Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RNU6-888P-201ENST00000363010 101 ntBASIC2.44□□□□□ -2.02
COL6A2P12110 Y_RNA.120-201ENST00000363304 110 ntBASIC2.44□□□□□ -2.02
COL6A2P12110 MIR624-201ENST00000385217 97 ntBASIC2.44□□□□□ -2.02
COL6A2P12110 RNU2-52P-201ENST00000410680 190 ntBASIC2.44□□□□□ -2.02
COL6A2P12110 RNA5SP184-201ENST00000411071 108 ntBASIC2.44□□□□□ -2.02
COL6A2P12110 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.44□□□□□ -2.02
COL6A2P12110 RNU6-313P-201ENST00000516317 112 ntBASIC2.44□□□□□ -2.02
COL6A2P12110 RNU6-971P-201ENST00000516920 106 ntBASIC2.44□□□□□ -2.02
COL6A2P12110 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.44□□□□□ -2.02
COL6A2P12110 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
COL6A2P12110 AC245060.5-201ENST00000610778 3293 ntBASIC2.43□□□□□ -2.02
COL6A2P12110 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
COL6A2P12110 Y_RNA.218-201ENST00000364218 104 ntBASIC2.43□□□□□ -2.02
COL6A2P12110 RNU6-1292P-201ENST00000383856 107 ntBASIC2.43□□□□□ -2.02
COL6A2P12110 RNU6-1336P-201ENST00000383886 109 ntBASIC2.43□□□□□ -2.02
COL6A2P12110 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
COL6A2P12110 RNU6-1154P-201ENST00000391001 104 ntBASIC2.43□□□□□ -2.02
COL6A2P12110 RNA5SP109-201ENST00000391010 116 ntBASIC2.43□□□□□ -2.02
COL6A2P12110 MLLT10P1-201ENST00000418346 262 ntBASIC2.43□□□□□ -2.02
COL6A2P12110 HMGN2P3-201ENST00000433603 273 ntBASIC2.43□□□□□ -2.02
COL6A2P12110 HMGN2P5-201ENST00000436882 273 ntBASIC2.43□□□□□ -2.02
COL6A2P12110 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.43□□□□□ -2.02
COL6A2P12110 MIR6895-201ENST00000613497 78 ntBASIC2.43□□□□□ -2.02
COL6A2P12110 AL365222.1-201ENST00000614661 98 ntBASIC2.43□□□□□ -2.02
COL6A2P12110 MIR8054-201ENST00000620877 86 ntBASIC2.43□□□□□ -2.02
COL6A2P12110 AC016717.2-201ENST00000609089 5141 ntBASIC2.42□□□□□ -2.02
COL6A2P12110 Y_RNA.71-201ENST00000362892 104 ntBASIC2.42□□□□□ -2.02
COL6A2P12110 Y_RNA.127-201ENST00000363386 109 ntBASIC2.42□□□□□ -2.02
COL6A2P12110 SNORA63D-201ENST00000364359 132 ntBASIC2.42□□□□□ -2.02
COL6A2P12110 RNU6-80P-201ENST00000384195 107 ntBASIC2.42□□□□□ -2.02
COL6A2P12110 SNORD61-201ENST00000384252 73 ntBASIC2.42□□□□□ -2.02
COL6A2P12110 SNORA22C-201ENST00000384614 134 ntBASIC2.42□□□□□ -2.02
COL6A2P12110 RNU6-440P-201ENST00000390882 105 ntBASIC2.42□□□□□ -2.02
COL6A2P12110 RNA5SP127-201ENST00000411051 133 ntBASIC2.42□□□□□ -2.02
COL6A2P12110 CYCSP49-201ENST00000420810 319 ntBASIC2.42□□□□□ -2.02
COL6A2P12110 SNORD109B-201ENST00000458961 67 ntBASIC2.42□□□□□ -2.02
COL6A2P12110 SNORD109A-201ENST00000459128 67 ntBASIC2.42□□□□□ -2.02
COL6A2P12110 MIR5094-201ENST00000578766 85 ntBASIC2.42□□□□□ -2.02
COL6A2P12110 SNORD14A-201ENST00000606526 91 ntBASIC2.42□□□□□ -2.02
COL6A2P12110 AC067747.1-201ENST00000608026 250 ntBASIC2.42□□□□□ -2.02
COL6A2P12110 AC006441.5-201ENST00000612680 209 ntBASIC2.42□□□□□ -2.02
COL6A2P12110 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL6A2P12110 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL6A2P12110 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL6A2P12110 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
COL6A2P12110 MIR21-201ENST00000362134 72 ntBASIC2.41□□□□□ -2.02
COL6A2P12110 SNORD68-201ENST00000363214 84 ntBASIC2.41□□□□□ -2.02
COL6A2P12110 Y_RNA.265-201ENST00000364677 108 ntBASIC2.41□□□□□ -2.02
COL6A2P12110 RNU6-915P-201ENST00000364943 103 ntBASIC2.41□□□□□ -2.02
COL6A2P12110 SNORD50B-201ENST00000364995 70 ntBASIC2.41□□□□□ -2.02
COL6A2P12110 MIR597-201ENST00000384968 97 ntBASIC2.41□□□□□ -2.02
COL6A2P12110 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
COL6A2P12110 SNORA48.1-201ENST00000390879 135 ntBASIC2.41□□□□□ -2.02
COL6A2P12110 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.41□□□□□ -2.02
COL6A2P12110 SNRPGP13-201ENST00000442212 177 ntBASIC2.41□□□□□ -2.02
COL6A2P12110 RNU6-1211P-201ENST00000459179 105 ntBASIC2.41□□□□□ -2.02
COL6A2P12110 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.41□□□□□ -2.02
COL6A2P12110 SNORA28-201ENST00000606769 126 ntBASIC2.41□□□□□ -2.02
COL6A2P12110 AC011603.4-201ENST00000611325 277 ntBASIC2.41□□□□□ -2.02
COL6A2P12110 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
COL6A2P12110 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.41□□□□□ -2.02
COL6A2P12110 AC005336.3-201ENST00000623833 2679 ntBASIC2.4□□□□□ -2.02
COL6A2P12110 SNORD114-30-201ENST00000364448 72 ntBASIC2.4□□□□□ -2.03
COL6A2P12110 RNA5SP205-201ENST00000364653 136 ntBASIC2.4□□□□□ -2.03
COL6A2P12110 snoU2-30.1-201ENST00000365012 70 ntBASIC2.4□□□□□ -2.03
COL6A2P12110 Y_RNA.336-201ENST00000365307 109 ntBASIC2.4□□□□□ -2.03
COL6A2P12110 SNORD116-14-201ENST00000383894 92 ntBASIC2.4□□□□□ -2.03
COL6A2P12110 SNORD116-17-201ENST00000383929 92 ntBASIC2.4□□□□□ -2.03
COL6A2P12110 SNORD116-15-201ENST00000384445 92 ntBASIC2.4□□□□□ -2.03
COL6A2P12110 SNORD116-19-201ENST00000384729 92 ntBASIC2.4□□□□□ -2.03
COL6A2P12110 RNA5SP508-201ENST00000411327 119 ntBASIC2.4□□□□□ -2.03
COL6A2P12110 RNA5SP270-201ENST00000411361 118 ntBASIC2.4□□□□□ -2.03
COL6A2P12110 SNRPGP14-201ENST00000435400 219 ntBASIC2.4□□□□□ -2.03
COL6A2P12110 Y_RNA.666-201ENST00000516187 112 ntBASIC2.4□□□□□ -2.03
COL6A2P12110 SNORA18.4-201ENST00000516440 124 ntBASIC2.4□□□□□ -2.03
COL6A2P12110 SUB1P4-201ENST00000566062 339 ntBASIC2.4□□□□□ -2.03
COL6A2P12110 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
COL6A2P12110 AC062016.1-201ENST00000355719 319 ntBASIC2.39□□□□□ -2.03
COL6A2P12110 RNU4-82P-201ENST00000362443 140 ntBASIC2.39□□□□□ -2.03
COL6A2P12110 RNU6-442P-201ENST00000383968 104 ntBASIC2.39□□□□□ -2.03
COL6A2P12110 SNORA1-201ENST00000384107 130 ntBASIC2.39□□□□□ -2.03
COL6A2P12110 RNU6-950P-201ENST00000384651 107 ntBASIC2.39□□□□□ -2.03
COL6A2P12110 MIR196B-201ENST00000384852 84 ntBASIC2.39□□□□□ -2.03
COL6A2P12110 MIR548A2-201ENST00000384956 97 ntBASIC2.39□□□□□ -2.03
COL6A2P12110 MIR891A-201ENST00000401237 79 ntBASIC2.39□□□□□ -2.03
COL6A2P12110 AL359511.1-201ENST00000402970 211 ntBASIC2.39□□□□□ -2.03
COL6A2P12110 MIR1261-201ENST00000408659 82 ntBASIC2.39□□□□□ -2.03
COL6A2P12110 AL513328.1-201ENST00000446460 224 ntBASIC2.39□□□□□ -2.03
COL6A2P12110 AC079804.2-201ENST00000490376 200 ntBASIC2.39□□□□□ -2.03
COL6A2P12110 RNU4-57P-201ENST00000515980 135 ntBASIC2.39□□□□□ -2.03
COL6A2P12110 SNORA31.10-201ENST00000516482 106 ntBASIC2.39□□□□□ -2.03
COL6A2P12110 AC078899.2-201ENST00000595282 212 ntBASIC2.39□□□□□ -2.03
COL6A2P12110 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
COL6A2P12110 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
COL6A2P12110 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
COL6A2P12110 RNU6-1084P-201ENST00000362498 107 ntBASIC2.38□□□□□ -2.03
COL6A2P12110 SNORD14E-201ENST00000364009 85 ntBASIC2.38□□□□□ -2.03
COL6A2P12110 SNORA3A-201ENST00000364113 130 ntBASIC2.38□□□□□ -2.03
COL6A2P12110 AL603914.1-201ENST00000401964 204 ntBASIC2.38□□□□□ -2.03
COL6A2P12110 RN7SKP200-201ENST00000410564 320 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms