Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RNU7-116P-201ENST00000516940 62 ntBASIC1.46□□□□□ -2.18
SHC1P29353 RNU6-1096P-201ENST00000517089 102 ntBASIC1.46□□□□□ -2.18
SHC1P29353 AC011604.1-201ENST00000545978 196 ntBASIC1.46□□□□□ -2.18
SHC1P29353 MIR4255-201ENST00000579351 72 ntBASIC1.46□□□□□ -2.18
SHC1P29353 AC005786.1-201ENST00000588553 154 ntBASIC1.46□□□□□ -2.18
SHC1P29353 AC072026.1-201ENST00000605023 201 ntBASIC1.46□□□□□ -2.18
SHC1P29353 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.46□□□□□ -2.18
SHC1P29353 Y_RNA.7-201ENST00000362352 102 ntBASIC1.45□□□□□ -2.18
SHC1P29353 Y_RNA.270-201ENST00000364693 104 ntBASIC1.45□□□□□ -2.18
SHC1P29353 RNU4-17P-201ENST00000365598 141 ntBASIC1.45□□□□□ -2.18
SHC1P29353 Y_RNA.435-201ENST00000384095 112 ntBASIC1.45□□□□□ -2.18
SHC1P29353 RNU6-209P-201ENST00000384118 107 ntBASIC1.45□□□□□ -2.18
SHC1P29353 SNORA72-201ENST00000384339 132 ntBASIC1.45□□□□□ -2.18
SHC1P29353 Y_RNA.555-201ENST00000384673 110 ntBASIC1.45□□□□□ -2.18
SHC1P29353 RNA5SP323-201ENST00000391094 133 ntBASIC1.45□□□□□ -2.18
SHC1P29353 AC245047.4-201ENST00000433189 144 ntBASIC1.45□□□□□ -2.18
SHC1P29353 RPS27P1-201ENST00000450552 247 ntBASIC1.45□□□□□ -2.18
SHC1P29353 AC245047.8-201ENST00000456455 284 ntBASIC1.45□□□□□ -2.18
SHC1P29353 RNU6-437P-201ENST00000459408 95 ntBASIC1.45□□□□□ -2.18
SHC1P29353 RNU6-1291P-201ENST00000516591 104 ntBASIC1.45□□□□□ -2.18
SHC1P29353 MRPS18CP4-201ENST00000535821 231 ntBASIC1.45□□□□□ -2.18
SHC1P29353 AC084364.2-201ENST00000546924 395 ntBASIC1.45□□□□□ -2.18
SHC1P29353 MIR5094-201ENST00000578766 85 ntBASIC1.45□□□□□ -2.18
SHC1P29353 MIR4724-201ENST00000579485 89 ntBASIC1.45□□□□□ -2.18
SHC1P29353 AC022217.4-201ENST00000604389 163 ntBASIC1.45□□□□□ -2.18
SHC1P29353 MIR6079-201ENST00000635807 62 ntBASIC1.45□□□□□ -2.18
SHC1P29353 U6.106-201ENST00000636360 105 ntBASIC1.45□□□□□ -2.18
SHC1P29353 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.45□□□□□ -2.18
SHC1P29353 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
SHC1P29353 AC018630.2-201ENST00000534866 2403 ntBASIC1.44□□□□□ -2.18
SHC1P29353 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SHC1P29353 RNU6-674P-201ENST00000363831 107 ntBASIC1.44□□□□□ -2.18
SHC1P29353 Y_RNA.180-201ENST00000363867 113 ntBASIC1.44□□□□□ -2.18
SHC1P29353 Y_RNA.229-201ENST00000364347 113 ntBASIC1.44□□□□□ -2.18
SHC1P29353 Y_RNA.267-201ENST00000364679 109 ntBASIC1.44□□□□□ -2.18
SHC1P29353 MIR1323-201ENST00000408090 73 ntBASIC1.44□□□□□ -2.18
SHC1P29353 RNA5SP501-201ENST00000410990 112 ntBASIC1.44□□□□□ -2.18
SHC1P29353 AC233266.1-201ENST00000454518 96 ntBASIC1.44□□□□□ -2.18
SHC1P29353 RNA5SP57-201ENST00000459463 123 ntBASIC1.44□□□□□ -2.18
SHC1P29353 RNU6-561P-201ENST00000516222 102 ntBASIC1.44□□□□□ -2.18
SHC1P29353 AC024995.1-201ENST00000523014 93 ntBASIC1.44□□□□□ -2.18
SHC1P29353 AC242852.1-201ENST00000612151 96 ntBASIC1.44□□□□□ -2.18
SHC1P29353 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.44□□□□□ -2.18
SHC1P29353 AC244015.1-201ENST00000622301 99 ntBASIC1.44□□□□□ -2.18
SHC1P29353 AC100821.1-201ENST00000523153 2479 ntBASIC1.43□□□□□ -2.18
SHC1P29353 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
SHC1P29353 Y_RNA.203-201ENST00000364106 102 ntBASIC1.43□□□□□ -2.18
SHC1P29353 Y_RNA.240-201ENST00000364469 95 ntBASIC1.43□□□□□ -2.18
SHC1P29353 Y_RNA.412-201ENST00000384001 104 ntBASIC1.43□□□□□ -2.18
SHC1P29353 RNU4-70P-201ENST00000384579 139 ntBASIC1.43□□□□□ -2.18
SHC1P29353 RNA5SP109-201ENST00000391010 116 ntBASIC1.43□□□□□ -2.18
SHC1P29353 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.43□□□□□ -2.18
SHC1P29353 RNU6-341P-201ENST00000516973 96 ntBASIC1.43□□□□□ -2.18
SHC1P29353 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.43□□□□□ -2.18
SHC1P29353 MIR5688-201ENST00000580619 83 ntBASIC1.43□□□□□ -2.18
SHC1P29353 AC108706.1-201ENST00000611053 297 ntBASIC1.43□□□□□ -2.18
SHC1P29353 MIR367-201ENST00000362299 68 ntBASIC1.42□□□□□ -2.18
SHC1P29353 SNORA1B-201ENST00000362535 133 ntBASIC1.42□□□□□ -2.18
SHC1P29353 RNU6-1209P-201ENST00000363655 107 ntBASIC1.42□□□□□ -2.18
SHC1P29353 Y_RNA.182-201ENST00000363880 111 ntBASIC1.42□□□□□ -2.18
SHC1P29353 RNU6-457P-201ENST00000363999 107 ntBASIC1.42□□□□□ -2.18
SHC1P29353 Y_RNA.796-201ENST00000364268 102 ntBASIC1.42□□□□□ -2.18
SHC1P29353 Y_RNA.799-201ENST00000364992 102 ntBASIC1.42□□□□□ -2.18
SHC1P29353 RNU6-997P-201ENST00000384725 107 ntBASIC1.42□□□□□ -2.18
SHC1P29353 MIR515-2-201ENST00000384883 83 ntBASIC1.42□□□□□ -2.18
SHC1P29353 MIR515-1-201ENST00000384884 83 ntBASIC1.42□□□□□ -2.18
SHC1P29353 MIR520G-201ENST00000385064 90 ntBASIC1.42□□□□□ -2.18
SHC1P29353 MIR616-201ENST00000385293 97 ntBASIC1.42□□□□□ -2.18
SHC1P29353 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.42□□□□□ -2.18
SHC1P29353 SUB1P4-201ENST00000566062 339 ntBASIC1.42□□□□□ -2.18
SHC1P29353 MIR4303-201ENST00000581299 66 ntBASIC1.42□□□□□ -2.18
SHC1P29353 MIR4744-201ENST00000581563 82 ntBASIC1.42□□□□□ -2.18
SHC1P29353 AC103810.8-201ENST00000607347 118 ntBASIC1.42□□□□□ -2.18
SHC1P29353 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.42□□□□□ -2.18
SHC1P29353 Y_RNA.75-201ENST00000362927 97 ntBASIC1.41□□□□□ -2.18
SHC1P29353 Y_RNA.121-201ENST00000363309 113 ntBASIC1.41□□□□□ -2.18
SHC1P29353 RNU6-1019P-201ENST00000364424 107 ntBASIC1.41□□□□□ -2.18
SHC1P29353 RNU4-41P-201ENST00000364426 143 ntBASIC1.41□□□□□ -2.18
SHC1P29353 SNORA48.1-201ENST00000390879 135 ntBASIC1.41□□□□□ -2.18
SHC1P29353 RNU6-578P-201ENST00000390980 103 ntBASIC1.41□□□□□ -2.18
SHC1P29353 AL606845.1-201ENST00000404881 255 ntBASIC1.41□□□□□ -2.18
SHC1P29353 Y_RNA.621-201ENST00000411065 96 ntBASIC1.41□□□□□ -2.18
SHC1P29353 RNU6-1135P-201ENST00000411083 103 ntBASIC1.41□□□□□ -2.18
SHC1P29353 RNU5E-9P-201ENST00000411164 104 ntBASIC1.41□□□□□ -2.18
SHC1P29353 SNRPGP8-201ENST00000454064 226 ntBASIC1.41□□□□□ -2.18
SHC1P29353 Y_RNA.662-201ENST00000516028 97 ntBASIC1.41□□□□□ -2.18
SHC1P29353 RN7SKP164-201ENST00000516138 266 ntBASIC1.41□□□□□ -2.18
SHC1P29353 RNU6-1007P-201ENST00000516586 107 ntBASIC1.41□□□□□ -2.18
SHC1P29353 RPL23AP91-201ENST00000569211 455 ntBASIC1.41□□□□□ -2.18
SHC1P29353 AL645939.4-201ENST00000604495 135 ntBASIC1.41□□□□□ -2.18
SHC1P29353 AL021707.8-201ENST00000609428 183 ntBASIC1.41□□□□□ -2.18
SHC1P29353 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
SHC1P29353 Y_RNA.587-201ENST00000391210 103 ntBASIC1.4□□□□□ -2.19
SHC1P29353 SNORD11-201ENST00000459124 84 ntBASIC1.4□□□□□ -2.19
SHC1P29353 AC008834.1-201ENST00000511612 175 ntBASIC1.4□□□□□ -2.19
SHC1P29353 Y_RNA.797-201ENST00000515977 94 ntBASIC1.4□□□□□ -2.19
SHC1P29353 SNORA31.10-201ENST00000516482 106 ntBASIC1.4□□□□□ -2.19
SHC1P29353 RNU6-255P-201ENST00000516957 105 ntBASIC1.4□□□□□ -2.19
SHC1P29353 SNORA44.1-201ENST00000517031 108 ntBASIC1.4□□□□□ -2.19
SHC1P29353 AC109810.1-201ENST00000534066 224 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms