Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 Y_RNA.253-201ENST00000364562 112 ntBASIC1.07□□□□□ -2.24
RPA1P27694 Y_RNA.265-201ENST00000364677 108 ntBASIC1.07□□□□□ -2.24
RPA1P27694 Y_RNA.341-201ENST00000365341 102 ntBASIC1.07□□□□□ -2.24
RPA1P27694 SNORA2.2-201ENST00000365473 135 ntBASIC1.07□□□□□ -2.24
RPA1P27694 Y_RNA.368-201ENST00000365547 113 ntBASIC1.07□□□□□ -2.24
RPA1P27694 SNORA22-201ENST00000383907 134 ntBASIC1.07□□□□□ -2.24
RPA1P27694 SNORA22C-201ENST00000384614 134 ntBASIC1.07□□□□□ -2.24
RPA1P27694 RNU6-21P-201ENST00000384710 107 ntBASIC1.07□□□□□ -2.24
RPA1P27694 MIR19B1-201ENST00000384829 87 ntBASIC1.07□□□□□ -2.24
RPA1P27694 SNORD41-201ENST00000386967 70 ntBASIC1.07□□□□□ -2.24
RPA1P27694 AL451046.2-201ENST00000403074 277 ntBASIC1.07□□□□□ -2.24
RPA1P27694 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.07□□□□□ -2.24
RPA1P27694 AC104332.1-201ENST00000440471 797 ntBASIC1.07□□□□□ -2.24
RPA1P27694 Y_RNA.637-201ENST00000459424 114 ntBASIC1.07□□□□□ -2.24
RPA1P27694 UBL5P1-201ENST00000507979 193 ntBASIC1.07□□□□□ -2.24
RPA1P27694 RNA5SP102-201ENST00000516865 106 ntBASIC1.07□□□□□ -2.24
RPA1P27694 Y_RNA.713-201ENST00000517013 96 ntBASIC1.07□□□□□ -2.24
RPA1P27694 Y_RNA.721-201ENST00000517207 102 ntBASIC1.07□□□□□ -2.24
RPA1P27694 AC024405.2-202ENST00000532731 184 ntBASIC1.07□□□□□ -2.24
RPA1P27694 AC103810.9-201ENST00000606688 112 ntBASIC1.07□□□□□ -2.24
RPA1P27694 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
RPA1P27694 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
RPA1P27694 Y_RNA.84-201ENST00000363011 104 ntBASIC1.06□□□□□ -2.24
RPA1P27694 SNORD68-201ENST00000363214 84 ntBASIC1.06□□□□□ -2.24
RPA1P27694 Y_RNA.202-201ENST00000364083 110 ntBASIC1.06□□□□□ -2.24
RPA1P27694 MIR222-201ENST00000384992 110 ntBASIC1.06□□□□□ -2.24
RPA1P27694 MT-TW-201ENST00000387382 68 ntBASIC1.06□□□□□ -2.24
RPA1P27694 RNU6-763P-201ENST00000390865 106 ntBASIC1.06□□□□□ -2.24
RPA1P27694 Y_RNA.581-201ENST00000391017 97 ntBASIC1.06□□□□□ -2.24
RPA1P27694 RNA5SP482-201ENST00000391269 118 ntBASIC1.06□□□□□ -2.24
RPA1P27694 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.06□□□□□ -2.24
RPA1P27694 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.06□□□□□ -2.24
RPA1P27694 RNU7-141P-201ENST00000459304 62 ntBASIC1.06□□□□□ -2.24
RPA1P27694 RNU6-922P-201ENST00000516753 99 ntBASIC1.06□□□□□ -2.24
RPA1P27694 RNU2-56P-201ENST00000516826 190 ntBASIC1.06□□□□□ -2.24
RPA1P27694 RNU6-570P-201ENST00000517051 105 ntBASIC1.06□□□□□ -2.24
RPA1P27694 AL358944.1-201ENST00000528537 144 ntBASIC1.06□□□□□ -2.24
RPA1P27694 AP002004.2-201ENST00000531656 154 ntBASIC1.06□□□□□ -2.24
RPA1P27694 AC005972.2-201ENST00000604690 348 ntBASIC1.06□□□□□ -2.24
RPA1P27694 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.06□□□□□ -2.24
RPA1P27694 MIR96-201ENST00000362288 78 ntBASIC1.05□□□□□ -2.24
RPA1P27694 Y_RNA.11-201ENST00000362375 109 ntBASIC1.05□□□□□ -2.24
RPA1P27694 RNU4-10P-201ENST00000364383 140 ntBASIC1.05□□□□□ -2.24
RPA1P27694 RNU6-662P-201ENST00000384253 104 ntBASIC1.05□□□□□ -2.24
RPA1P27694 MIR532-201ENST00000385025 91 ntBASIC1.05□□□□□ -2.24
RPA1P27694 Y_RNA.621-201ENST00000411065 96 ntBASIC1.05□□□□□ -2.24
RPA1P27694 MRPL35P3-201ENST00000421557 364 ntBASIC1.05□□□□□ -2.24
RPA1P27694 POLR2KP2-201ENST00000438155 177 ntBASIC1.05□□□□□ -2.24
RPA1P27694 AC114811.1-201ENST00000507207 168 ntBASIC1.05□□□□□ -2.24
RPA1P27694 AP003733.2-201ENST00000529409 171 ntBASIC1.05□□□□□ -2.24
RPA1P27694 MIR4661-201ENST00000582720 75 ntBASIC1.05□□□□□ -2.24
RPA1P27694 SNORD113-5-201ENST00000607261 78 ntBASIC1.05□□□□□ -2.24
RPA1P27694 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.05□□□□□ -2.24
RPA1P27694 MIR6767-201ENST00000637302 66 ntBASIC1.05□□□□□ -2.24
RPA1P27694 AC099654.10-201ENST00000640395 161 ntBASIC1.05□□□□□ -2.24
RPA1P27694 SNORD114-27-201ENST00000363766 70 ntBASIC1.04□□□□□ -2.24
RPA1P27694 SNORD50B-201ENST00000364995 70 ntBASIC1.04□□□□□ -2.24
RPA1P27694 Y_RNA.572-201ENST00000384757 98 ntBASIC1.04□□□□□ -2.24
RPA1P27694 MIR606-201ENST00000384851 96 ntBASIC1.04□□□□□ -2.24
RPA1P27694 MIR522-201ENST00000385071 87 ntBASIC1.04□□□□□ -2.24
RPA1P27694 RNU6-1109P-201ENST00000391187 107 ntBASIC1.04□□□□□ -2.24
RPA1P27694 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.04□□□□□ -2.24
RPA1P27694 MIR548F4-201ENST00000408515 105 ntBASIC1.04□□□□□ -2.24
RPA1P27694 MIR1276-201ENST00000408707 83 ntBASIC1.04□□□□□ -2.24
RPA1P27694 AL390729.2-201ENST00000416137 156 ntBASIC1.04□□□□□ -2.24
RPA1P27694 RPL39P39-201ENST00000455840 151 ntBASIC1.04□□□□□ -2.24
RPA1P27694 NDUFA4P2-201ENST00000489989 244 ntBASIC1.04□□□□□ -2.24
RPA1P27694 SEPT14P8-201ENST00000508026 178 ntBASIC1.04□□□□□ -2.24
RPA1P27694 RNU7-12P-201ENST00000516030 62 ntBASIC1.04□□□□□ -2.24
RPA1P27694 SCARNA15.1-201ENST00000516384 125 ntBASIC1.04□□□□□ -2.24
RPA1P27694 RNU7-115P-201ENST00000516433 55 ntBASIC1.04□□□□□ -2.24
RPA1P27694 SCARNA24.2-201ENST00000516968 130 ntBASIC1.04□□□□□ -2.24
RPA1P27694 POLR3GP1-201ENST00000594073 261 ntBASIC1.04□□□□□ -2.24
RPA1P27694 AL355297.3-201ENST00000604082 446 ntBASIC1.04□□□□□ -2.24
RPA1P27694 AP001282.2-201ENST00000616149 309 ntBASIC1.04□□□□□ -2.24
RPA1P27694 Y_RNA.117-201ENST00000363294 101 ntBASIC1.03□□□□□ -2.24
RPA1P27694 RNU6-238P-201ENST00000363313 106 ntBASIC1.03□□□□□ -2.24
RPA1P27694 Y_RNA.796-201ENST00000364268 102 ntBASIC1.03□□□□□ -2.24
RPA1P27694 Y_RNA.799-201ENST00000364992 102 ntBASIC1.03□□□□□ -2.24
RPA1P27694 Y_RNA.376-201ENST00000365638 108 ntBASIC1.03□□□□□ -2.24
RPA1P27694 SNORA72.4-201ENST00000384174 132 ntBASIC1.03□□□□□ -2.24
RPA1P27694 Y_RNA.483-201ENST00000384380 101 ntBASIC1.03□□□□□ -2.24
RPA1P27694 Y_RNA.526-201ENST00000384572 110 ntBASIC1.03□□□□□ -2.24
RPA1P27694 Y_RNA.569-201ENST00000384749 103 ntBASIC1.03□□□□□ -2.24
RPA1P27694 MIR568-201ENST00000385036 95 ntBASIC1.03□□□□□ -2.24
RPA1P27694 MIR520G-201ENST00000385064 90 ntBASIC1.03□□□□□ -2.24
RPA1P27694 MTCO2P33-201ENST00000402100 465 ntBASIC1.03□□□□□ -2.24
RPA1P27694 RNU6-383P-201ENST00000410864 94 ntBASIC1.03□□□□□ -2.24
RPA1P27694 MLLT10P1-201ENST00000418346 262 ntBASIC1.03□□□□□ -2.24
RPA1P27694 AC245047.7-201ENST00000440265 293 ntBASIC1.03□□□□□ -2.24
RPA1P27694 SNORA31.2-201ENST00000516019 134 ntBASIC1.03□□□□□ -2.24
RPA1P27694 SNORA70.12-201ENST00000516084 153 ntBASIC1.03□□□□□ -2.24
RPA1P27694 AP003357.1-201ENST00000604497 148 ntBASIC1.03□□□□□ -2.24
RPA1P27694 AL008718.3-201ENST00000610217 321 ntBASIC1.03□□□□□ -2.24
RPA1P27694 MIR8070-201ENST00000616510 88 ntBASIC1.03□□□□□ -2.24
RPA1P27694 Y_RNA.363-201ENST00000365529 113 ntBASIC1.02□□□□□ -2.25
RPA1P27694 SNORA63.7-201ENST00000365579 123 ntBASIC1.02□□□□□ -2.25
RPA1P27694 Y_RNA.380-201ENST00000365663 111 ntBASIC1.02□□□□□ -2.25
RPA1P27694 RNU6-1323P-201ENST00000384025 107 ntBASIC1.02□□□□□ -2.25
RPA1P27694 RNU6-639P-201ENST00000384074 107 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms