Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
SNRPA1P09661 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
SNRPA1P09661 RNU1-58P-201ENST00000362413 163 ntBASIC2.31□□□□□ -2.04
SNRPA1P09661 RNU6-1209P-201ENST00000363655 107 ntBASIC2.31□□□□□ -2.04
SNRPA1P09661 Y_RNA.796-201ENST00000364268 102 ntBASIC2.31□□□□□ -2.04
SNRPA1P09661 Y_RNA.799-201ENST00000364992 102 ntBASIC2.31□□□□□ -2.04
SNRPA1P09661 MIR597-201ENST00000384968 97 ntBASIC2.31□□□□□ -2.04
SNRPA1P09661 AC107027.2-201ENST00000512197 115 ntBASIC2.31□□□□□ -2.04
SNRPA1P09661 SNORA31.25-201ENST00000517242 134 ntBASIC2.31□□□□□ -2.04
SNRPA1P09661 MIR4255-201ENST00000579351 72 ntBASIC2.31□□□□□ -2.04
SNRPA1P09661 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.31□□□□□ -2.04
SNRPA1P09661 MTND1P7-201ENST00000632801 297 ntBASIC2.31□□□□□ -2.04
SNRPA1P09661 SNORD45.3-201ENST00000363836 72 ntBASIC2.3□□□□□ -2.04
SNRPA1P09661 RNU6-151P-201ENST00000364158 107 ntBASIC2.3□□□□□ -2.04
SNRPA1P09661 RNU6-643P-201ENST00000384018 107 ntBASIC2.3□□□□□ -2.04
SNRPA1P09661 MIR29C-201ENST00000385231 88 ntBASIC2.3□□□□□ -2.04
SNRPA1P09661 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.3□□□□□ -2.04
SNRPA1P09661 AC108667.1-201ENST00000428618 249 ntBASIC2.3□□□□□ -2.04
SNRPA1P09661 AL392103.1-201ENST00000447000 198 ntBASIC2.3□□□□□ -2.04
SNRPA1P09661 SNRPGP8-201ENST00000454064 226 ntBASIC2.3□□□□□ -2.04
SNRPA1P09661 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.3□□□□□ -2.04
SNRPA1P09661 SNORD13-201ENST00000459299 104 ntBASIC2.3□□□□□ -2.04
SNRPA1P09661 RPS26P45-201ENST00000471748 340 ntBASIC2.3□□□□□ -2.04
SNRPA1P09661 SNORD116-25-201ENST00000516517 92 ntBASIC2.3□□□□□ -2.04
SNRPA1P09661 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.3□□□□□ -2.04
SNRPA1P09661 MIR3658-201ENST00000636291 56 ntBASIC2.3□□□□□ -2.04
SNRPA1P09661 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
SNRPA1P09661 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SNRPA1P09661 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
SNRPA1P09661 RNY3P5-201ENST00000384127 102 ntBASIC2.29□□□□□ -2.04
SNRPA1P09661 MIR515-2-201ENST00000384883 83 ntBASIC2.29□□□□□ -2.04
SNRPA1P09661 MIR515-1-201ENST00000384884 83 ntBASIC2.29□□□□□ -2.04
SNRPA1P09661 SNORD11-201ENST00000459124 84 ntBASIC2.29□□□□□ -2.04
SNRPA1P09661 SNORA31.11-201ENST00000516528 139 ntBASIC2.29□□□□□ -2.04
SNRPA1P09661 RNA5SP137-201ENST00000516833 135 ntBASIC2.29□□□□□ -2.04
SNRPA1P09661 MIR4529-201ENST00000578110 78 ntBASIC2.29□□□□□ -2.04
SNRPA1P09661 MIR2681-201ENST00000581814 105 ntBASIC2.29□□□□□ -2.04
SNRPA1P09661 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.29□□□□□ -2.04
SNRPA1P09661 JPX_2.1-201ENST00000614161 69 ntBASIC2.29□□□□□ -2.04
SNRPA1P09661 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.28□□□□□ -2.04
SNRPA1P09661 AL596028.1-201ENST00000326971 197 ntBASIC2.28□□□□□ -2.04
SNRPA1P09661 SNORA16.1-201ENST00000364597 132 ntBASIC2.28□□□□□ -2.04
SNRPA1P09661 RNU11-3P-201ENST00000391111 133 ntBASIC2.28□□□□□ -2.04
SNRPA1P09661 RNU11-5P-201ENST00000391216 129 ntBASIC2.28□□□□□ -2.04
SNRPA1P09661 AL606517.2-201ENST00000442855 241 ntBASIC2.28□□□□□ -2.04
SNRPA1P09661 RNU6-341P-201ENST00000516973 96 ntBASIC2.28□□□□□ -2.04
SNRPA1P09661 RNU2-19P-201ENST00000517288 84 ntBASIC2.28□□□□□ -2.04
SNRPA1P09661 AC024995.1-201ENST00000523014 93 ntBASIC2.28□□□□□ -2.04
SNRPA1P09661 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.28□□□□□ -2.04
SNRPA1P09661 MIR3910-1-201ENST00000580936 111 ntBASIC2.28□□□□□ -2.04
SNRPA1P09661 uc_338.4-201ENST00000616635 176 ntBASIC2.28□□□□□ -2.04
SNRPA1P09661 Y_RNA.778-201ENST00000620203 90 ntBASIC2.28□□□□□ -2.04
SNRPA1P09661 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SNRPA1P09661 SNORA1B-201ENST00000362535 133 ntBASIC2.27□□□□□ -2.05
SNRPA1P09661 Y_RNA.253-201ENST00000364562 112 ntBASIC2.27□□□□□ -2.05
SNRPA1P09661 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SNRPA1P09661 MIR1283-2-201ENST00000408621 87 ntBASIC2.27□□□□□ -2.05
SNRPA1P09661 RNA5SP338-201ENST00000410495 85 ntBASIC2.27□□□□□ -2.05
SNRPA1P09661 AC055731.1-201ENST00000474387 401 ntBASIC2.27□□□□□ -2.05
SNRPA1P09661 RNU7-121P-201ENST00000516604 62 ntBASIC2.27□□□□□ -2.05
SNRPA1P09661 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.27□□□□□ -2.05
SNRPA1P09661 AC005786.1-201ENST00000588553 154 ntBASIC2.27□□□□□ -2.05
SNRPA1P09661 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.27□□□□□ -2.05
SNRPA1P09661 ZNF702P-202ENST00000434269 1966 ntBASIC2.27□□□□□ -2.05
SNRPA1P09661 RNU6-457P-201ENST00000363999 107 ntBASIC2.26□□□□□ -2.05
SNRPA1P09661 Y_RNA.215-201ENST00000364204 112 ntBASIC2.26□□□□□ -2.05
SNRPA1P09661 Y_RNA.337-201ENST00000365312 102 ntBASIC2.26□□□□□ -2.05
SNRPA1P09661 Y_RNA.400-201ENST00000383963 111 ntBASIC2.26□□□□□ -2.05
SNRPA1P09661 SNORA12.1-201ENST00000390873 148 ntBASIC2.26□□□□□ -2.05
SNRPA1P09661 HMGN1P7-201ENST00000491722 313 ntBASIC2.26□□□□□ -2.05
SNRPA1P09661 RNU6-406P-201ENST00000516470 107 ntBASIC2.26□□□□□ -2.05
SNRPA1P09661 MIR5094-201ENST00000578766 85 ntBASIC2.26□□□□□ -2.05
SNRPA1P09661 AC022217.4-201ENST00000604389 163 ntBASIC2.26□□□□□ -2.05
SNRPA1P09661 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SNRPA1P09661 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
SNRPA1P09661 AL157777.2-201ENST00000258070 137 ntBASIC2.25□□□□□ -2.05
SNRPA1P09661 SNORA16B-201ENST00000364674 135 ntBASIC2.25□□□□□ -2.05
SNRPA1P09661 RNU4-11P-201ENST00000365287 132 ntBASIC2.25□□□□□ -2.05
SNRPA1P09661 RNU6-484P-201ENST00000384016 107 ntBASIC2.25□□□□□ -2.05
SNRPA1P09661 MIR562-201ENST00000384894 95 ntBASIC2.25□□□□□ -2.05
SNRPA1P09661 MIR518A2-201ENST00000384966 87 ntBASIC2.25□□□□□ -2.05
SNRPA1P09661 RNA5SP109-201ENST00000391010 116 ntBASIC2.25□□□□□ -2.05
SNRPA1P09661 RNU4-43P-201ENST00000410628 137 ntBASIC2.25□□□□□ -2.05
SNRPA1P09661 SNRPGP10-201ENST00000432323 225 ntBASIC2.25□□□□□ -2.05
SNRPA1P09661 AC023449.1-201ENST00000454464 154 ntBASIC2.25□□□□□ -2.05
SNRPA1P09661 RNU7-94P-201ENST00000459576 63 ntBASIC2.25□□□□□ -2.05
SNRPA1P09661 RPS27P21-201ENST00000486977 252 ntBASIC2.25□□□□□ -2.05
SNRPA1P09661 NDUFA4P2-201ENST00000489989 244 ntBASIC2.25□□□□□ -2.05
SNRPA1P09661 RNA5SP272-201ENST00000516095 111 ntBASIC2.25□□□□□ -2.05
SNRPA1P09661 RNU6-789P-201ENST00000517105 102 ntBASIC2.25□□□□□ -2.05
SNRPA1P09661 DNAJC19P2-201ENST00000593340 302 ntBASIC2.25□□□□□ -2.05
SNRPA1P09661 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
SNRPA1P09661 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
SNRPA1P09661 Y_RNA.432-201ENST00000384087 111 ntBASIC2.24□□□□□ -2.05
SNRPA1P09661 Y_RNA.488-201ENST00000384403 102 ntBASIC2.24□□□□□ -2.05
SNRPA1P09661 Y_RNA.521-201ENST00000384560 114 ntBASIC2.24□□□□□ -2.05
SNRPA1P09661 MIR17-201ENST00000385012 84 ntBASIC2.24□□□□□ -2.05
SNRPA1P09661 MIR613-201ENST00000385248 95 ntBASIC2.24□□□□□ -2.05
SNRPA1P09661 RNU6-131P-201ENST00000391144 107 ntBASIC2.24□□□□□ -2.05
SNRPA1P09661 HMGN2P39-201ENST00000398005 273 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 220.8 ms