Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 RNU6-310P-201ENST00000384655 107 ntBASIC0.45□□□□□ -2.34
NCK1P16333 Y_RNA.646-201ENST00000410980 101 ntBASIC0.45□□□□□ -2.34
NCK1P16333 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.45□□□□□ -2.34
NCK1P16333 AC099799.1-201ENST00000439809 192 ntBASIC0.45□□□□□ -2.34
NCK1P16333 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.45□□□□□ -2.34
NCK1P16333 RNU6-470P-201ENST00000515954 104 ntBASIC0.45□□□□□ -2.34
NCK1P16333 MIR4659A-201ENST00000580269 81 ntBASIC0.45□□□□□ -2.34
NCK1P16333 MIR4423-201ENST00000580922 80 ntBASIC0.45□□□□□ -2.34
NCK1P16333 MIR548AR-201ENST00000582191 57 ntBASIC0.45□□□□□ -2.34
NCK1P16333 RNU6-94P-201ENST00000607728 107 ntBASIC0.45□□□□□ -2.34
NCK1P16333 AL355073.2-201ENST00000612106 557 ntBASIC0.45□□□□□ -2.34
NCK1P16333 AC010487.4-201ENST00000637027 61 ntBASIC0.45□□□□□ -2.34
NCK1P16333 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
NCK1P16333 MIR1-1-201ENST00000362147 71 ntBASIC0.44□□□□□ -2.34
NCK1P16333 SNORD18A-201ENST00000363753 72 ntBASIC0.44□□□□□ -2.34
NCK1P16333 Y_RNA.203-201ENST00000364106 102 ntBASIC0.44□□□□□ -2.34
NCK1P16333 Y_RNA.205-201ENST00000364128 113 ntBASIC0.44□□□□□ -2.34
NCK1P16333 RNU6-580P-201ENST00000365159 107 ntBASIC0.44□□□□□ -2.34
NCK1P16333 RNU6-396P-201ENST00000365369 105 ntBASIC0.44□□□□□ -2.34
NCK1P16333 Y_RNA.376-201ENST00000365638 108 ntBASIC0.44□□□□□ -2.34
NCK1P16333 Y_RNA.462-201ENST00000384268 102 ntBASIC0.44□□□□□ -2.34
NCK1P16333 Y_RNA.537-201ENST00000384626 109 ntBASIC0.44□□□□□ -2.34
NCK1P16333 Y_RNA.570-201ENST00000384750 101 ntBASIC0.44□□□□□ -2.34
NCK1P16333 Y_RNA.605-201ENST00000410577 105 ntBASIC0.44□□□□□ -2.34
NCK1P16333 AC024067.1-201ENST00000426199 223 ntBASIC0.44□□□□□ -2.34
NCK1P16333 AC005534.2-201ENST00000431047 433 ntBASIC0.44□□□□□ -2.34
NCK1P16333 SNRPGP14-201ENST00000435400 219 ntBASIC0.44□□□□□ -2.34
NCK1P16333 AC005042.3-201ENST00000453230 174 ntBASIC0.44□□□□□ -2.34
NCK1P16333 Y_RNA.655-201ENST00000515919 96 ntBASIC0.44□□□□□ -2.34
NCK1P16333 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.44□□□□□ -2.34
NCK1P16333 MIR5188-201ENST00000583467 113 ntBASIC0.44□□□□□ -2.34
NCK1P16333 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
NCK1P16333 AC093783.1-201ENST00000612976 329 ntBASIC0.44□□□□□ -2.34
NCK1P16333 Pinc.1-201ENST00000616452 154 ntBASIC0.44□□□□□ -2.34
NCK1P16333 AC010205.1-201ENST00000616668 449 ntBASIC0.44□□□□□ -2.34
NCK1P16333 U2.1-201ENST00000618978 145 ntBASIC0.44□□□□□ -2.34
NCK1P16333 TPTEP1-208ENST00000636884 213 ntBASIC0.44□□□□□ -2.34
NCK1P16333 AL589743.1-201ENST00000551932 2712 ntBASIC0.44□□□□□ -2.34
NCK1P16333 Y_RNA.329-201ENST00000365209 107 ntBASIC0.43□□□□□ -2.34
NCK1P16333 RNU4-45P-201ENST00000365469 141 ntBASIC0.43□□□□□ -2.34
NCK1P16333 RNU6-945P-201ENST00000383947 107 ntBASIC0.43□□□□□ -2.34
NCK1P16333 RNU6-1237P-201ENST00000384777 107 ntBASIC0.43□□□□□ -2.34
NCK1P16333 MIR936-201ENST00000401264 98 ntBASIC0.43□□□□□ -2.34
NCK1P16333 RNU4-14P-201ENST00000410858 122 ntBASIC0.43□□□□□ -2.34
NCK1P16333 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.43□□□□□ -2.34
NCK1P16333 RNU6-1007P-201ENST00000516586 107 ntBASIC0.43□□□□□ -2.34
NCK1P16333 RNU6-1213P-201ENST00000517075 94 ntBASIC0.43□□□□□ -2.34
NCK1P16333 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.43□□□□□ -2.34
NCK1P16333 MIR1273G-201ENST00000577677 100 ntBASIC0.43□□□□□ -2.34
NCK1P16333 MIR2681-201ENST00000581814 105 ntBASIC0.43□□□□□ -2.34
NCK1P16333 POLR3GP1-201ENST00000594073 261 ntBASIC0.43□□□□□ -2.34
NCK1P16333 AC133104.2-201ENST00000615272 193 ntBASIC0.43□□□□□ -2.34
NCK1P16333 AC138305.3-201ENST00000624988 240 ntBASIC0.43□□□□□ -2.34
NCK1P16333 RNU6-490P-201ENST00000362985 107 ntBASIC0.42□□□□□ -2.34
NCK1P16333 Y_RNA.341-201ENST00000365341 102 ntBASIC0.42□□□□□ -2.34
NCK1P16333 RNU6-855P-201ENST00000410395 104 ntBASIC0.42□□□□□ -2.34
NCK1P16333 RNU6-370P-201ENST00000411008 104 ntBASIC0.42□□□□□ -2.34
NCK1P16333 RNU6-177P-201ENST00000411257 104 ntBASIC0.42□□□□□ -2.34
NCK1P16333 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.42□□□□□ -2.34
NCK1P16333 RNA5SP436-201ENST00000516020 115 ntBASIC0.42□□□□□ -2.34
NCK1P16333 AC011195.1-201ENST00000578177 177 ntBASIC0.42□□□□□ -2.34
NCK1P16333 AC243829.3-201ENST00000622177 108 ntBASIC0.42□□□□□ -2.34
NCK1P16333 RNU6-654P-201ENST00000364373 107 ntBASIC0.41□□□□□ -2.34
NCK1P16333 SNORA1.2-201ENST00000365189 134 ntBASIC0.41□□□□□ -2.34
NCK1P16333 RNU6-890P-201ENST00000384121 107 ntBASIC0.41□□□□□ -2.34
NCK1P16333 MIR628-201ENST00000385229 95 ntBASIC0.41□□□□□ -2.34
NCK1P16333 Y_RNA.599-201ENST00000410489 109 ntBASIC0.41□□□□□ -2.34
NCK1P16333 RNU6-966P-201ENST00000516479 104 ntBASIC0.41□□□□□ -2.34
NCK1P16333 AC127455.1-201ENST00000565496 145 ntBASIC0.41□□□□□ -2.34
NCK1P16333 JPX_2.1-201ENST00000614161 69 ntBASIC0.41□□□□□ -2.34
NCK1P16333 AC022306.2-201ENST00000617563 647 ntBASIC0.41□□□□□ -2.34
NCK1P16333 Y_RNA.148-201ENST00000363557 117 ntBASIC0.4□□□□□ -2.35
NCK1P16333 RNU6-1175P-201ENST00000365200 107 ntBASIC0.4□□□□□ -2.35
NCK1P16333 SNORA50A-201ENST00000384225 134 ntBASIC0.4□□□□□ -2.35
NCK1P16333 SNORA2B-201ENST00000384583 137 ntBASIC0.4□□□□□ -2.35
NCK1P16333 SNORD28B-201ENST00000390993 75 ntBASIC0.4□□□□□ -2.35
NCK1P16333 U8.17-201ENST00000391292 132 ntBASIC0.4□□□□□ -2.35
NCK1P16333 AC091951.2-201ENST00000500762 203 ntBASIC0.4□□□□□ -2.35
NCK1P16333 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.4□□□□□ -2.35
NCK1P16333 RNU7-115P-201ENST00000516433 55 ntBASIC0.4□□□□□ -2.35
NCK1P16333 VN1R91P-201ENST00000594377 169 ntBASIC0.4□□□□□ -2.35
NCK1P16333 MIR924-201ENST00000638017 53 ntBASIC0.4□□□□□ -2.35
NCK1P16333 RNU6-674P-201ENST00000363831 107 ntBASIC0.39□□□□□ -2.35
NCK1P16333 RNU6-268P-201ENST00000364174 107 ntBASIC0.39□□□□□ -2.35
NCK1P16333 PDCL2P1-201ENST00000419302 352 ntBASIC0.39□□□□□ -2.35
NCK1P16333 AC114737.2-201ENST00000421583 173 ntBASIC0.39□□□□□ -2.35
NCK1P16333 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.39□□□□□ -2.35
NCK1P16333 Y_RNA.653-201ENST00000459091 95 ntBASIC0.39□□□□□ -2.35
NCK1P16333 RNU6-496P-201ENST00000516145 99 ntBASIC0.39□□□□□ -2.35
NCK1P16333 RNU6-229P-201ENST00000516614 102 ntBASIC0.39□□□□□ -2.35
NCK1P16333 AC024405.2-202ENST00000532731 184 ntBASIC0.39□□□□□ -2.35
NCK1P16333 AC008507.4-201ENST00000585464 127 ntBASIC0.39□□□□□ -2.35
NCK1P16333 AC006441.5-201ENST00000612680 209 ntBASIC0.39□□□□□ -2.35
NCK1P16333 U6.92-201ENST00000636464 89 ntBASIC0.39□□□□□ -2.35
NCK1P16333 AC090625.1-201ENST00000357130 210 ntBASIC0.38□□□□□ -2.35
NCK1P16333 AC098934.3-201ENST00000430450 190 ntBASIC0.38□□□□□ -2.35
NCK1P16333 AC092628.1-201ENST00000436250 252 ntBASIC0.38□□□□□ -2.35
NCK1P16333 RNU2-13P-201ENST00000515909 113 ntBASIC0.38□□□□□ -2.35
NCK1P16333 SCARNA8-201ENST00000515924 131 ntBASIC0.38□□□□□ -2.35
NCK1P16333 RNU4-57P-201ENST00000515980 135 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms