Protein–RNA interactions for Protein: P28908

TNFRSF8, Tumor necrosis factor receptor superfamily member 8, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8P28908 MT-TT-201ENST00000387460 66 ntBASIC2□□□□□ -2.09
TNFRSF8P28908 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2□□□□□ -2.09
TNFRSF8P28908 RNU6-1228P-201ENST00000391014 107 ntBASIC2□□□□□ -2.09
TNFRSF8P28908 SNORA11.4-201ENST00000408823 129 ntBASIC2□□□□□ -2.09
TNFRSF8P28908 RNU6-383P-201ENST00000410864 94 ntBASIC2□□□□□ -2.09
TNFRSF8P28908 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2□□□□□ -2.09
TNFRSF8P28908 SNORD116-25-201ENST00000516517 92 ntBASIC2□□□□□ -2.09
TNFRSF8P28908 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2□□□□□ -2.09
TNFRSF8P28908 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2□□□□□ -2.09
TNFRSF8P28908 AC127455.1-201ENST00000565496 145 ntBASIC2□□□□□ -2.09
TNFRSF8P28908 AL096840.1-201ENST00000603287 93 ntBASIC2□□□□□ -2.09
TNFRSF8P28908 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2□□□□□ -2.09
TNFRSF8P28908 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TNFRSF8P28908 RNU6-674P-201ENST00000363831 107 ntBASIC1.99□□□□□ -2.09
TNFRSF8P28908 RNU6-407P-201ENST00000365280 104 ntBASIC1.99□□□□□ -2.09
TNFRSF8P28908 Y_RNA.488-201ENST00000384403 102 ntBASIC1.99□□□□□ -2.09
TNFRSF8P28908 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
TNFRSF8P28908 RNU11-3P-201ENST00000391111 133 ntBASIC1.99□□□□□ -2.09
TNFRSF8P28908 AC123900.1-201ENST00000420390 96 ntBASIC1.99□□□□□ -2.09
TNFRSF8P28908 AC008134.1-201ENST00000420943 193 ntBASIC1.99□□□□□ -2.09
TNFRSF8P28908 AL162725.1-201ENST00000435405 301 ntBASIC1.99□□□□□ -2.09
TNFRSF8P28908 AL357134.1-201ENST00000445848 426 ntBASIC1.99□□□□□ -2.09
TNFRSF8P28908 AC245047.8-201ENST00000456455 284 ntBASIC1.99□□□□□ -2.09
TNFRSF8P28908 RNU6-561P-201ENST00000516222 102 ntBASIC1.99□□□□□ -2.09
TNFRSF8P28908 RNU7-116P-201ENST00000516940 62 ntBASIC1.99□□□□□ -2.09
TNFRSF8P28908 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.99□□□□□ -2.09
TNFRSF8P28908 POLR3GP1-201ENST00000594073 261 ntBASIC1.99□□□□□ -2.09
TNFRSF8P28908 AL773524.1-201ENST00000614065 229 ntBASIC1.99□□□□□ -2.09
TNFRSF8P28908 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.99□□□□□ -2.09
TNFRSF8P28908 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
TNFRSF8P28908 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
TNFRSF8P28908 RNU6-151P-201ENST00000364158 107 ntBASIC1.98□□□□□ -2.09
TNFRSF8P28908 Y_RNA.343-201ENST00000365354 112 ntBASIC1.98□□□□□ -2.09
TNFRSF8P28908 Y_RNA.497-201ENST00000384447 98 ntBASIC1.98□□□□□ -2.09
TNFRSF8P28908 MIR569-201ENST00000385228 96 ntBASIC1.98□□□□□ -2.09
TNFRSF8P28908 AL606845.1-201ENST00000404881 255 ntBASIC1.98□□□□□ -2.09
TNFRSF8P28908 RNA5SP511-201ENST00000410487 115 ntBASIC1.98□□□□□ -2.09
TNFRSF8P28908 AC244636.1-201ENST00000421152 228 ntBASIC1.98□□□□□ -2.09
TNFRSF8P28908 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.98□□□□□ -2.09
TNFRSF8P28908 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.98□□□□□ -2.09
TNFRSF8P28908 RNU6-1007P-201ENST00000516586 107 ntBASIC1.98□□□□□ -2.09
TNFRSF8P28908 RNU6-63P-201ENST00000516690 95 ntBASIC1.98□□□□□ -2.09
TNFRSF8P28908 AC027419.1-201ENST00000522976 328 ntBASIC1.98□□□□□ -2.09
TNFRSF8P28908 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.98□□□□□ -2.09
TNFRSF8P28908 AC015720.1-201ENST00000565251 277 ntBASIC1.98□□□□□ -2.09
TNFRSF8P28908 SNORA4-201ENST00000584302 138 ntBASIC1.98□□□□□ -2.09
TNFRSF8P28908 U2.20-201ENST00000613956 192 ntBASIC1.98□□□□□ -2.09
TNFRSF8P28908 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
TNFRSF8P28908 ZNF355P-201ENST00000427301 3216 ntBASIC1.97□□□□□ -2.09
TNFRSF8P28908 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
TNFRSF8P28908 MIR367-201ENST00000362299 68 ntBASIC1.97□□□□□ -2.09
TNFRSF8P28908 RNU6-743P-201ENST00000364151 106 ntBASIC1.97□□□□□ -2.09
TNFRSF8P28908 SNORD48-201ENST00000364953 64 ntBASIC1.97□□□□□ -2.09
TNFRSF8P28908 RNY3P5-201ENST00000384127 102 ntBASIC1.97□□□□□ -2.09
TNFRSF8P28908 SNORA67.3-201ENST00000384366 140 ntBASIC1.97□□□□□ -2.09
TNFRSF8P28908 RNU6-376P-201ENST00000384731 106 ntBASIC1.97□□□□□ -2.09
TNFRSF8P28908 MIR583-201ENST00000384846 75 ntBASIC1.97□□□□□ -2.09
TNFRSF8P28908 Y_RNA.586-201ENST00000391146 98 ntBASIC1.97□□□□□ -2.09
TNFRSF8P28908 MIR1262-201ENST00000408276 93 ntBASIC1.97□□□□□ -2.09
TNFRSF8P28908 RNU4-43P-201ENST00000410628 137 ntBASIC1.97□□□□□ -2.09
TNFRSF8P28908 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.97□□□□□ -2.09
TNFRSF8P28908 AC010409.1-201ENST00000487382 476 ntBASIC1.97□□□□□ -2.09
TNFRSF8P28908 AC107027.2-201ENST00000512197 115 ntBASIC1.97□□□□□ -2.09
TNFRSF8P28908 RNU6-856P-201ENST00000516959 98 ntBASIC1.97□□□□□ -2.09
TNFRSF8P28908 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.97□□□□□ -2.09
TNFRSF8P28908 DNAJC19P2-201ENST00000593340 302 ntBASIC1.97□□□□□ -2.09
TNFRSF8P28908 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.97□□□□□ -2.09
TNFRSF8P28908 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.97□□□□□ -2.09
TNFRSF8P28908 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
TNFRSF8P28908 RNU1-22P-201ENST00000363334 158 ntBASIC1.96□□□□□ -2.1
TNFRSF8P28908 RNU6-959P-201ENST00000384671 107 ntBASIC1.96□□□□□ -2.1
TNFRSF8P28908 SNORA17.3-201ENST00000391159 129 ntBASIC1.96□□□□□ -2.1
TNFRSF8P28908 RN7SKP101-201ENST00000411376 320 ntBASIC1.96□□□□□ -2.1
TNFRSF8P28908 AC010154.1-201ENST00000425857 269 ntBASIC1.96□□□□□ -2.1
TNFRSF8P28908 RNU6-437P-201ENST00000459408 95 ntBASIC1.96□□□□□ -2.1
TNFRSF8P28908 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.96□□□□□ -2.1
TNFRSF8P28908 SNORA44.1-201ENST00000517031 108 ntBASIC1.96□□□□□ -2.1
TNFRSF8P28908 MIR3122-201ENST00000577243 73 ntBASIC1.96□□□□□ -2.1
TNFRSF8P28908 AC024614.2-201ENST00000577584 372 ntBASIC1.96□□□□□ -2.1
TNFRSF8P28908 MIR4299-201ENST00000577899 72 ntBASIC1.96□□□□□ -2.1
TNFRSF8P28908 MIR548X2-201ENST00000579776 100 ntBASIC1.96□□□□□ -2.1
TNFRSF8P28908 AL021707.8-201ENST00000609428 183 ntBASIC1.96□□□□□ -2.1
TNFRSF8P28908 Y_RNA.783-201ENST00000613546 102 ntBASIC1.96□□□□□ -2.1
TNFRSF8P28908 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
TNFRSF8P28908 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
TNFRSF8P28908 RNU6-23P-201ENST00000363283 107 ntBASIC1.95□□□□□ -2.1
TNFRSF8P28908 RNA5SP325-201ENST00000363756 130 ntBASIC1.95□□□□□ -2.1
TNFRSF8P28908 Y_RNA.337-201ENST00000365312 102 ntBASIC1.95□□□□□ -2.1
TNFRSF8P28908 RNU6-643P-201ENST00000384018 107 ntBASIC1.95□□□□□ -2.1
TNFRSF8P28908 MIR15B-201ENST00000385045 98 ntBASIC1.95□□□□□ -2.1
TNFRSF8P28908 RNA5SP496-201ENST00000391240 109 ntBASIC1.95□□□□□ -2.1
TNFRSF8P28908 BTF3P4-201ENST00000418852 495 ntBASIC1.95□□□□□ -2.1
TNFRSF8P28908 AC060773.1-201ENST00000421698 310 ntBASIC1.95□□□□□ -2.1
TNFRSF8P28908 AL121914.1-201ENST00000450188 156 ntBASIC1.95□□□□□ -2.1
TNFRSF8P28908 RNU1-131P-201ENST00000458943 161 ntBASIC1.95□□□□□ -2.1
TNFRSF8P28908 RPS27P22-201ENST00000478056 241 ntBASIC1.95□□□□□ -2.1
TNFRSF8P28908 RPL23AP54-201ENST00000495129 419 ntBASIC1.95□□□□□ -2.1
TNFRSF8P28908 AC097462.1-201ENST00000514125 324 ntBASIC1.95□□□□□ -2.1
TNFRSF8P28908 RNU6-426P-201ENST00000516464 97 ntBASIC1.95□□□□□ -2.1
TNFRSF8P28908 MIR3658-201ENST00000636291 56 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms