 89 ntBASIC2.22□□□□□ -2.05
CNGA1P29973 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.22□□□□□ -2.05
CNGA1P29973 SNORA77B-201ENST00000578179 125 ntBASIC2.22□□□□□ -2.05
CNGA1P29973 AL021707.8-201ENST00000609428 183 ntBASIC2.22□□□□□ -2.05
CNGA1P29973 JPX_2.1-201ENST00000614161 69 ntBASIC2.22□□□□□ -2.05
CNGA1P29973 AC095038.3-201ENST00000634439 195 ntBASIC2.22□□□□□ -2.05
CNGA1P29973 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CNGA1P29973 MIR424-201ENST00000362227 98 ntBASIC2.21□□□□□ -2.06
CNGA1P29973 RNU6-1123P-201ENST00000362347 106 ntBASIC2.21□□□□□ -2.06
CNGA1P29973 Y_RNA.262-201ENST00000364641 102 ntBASIC2.21□□□□□ -2.06
CNGA1P29973 MIR626-201ENST00000385032 94 ntBASIC2.21□□□□□ -2.06
CNGA1P29973 U8.16-201ENST00000391279 133 ntBASIC2.21□□□□□ -2.06
CNGA1P29973 MIR1267-201ENST00000408723 78 ntBASIC2.21□□□□□ -2.06
CNGA1P29973 MIR1278-201ENST00000408753 81 ntBASIC2.21□□□□□ -2.06
CNGA1P29973 RN7SKP101-201ENST00000411376 320 ntBASIC2.21□□□□□ -2.06
CNGA1P29973 RPL30P13-201ENST00000418873 348 ntBASIC2.21□□□□□ -2.06
CNGA1P29973 AC003989.2-201ENST00000440224 169 ntBASIC2.21□□□□□ -2.06
CNGA1P29973 PGBD4P5-201ENST00000445958 426 ntBASIC2.21□□□□□ -2.06
CNGA1P29973 SNORD11-201ENST00000459124 84 ntBASIC2.21□□□□□ -2.06
CNGA1P29973 AC025033.1-201ENST00000463883 194 ntBASIC2.21□□□□□ -2.06
CNGA1P29973 RNA5SP168-201ENST00000516642 112 ntBASIC2.21□□□□□ -2.06
CNGA1P29973 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.21□□□□□ -2.06
CNGA1P29973 RPL23AP91-201ENST00000569211 455 ntBASIC2.21□□□□□ -2.06
CNGA1P29973 ZNF355P-201ENST00000427301 3216 ntBASIC2.21□□□□□ -2.06
CNGA1P29973 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
CNGA1P29973 RNA5SP160-201ENST00000364866 120 ntBASIC2.2□□□□□ -2.06
CNGA1P29973 RNA5SP190-201ENST00000365222 118 ntBASIC2.2□□□□□ -2.06
CNGA1P29973 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.2□□□□□ -2.06
CNGA1P29973 AL021397.1-201ENST00000451806 248 ntBASIC2.2□□□□□ -2.06
CNGA1P29973 SNORD13-201ENST00000459299 104 ntBASIC2.2□□□□□ -2.06
CNGA1P29973 RNA5SP364-201ENST00000516938 78 ntBASIC2.2□□□□□ -2.06
CNGA1P29973 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.2□□□□□ -2.06
CNGA1P29973 MIR5089-201ENST00000580047 84 ntBASIC2.2□□□□□ -2.06
CNGA1P29973 AC009779.6-201ENST00000603972 165 ntBASIC2.2□□□□□ -2.06
CNGA1P29973 snoU13.31-201ENST00000607291 104 ntBASIC2.2□□□□□ -2.06
CNGA1P29973 MIR7111-201ENST00000619751 72 ntBASIC2.2□□□□□ -2.06
CNGA1P29973 RNU6-457P-201ENST00000363999 107 ntBASIC2.19□□□□□ -2.06
CNGA1P29973 MIR30A-201ENST00000385092 71 ntBASIC2.19□□□□□ -2.06
CNGA1P29973 MIR660-201ENST00000385235 97 ntBASIC2.19□□□□□ -2.06
CNGA1P29973 RNA5SP496-201ENST00000391240 109 ntBASIC2.19□□□□□ -2.06
CNGA1P29973 Y_RNA.626-201ENST00000411288 95 ntBASIC2.19□□□□□ -2.06
CNGA1P29973 RNU1-40P-201ENST00000516816 164 ntBASIC2.19□□□□□ -2.06
CNGA1P29973 RNU1-97P-201ENST00000516872 164 ntBASIC2.19□□□□□ -2.06
CNGA1P29973 SNORA44.1-201ENST00000517031 108 ntBASIC2.19□□□□□ -2.06
CNGA1P29973 AC141273.2-201ENST00000618989 130 ntBASIC2.19□□□□□ -2.06
CNGA1P29973 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CNGA1P29973 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CNGA1P29973 RNU6-131P-201ENST00000391144 107 ntBASIC2.18□□□□□ -2.06
CNGA1P29973 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.18□□□□□ -2.06
CNGA1P29973 AC004965.1-201ENST00000413033 213 ntBASIC2.18□□□□□ -2.06
CNGA1P29973 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.18□□□□□ -2.06
CNGA1P29973 NDUFA4P2-201ENST00000489989 244 ntBASIC2.18□□□□□ -2.06
CNGA1P29973 CYCTP-201ENST00000504253 315 ntBASIC2.18□□□□□ -2.06
CNGA1P29973 RNU6-388P-201ENST00000517012 105 ntBASIC2.18□□□□□ -2.06
CNGA1P29973 RNU6-389P-201ENST00000517048 105 ntBASIC2.18□□□□□ -2.06
CNGA1P29973 Y_RNA.714-201ENST00000517065 90 ntBASIC2.18□□□□□ -2.06
CNGA1P29973 MIR3935-201ENST00000583472 104 ntBASIC2.18□□□□□ -2.06
CNGA1P29973 AC087685.1-201ENST00000587507 141 ntBASIC2.18□□□□□ -2.06
CNGA1P29973 AC120024.3-201ENST00000603167 156 ntBASIC2.18□□□□□ -2.06
CNGA1P29973 MIR8081-201ENST00000611533 95 ntBASIC2.18□□□□□ -2.06
CNGA1P29973 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.17□□□□□ -2.06
CNGA1P29973 Y_RNA.24-201ENST00000362508 103 ntBASIC2.17□□□□□ -2.06
CNGA1P29973 Y_RNA.552-201ENST00000384665 112 ntBASIC2.17□□□□□ -2.06
CNGA1P29973 Y_RNA.572-201ENST00000384757 98 ntBASIC2.17□□□□□ -2.06
CNGA1P29973 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CNGA1P29973 MIR1298-201ENST00000408783 112 ntBASIC2.17□□□□□ -2.06
CNGA1P29973 MLLT10P1-201ENST00000418346 262 ntBASIC2.17□□□□□ -2.06
CNGA1P29973 BTF3P4-201ENST00000418852 495 ntBASIC2.17□□□□□ -2.06
CNGA1P29973 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.17□□□□□ -2.06
CNGA1P29973 AC078938.1-201ENST00000620993 318 ntBASIC2.17□□□□□ -2.06
CNGA1P29973 AC027279.3-201ENST00000625055 122 ntBASIC2.17□□□□□ -2.06
CNGA1P29973 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CNGA1P29973 MIR337-201ENST00000362281 93 ntBASIC2.16□□□□□ -2.06
CNGA1P29973 Y_RNA.229-201ENST00000364347 113 ntBASIC2.16□□□□□ -2.06
CNGA1P29973 RNU4-17P-201ENST00000365598 141 ntBASIC2.16□□□□□ -2.06
CNGA1P29973 MIR3198-2-201ENST00000577868 80 ntBASIC2.16□□□□□ -2.06
CNGA1P29973 AC084768.2-201ENST00000622736 221 ntBASIC2.16□□□□□ -2.06
CNGA1P29973 RNU6-833P-201ENST00000363486 107 ntBASIC2.15□□□□□ -2.07
CNGA1P29973 Y_RNA.200-201ENST00000364018 102 ntBASIC2.15□□□□□ -2.07
CNGA1P29973 snoU2_19.4-201ENST00000364329 80 ntBASIC2.15□□□□□ -2.07
CNGA1P29973 RNU6-381P-201ENST00000391259 108 ntBASIC2.15□□□□□ -2.07
CNGA1P29973 RNU6-1116P-201ENST00000517269 99 ntBASIC2.15□□□□□ -2.07
CNGA1P29973 AC015688.6-201ENST00000577737 104 ntBASIC2.15□□□□□ -2.07
CNGA1P29973 SNORD3E-202ENST00000627253 216 ntBASIC2.15□□□□□ -2.07
CNGA1P29973 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.14□□□□□ -2.07
CNGA1P29973 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CNGA1P29973 Y_RNA.199-201ENST00000364014 102 ntBASIC2.14□□□□□ -2.07
CNGA1P29973 AC005908.1-201ENST00000468701 347 ntBASIC2.14□□□□□ -2.07
CNGA1P29973 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.14□□□□□ -2.07
CNGA1P29973 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.14□□□□□ -2.07
CNGA1P29973 AC130289.1-201ENST00000577321 73 ntBASIC2.14□□□□□ -2.07
CNGA1P29973 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.14□□□□□ -2.07
CNGA1P29973 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CNGA1P29973 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CNGA1P29973 SNORD50B-201ENST00000364995 70 ntBASIC2.13□□□□□ -2.07
CNGA1P29973 snoU2-30.1-201ENST00000365012 70 ntBASIC2.13□□□□□ -2.07
CNGA1P29973 RNU6-163P-201ENST00000384396 106 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 220.2 ms