Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
RARAP10276 U8.9-201ENST00000365667 134 ntBASIC3.06□□□□□ -1.92
RARAP10276 SNORA80E-201ENST00000384744 137 ntBASIC3.06□□□□□ -1.92
RARAP10276 MIR590-201ENST00000385008 97 ntBASIC3.06□□□□□ -1.92
RARAP10276 SNORD88.1-201ENST00000408684 91 ntBASIC3.06□□□□□ -1.92
RARAP10276 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.06□□□□□ -1.92
RARAP10276 AC107083.1-201ENST00000439643 279 ntBASIC3.06□□□□□ -1.92
RARAP10276 AL606517.2-201ENST00000442855 241 ntBASIC3.06□□□□□ -1.92
RARAP10276 RN7SL297P-201ENST00000483161 293 ntBASIC3.06□□□□□ -1.92
RARAP10276 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.06□□□□□ -1.92
RARAP10276 FAM35CP-201ENST00000554755 2470 ntBASIC3.06□□□□□ -1.92
RARAP10276 MIR3616-201ENST00000584070 92 ntBASIC3.06□□□□□ -1.92
RARAP10276 AC108206.1-201ENST00000570186 4159 ntBASIC3.06□□□□□ -1.92
RARAP10276 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.05□□□□□ -1.92
RARAP10276 Y_RNA.344-201ENST00000365381 112 ntBASIC3.05□□□□□ -1.92
RARAP10276 Y_RNA.558-201ENST00000384685 113 ntBASIC3.05□□□□□ -1.92
RARAP10276 RNU6-1104P-201ENST00000384723 104 ntBASIC3.05□□□□□ -1.92
RARAP10276 RNA5SP482-201ENST00000391269 118 ntBASIC3.05□□□□□ -1.92
RARAP10276 MIR887-201ENST00000401258 79 ntBASIC3.05□□□□□ -1.92
RARAP10276 SNORA19.1-201ENST00000410656 129 ntBASIC3.05□□□□□ -1.92
RARAP10276 AC245047.3-201ENST00000429428 127 ntBASIC3.05□□□□□ -1.92
RARAP10276 AC006483.1-201ENST00000487308 313 ntBASIC3.05□□□□□ -1.92
RARAP10276 RNU6-970P-201ENST00000516312 107 ntBASIC3.05□□□□□ -1.92
RARAP10276 RNU6-109P-201ENST00000516364 107 ntBASIC3.05□□□□□ -1.92
RARAP10276 RNU6-184P-201ENST00000516514 107 ntBASIC3.05□□□□□ -1.92
RARAP10276 AP003484.1-201ENST00000530974 250 ntBASIC3.05□□□□□ -1.92
RARAP10276 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
RARAP10276 AC002984.1-201ENST00000591692 448 ntBASIC3.05□□□□□ -1.92
RARAP10276 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.05□□□□□ -1.92
RARAP10276 MIR8057-201ENST00000620957 69 ntBASIC3.05□□□□□ -1.92
RARAP10276 MIR3651-201ENST00000630427 90 ntBASIC3.05□□□□□ -1.92
RARAP10276 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RARAP10276 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RARAP10276 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
RARAP10276 RNA5SP493-201ENST00000364115 91 ntBASIC3.04□□□□□ -1.92
RARAP10276 Y_RNA.351-201ENST00000365436 96 ntBASIC3.04□□□□□ -1.92
RARAP10276 MIR488-201ENST00000365739 83 ntBASIC3.04□□□□□ -1.92
RARAP10276 MIR548D2-201ENST00000384955 97 ntBASIC3.04□□□□□ -1.92
RARAP10276 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.04□□□□□ -1.92
RARAP10276 AC009238.1-201ENST00000442165 424 ntBASIC3.04□□□□□ -1.92
RARAP10276 AC009237.6-201ENST00000446969 424 ntBASIC3.04□□□□□ -1.92
RARAP10276 SNORA18.7-201ENST00000516910 131 ntBASIC3.04□□□□□ -1.92
RARAP10276 AC022523.2-201ENST00000561045 150 ntBASIC3.04□□□□□ -1.92
RARAP10276 MIR3169-201ENST00000578032 83 ntBASIC3.04□□□□□ -1.92
RARAP10276 AC015726.2-201ENST00000620112 122 ntBASIC3.04□□□□□ -1.92
RARAP10276 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.04□□□□□ -1.92
RARAP10276 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RARAP10276 MIR422A-201ENST00000362286 90 ntBASIC3.03□□□□□ -1.92
RARAP10276 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.03□□□□□ -1.92
RARAP10276 RNY4P29-201ENST00000410801 97 ntBASIC3.03□□□□□ -1.92
RARAP10276 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.03□□□□□ -1.92
RARAP10276 AC087499.4-201ENST00000448505 178 ntBASIC3.03□□□□□ -1.92
RARAP10276 RNU6-762P-201ENST00000517107 102 ntBASIC3.03□□□□□ -1.92
RARAP10276 AC084364.2-201ENST00000546924 395 ntBASIC3.03□□□□□ -1.92
RARAP10276 MIR4305-201ENST00000583252 102 ntBASIC3.03□□□□□ -1.92
RARAP10276 Y_RNA.818-201ENST00000618813 71 ntBASIC3.03□□□□□ -1.92
RARAP10276 AC091932.4-201ENST00000623386 200 ntBASIC3.03□□□□□ -1.92
RARAP10276 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RARAP10276 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
RARAP10276 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RARAP10276 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.02□□□□□ -1.93
RARAP10276 Y_RNA.78-201ENST00000362970 110 ntBASIC3.02□□□□□ -1.93
RARAP10276 Y_RNA.265-201ENST00000364677 108 ntBASIC3.02□□□□□ -1.93
RARAP10276 SNORA26.2-201ENST00000390922 122 ntBASIC3.02□□□□□ -1.93
RARAP10276 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.02□□□□□ -1.93
RARAP10276 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.02□□□□□ -1.93
RARAP10276 RNU7-80P-201ENST00000459562 61 ntBASIC3.02□□□□□ -1.93
RARAP10276 RNU7-28P-201ENST00000516759 62 ntBASIC3.02□□□□□ -1.93
RARAP10276 MIR3163-201ENST00000581592 73 ntBASIC3.02□□□□□ -1.93
RARAP10276 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.02□□□□□ -1.93
RARAP10276 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
RARAP10276 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RARAP10276 SNORA9.2-201ENST00000365361 133 ntBASIC3.01□□□□□ -1.93
RARAP10276 Y_RNA.388-201ENST00000383919 113 ntBASIC3.01□□□□□ -1.93
RARAP10276 RNA5SP109-201ENST00000391010 116 ntBASIC3.01□□□□□ -1.93
RARAP10276 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.01□□□□□ -1.93
RARAP10276 AC104332.2-201ENST00000429959 156 ntBASIC3.01□□□□□ -1.93
RARAP10276 RNU2-35P-201ENST00000516446 142 ntBASIC3.01□□□□□ -1.93
RARAP10276 RNU6-158P-201ENST00000517104 100 ntBASIC3.01□□□□□ -1.93
RARAP10276 MIR3683-201ENST00000580847 82 ntBASIC3.01□□□□□ -1.93
RARAP10276 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.01□□□□□ -1.93
RARAP10276 U4atac.1-201ENST00000618345 95 ntBASIC3.01□□□□□ -1.93
RARAP10276 AC022513.1-201ENST00000624512 117 ntBASIC3.01□□□□□ -1.93
RARAP10276 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
RARAP10276 AL596211.1-201ENST00000569873 2277 ntBASIC3.01□□□□□ -1.93
RARAP10276 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.01□□□□□ -1.93
RARAP10276 ICE2P2-201ENST00000483823 2787 ntBASIC3□□□□□ -1.93
RARAP10276 AC245060.5-201ENST00000610778 3293 ntBASIC3□□□□□ -1.93
RARAP10276 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3□□□□□ -1.93
RARAP10276 RNU6-23P-201ENST00000363283 107 ntBASIC3□□□□□ -1.93
RARAP10276 Y_RNA.454-201ENST00000384224 113 ntBASIC3□□□□□ -1.93
RARAP10276 AL627390.1-201ENST00000396055 340 ntBASIC3□□□□□ -1.93
RARAP10276 MIR1261-201ENST00000408659 82 ntBASIC3□□□□□ -1.93
RARAP10276 RNU6-904P-201ENST00000516206 101 ntBASIC3□□□□□ -1.93
RARAP10276 AC141557.1-201ENST00000540982 400 ntBASIC3□□□□□ -1.93
RARAP10276 MIR4778-201ENST00000577635 80 ntBASIC3□□□□□ -1.93
RARAP10276 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3□□□□□ -1.93
RARAP10276 HSPE1P19-201ENST00000603327 295 ntBASIC3□□□□□ -1.93
RARAP10276 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3□□□□□ -1.93
RARAP10276 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms