Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
HOXC6P09630 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
HOXC6P09630 RNU6-1130P-201ENST00000365434 107 ntBASIC1.9□□□□□ -2.11
HOXC6P09630 Y_RNA.506-201ENST00000384494 102 ntBASIC1.9□□□□□ -2.11
HOXC6P09630 RNU6-125P-201ENST00000384505 107 ntBASIC1.9□□□□□ -2.11
HOXC6P09630 RNU6-578P-201ENST00000390980 103 ntBASIC1.9□□□□□ -2.11
HOXC6P09630 AL606845.1-201ENST00000404881 255 ntBASIC1.9□□□□□ -2.11
HOXC6P09630 AC099677.2-201ENST00000436385 175 ntBASIC1.9□□□□□ -2.11
HOXC6P09630 AC233266.1-201ENST00000454518 96 ntBASIC1.9□□□□□ -2.11
HOXC6P09630 RNU6-437P-201ENST00000459408 95 ntBASIC1.9□□□□□ -2.11
HOXC6P09630 RN7SKP164-201ENST00000516138 266 ntBASIC1.9□□□□□ -2.11
HOXC6P09630 RNU6-1146P-201ENST00000516282 102 ntBASIC1.9□□□□□ -2.11
HOXC6P09630 RNU6-1212P-201ENST00000517023 104 ntBASIC1.9□□□□□ -2.11
HOXC6P09630 AC011604.1-201ENST00000545978 196 ntBASIC1.9□□□□□ -2.11
HOXC6P09630 AC078899.2-201ENST00000595282 212 ntBASIC1.9□□□□□ -2.11
HOXC6P09630 AC242852.1-201ENST00000612151 96 ntBASIC1.9□□□□□ -2.11
HOXC6P09630 AC244015.1-201ENST00000622301 99 ntBASIC1.9□□□□□ -2.11
HOXC6P09630 AC022513.1-201ENST00000624512 117 ntBASIC1.9□□□□□ -2.11
HOXC6P09630 Y_RNA.75-201ENST00000362927 97 ntBASIC1.89□□□□□ -2.11
HOXC6P09630 RNU6-23P-201ENST00000363283 107 ntBASIC1.89□□□□□ -2.11
HOXC6P09630 Y_RNA.121-201ENST00000363309 113 ntBASIC1.89□□□□□ -2.11
HOXC6P09630 Y_RNA.796-201ENST00000364268 102 ntBASIC1.89□□□□□ -2.11
HOXC6P09630 Y_RNA.799-201ENST00000364992 102 ntBASIC1.89□□□□□ -2.11
HOXC6P09630 RNU6-1080P-201ENST00000383982 107 ntBASIC1.89□□□□□ -2.11
HOXC6P09630 RNU4-52P-201ENST00000384209 138 ntBASIC1.89□□□□□ -2.11
HOXC6P09630 MIR616-201ENST00000385293 97 ntBASIC1.89□□□□□ -2.11
HOXC6P09630 AL356379.1-201ENST00000414105 126 ntBASIC1.89□□□□□ -2.11
HOXC6P09630 AL353689.1-201ENST00000438895 199 ntBASIC1.89□□□□□ -2.11
HOXC6P09630 RNU1-131P-201ENST00000458943 161 ntBASIC1.89□□□□□ -2.11
HOXC6P09630 RNA5SP233-201ENST00000459153 113 ntBASIC1.89□□□□□ -2.11
HOXC6P09630 RNU7-99P-201ENST00000516271 62 ntBASIC1.89□□□□□ -2.11
HOXC6P09630 RNU6-1291P-201ENST00000516591 104 ntBASIC1.89□□□□□ -2.11
HOXC6P09630 RNU7-116P-201ENST00000516940 62 ntBASIC1.89□□□□□ -2.11
HOXC6P09630 SNORA31.25-201ENST00000517242 134 ntBASIC1.89□□□□□ -2.11
HOXC6P09630 AL031274.2-201ENST00000599419 203 ntBASIC1.89□□□□□ -2.11
HOXC6P09630 RNU4-41P-201ENST00000364426 143 ntBASIC1.88□□□□□ -2.11
HOXC6P09630 RNU6-312P-201ENST00000364629 107 ntBASIC1.88□□□□□ -2.11
HOXC6P09630 Y_RNA.272-201ENST00000364696 102 ntBASIC1.88□□□□□ -2.11
HOXC6P09630 RNU6-275P-201ENST00000364910 107 ntBASIC1.88□□□□□ -2.11
HOXC6P09630 RNU6-392P-201ENST00000364926 101 ntBASIC1.88□□□□□ -2.11
HOXC6P09630 SNORA25.9-201ENST00000365087 128 ntBASIC1.88□□□□□ -2.11
HOXC6P09630 Y_RNA.441-201ENST00000384123 112 ntBASIC1.88□□□□□ -2.11
HOXC6P09630 SNORA72-201ENST00000384339 132 ntBASIC1.88□□□□□ -2.11
HOXC6P09630 Y_RNA.621-201ENST00000411065 96 ntBASIC1.88□□□□□ -2.11
HOXC6P09630 Y_RNA.622-201ENST00000411091 108 ntBASIC1.88□□□□□ -2.11
HOXC6P09630 AL163195.1-201ENST00000496941 348 ntBASIC1.88□□□□□ -2.11
HOXC6P09630 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.88□□□□□ -2.11
HOXC6P09630 RNU6-1096P-201ENST00000517089 102 ntBASIC1.88□□□□□ -2.11
HOXC6P09630 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.88□□□□□ -2.11
HOXC6P09630 AC026271.5-201ENST00000577873 130 ntBASIC1.88□□□□□ -2.11
HOXC6P09630 AC091178.2-201ENST00000584401 117 ntBASIC1.88□□□□□ -2.11
HOXC6P09630 AC007229.1-201ENST00000590455 412 ntBASIC1.88□□□□□ -2.11
HOXC6P09630 AL049861.1-201ENST00000603130 150 ntBASIC1.88□□□□□ -2.11
HOXC6P09630 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HOXC6P09630 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
HOXC6P09630 Y_RNA.267-201ENST00000364679 109 ntBASIC1.87□□□□□ -2.11
HOXC6P09630 SNORD48-201ENST00000364953 64 ntBASIC1.87□□□□□ -2.11
HOXC6P09630 RNU6-746P-201ENST00000384112 109 ntBASIC1.87□□□□□ -2.11
HOXC6P09630 Y_RNA.508-201ENST00000384502 114 ntBASIC1.87□□□□□ -2.11
HOXC6P09630 SNORA8-201ENST00000384574 139 ntBASIC1.87□□□□□ -2.11
HOXC6P09630 MIR597-201ENST00000384968 97 ntBASIC1.87□□□□□ -2.11
HOXC6P09630 RNA5SP323-201ENST00000391094 133 ntBASIC1.87□□□□□ -2.11
HOXC6P09630 Y_RNA.587-201ENST00000391210 103 ntBASIC1.87□□□□□ -2.11
HOXC6P09630 RNU2-40P-201ENST00000410833 196 ntBASIC1.87□□□□□ -2.11
HOXC6P09630 HMGN2P19-201ENST00000425149 265 ntBASIC1.87□□□□□ -2.11
HOXC6P09630 AC010154.1-201ENST00000425857 269 ntBASIC1.87□□□□□ -2.11
HOXC6P09630 AC245102.2-201ENST00000448956 180 ntBASIC1.87□□□□□ -2.11
HOXC6P09630 AL121914.1-201ENST00000450188 156 ntBASIC1.87□□□□□ -2.11
HOXC6P09630 RNU1-142P-201ENST00000516682 145 ntBASIC1.87□□□□□ -2.11
HOXC6P09630 AC109810.1-201ENST00000534066 224 ntBASIC1.87□□□□□ -2.11
HOXC6P09630 MIR4448-201ENST00000584360 86 ntBASIC1.87□□□□□ -2.11
HOXC6P09630 AL645939.4-201ENST00000604495 135 ntBASIC1.87□□□□□ -2.11
HOXC6P09630 AL359075.3-201ENST00000613288 217 ntBASIC1.87□□□□□ -2.11
HOXC6P09630 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.87□□□□□ -2.11
HOXC6P09630 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.87□□□□□ -2.11
HOXC6P09630 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.87□□□□□ -2.11
HOXC6P09630 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HOXC6P09630 RNU6-103P-201ENST00000363686 107 ntBASIC1.86□□□□□ -2.11
HOXC6P09630 RNU6-674P-201ENST00000363831 107 ntBASIC1.86□□□□□ -2.11
HOXC6P09630 Y_RNA.203-201ENST00000364106 102 ntBASIC1.86□□□□□ -2.11
HOXC6P09630 RNU6-60P-201ENST00000364792 103 ntBASIC1.86□□□□□ -2.11
HOXC6P09630 Y_RNA.355-201ENST00000365462 98 ntBASIC1.86□□□□□ -2.11
HOXC6P09630 RNU11-3P-201ENST00000391111 133 ntBASIC1.86□□□□□ -2.11
HOXC6P09630 RNU4-61P-201ENST00000411243 107 ntBASIC1.86□□□□□ -2.11
HOXC6P09630 AL606517.2-201ENST00000442855 241 ntBASIC1.86□□□□□ -2.11
HOXC6P09630 SNRPGP8-201ENST00000454064 226 ntBASIC1.86□□□□□ -2.11
HOXC6P09630 RPL23AP91-201ENST00000569211 455 ntBASIC1.86□□□□□ -2.11
HOXC6P09630 SNORD53B-201ENST00000577887 78 ntBASIC1.86□□□□□ -2.11
HOXC6P09630 MIR4529-201ENST00000578110 78 ntBASIC1.86□□□□□ -2.11
HOXC6P09630 AL353149.1-201ENST00000610667 244 ntBASIC1.86□□□□□ -2.11
HOXC6P09630 MIR6079-201ENST00000635807 62 ntBASIC1.86□□□□□ -2.11
HOXC6P09630 RNU1-58P-201ENST00000362413 163 ntBASIC1.85□□□□□ -2.11
HOXC6P09630 Y_RNA.23-201ENST00000362496 106 ntBASIC1.85□□□□□ -2.11
HOXC6P09630 RNU6-1209P-201ENST00000363655 107 ntBASIC1.85□□□□□ -2.11
HOXC6P09630 RNU4-84P-201ENST00000364200 139 ntBASIC1.85□□□□□ -2.11
HOXC6P09630 SNORA16B-201ENST00000364674 135 ntBASIC1.85□□□□□ -2.11
HOXC6P09630 Y_RNA.357-201ENST00000365487 109 ntBASIC1.85□□□□□ -2.11
HOXC6P09630 SNORD116-18-201ENST00000383961 92 ntBASIC1.85□□□□□ -2.11
HOXC6P09630 RNU6-1228P-201ENST00000391014 107 ntBASIC1.85□□□□□ -2.11
HOXC6P09630 HMGN2P39-201ENST00000398005 273 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms