Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SNORD38C-201ENST00000384381 69 ntBASIC-1.2□□□□□ -2.6
APOBP04114 Y_RNA.504-201ENST00000384481 104 ntBASIC-1.2□□□□□ -2.6
APOBP04114 AC244090.1-201ENST00000441884 93 ntBASIC-1.2□□□□□ -2.6
APOBP04114 Y_RNA.689-201ENST00000516589 107 ntBASIC-1.2□□□□□ -2.6
APOBP04114 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-1.2□□□□□ -2.6
APOBP04114 MIR4748-201ENST00000578076 82 ntBASIC-1.2□□□□□ -2.6
APOBP04114 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.2□□□□□ -2.6
APOBP04114 AL121655.1-201ENST00000605811 308 ntBASIC-1.2□□□□□ -2.6
APOBP04114 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.2□□□□□ -2.6
APOBP04114 AL354696.1-201ENST00000614652 497 ntBASIC-1.2□□□□□ -2.6
APOBP04114 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.2□□□□□ -2.6
APOBP04114 RNU6-169P-201ENST00000365336 107 ntBASIC-1.2□□□□□ -2.6
APOBP04114 RNU6-708P-201ENST00000384217 107 ntBASIC-1.2□□□□□ -2.6
APOBP04114 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.2□□□□□ -2.6
APOBP04114 RNU2-8P-201ENST00000410727 190 ntBASIC-1.2□□□□□ -2.6
APOBP04114 AC005776.1-201ENST00000603164 290 ntBASIC-1.2□□□□□ -2.6
APOBP04114 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.2□□□□□ -2.6
APOBP04114 RNU6-740P-201ENST00000364734 105 ntBASIC-1.2□□□□□ -2.6
APOBP04114 Y_RNA.302-201ENST00000364997 102 ntBASIC-1.2□□□□□ -2.6
APOBP04114 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.2□□□□□ -2.6
APOBP04114 SNORA24-201ENST00000384096 131 ntBASIC-1.2□□□□□ -2.6
APOBP04114 RNU4-55P-201ENST00000410731 137 ntBASIC-1.2□□□□□ -2.6
APOBP04114 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-1.2□□□□□ -2.6
APOBP04114 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.2□□□□□ -2.6
APOBP04114 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.2□□□□□ -2.6
APOBP04114 RNU6-973P-201ENST00000364690 107 ntBASIC-1.2□□□□□ -2.6
APOBP04114 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.2□□□□□ -2.6
APOBP04114 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.2□□□□□ -2.6
APOBP04114 AC022893.3-201ENST00000607665 437 ntBASIC-1.2□□□□□ -2.6
APOBP04114 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.21□□□□□ -2.6
APOBP04114 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.21□□□□□ -2.6
APOBP04114 RNY3P9-201ENST00000384727 106 ntBASIC-1.21□□□□□ -2.6
APOBP04114 SNAP23P1-201ENST00000433229 246 ntBASIC-1.21□□□□□ -2.6
APOBP04114 MIR5704-201ENST00000584029 77 ntBASIC-1.21□□□□□ -2.6
APOBP04114 AL391834.2-201ENST00000609982 546 ntBASIC-1.21□□□□□ -2.6
APOBP04114 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.21□□□□□ -2.6
APOBP04114 RNU6-128P-201ENST00000383976 107 ntBASIC-1.21□□□□□ -2.6
APOBP04114 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.21□□□□□ -2.6
APOBP04114 snoR1.1-201ENST00000628177 80 ntBASIC-1.21□□□□□ -2.6
APOBP04114 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.21□□□□□ -2.6
APOBP04114 MIR421-201ENST00000365696 85 ntBASIC-1.21□□□□□ -2.6
APOBP04114 SNRPGP14-201ENST00000435400 219 ntBASIC-1.21□□□□□ -2.6
APOBP04114 AC174048.1-201ENST00000603389 144 ntBASIC-1.21□□□□□ -2.6
APOBP04114 AL022154.1-201ENST00000604698 785 ntBASIC-1.21□□□□□ -2.6
APOBP04114 MIR6082-201ENST00000613604 109 ntBASIC-1.21□□□□□ -2.6
APOBP04114 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-1.21□□□□□ -2.6
APOBP04114 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.22□□□□□ -2.6
APOBP04114 RNU6-216P-201ENST00000363282 104 ntBASIC-1.22□□□□□ -2.6
APOBP04114 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.22□□□□□ -2.6
APOBP04114 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.22□□□□□ -2.6
APOBP04114 RNU2-62P-201ENST00000410868 191 ntBASIC-1.22□□□□□ -2.6
APOBP04114 MTCO2P11-201ENST00000431069 680 ntBASIC-1.22□□□□□ -2.6
APOBP04114 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-1.22□□□□□ -2.6
APOBP04114 SNRPGP7-201ENST00000469016 106 ntBASIC-1.22□□□□□ -2.6
APOBP04114 AC091133.4-201ENST00000511142 308 ntBASIC-1.22□□□□□ -2.6
APOBP04114 RNU6-885P-201ENST00000516607 104 ntBASIC-1.22□□□□□ -2.6
APOBP04114 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.22□□□□□ -2.6
APOBP04114 Y_RNA.547-201ENST00000384654 119 ntBASIC-1.22□□□□□ -2.6
APOBP04114 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.22□□□□□ -2.6
APOBP04114 MIR181A1-201ENST00000385026 110 ntBASIC-1.22□□□□□ -2.6
APOBP04114 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.22□□□□□ -2.6
APOBP04114 SNORA75B-201ENST00000384053 137 ntBASIC-1.22□□□□□ -2.6
APOBP04114 Y_RNA.481-201ENST00000384373 102 ntBASIC-1.22□□□□□ -2.6
APOBP04114 MIR570-201ENST00000384917 97 ntBASIC-1.22□□□□□ -2.6
APOBP04114 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.22□□□□□ -2.6
APOBP04114 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-1.22□□□□□ -2.6
APOBP04114 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.22□□□□□ -2.6
APOBP04114 MIR4491-201ENST00000581087 68 ntBASIC-1.22□□□□□ -2.6
APOBP04114 AC016252.1-201ENST00000609721 474 ntBASIC-1.22□□□□□ -2.6
APOBP04114 MRPS10P1-201ENST00000448483 130 ntBASIC-1.22□□□□□ -2.61
APOBP04114 MTND1P27-201ENST00000451117 902 ntBASIC-1.22□□□□□ -2.61
APOBP04114 U8.22-201ENST00000459141 133 ntBASIC-1.22□□□□□ -2.61
APOBP04114 AC021451.1-201ENST00000523498 1129 ntBASIC-1.22□□□□□ -2.61
APOBP04114 MIR30D-201ENST00000362283 70 ntBASIC-1.23□□□□□ -2.61
APOBP04114 RNU6-179P-201ENST00000363350 107 ntBASIC-1.23□□□□□ -2.61
APOBP04114 SNORD115-26-201ENST00000365067 82 ntBASIC-1.23□□□□□ -2.61
APOBP04114 RNU6-400P-201ENST00000391173 106 ntBASIC-1.23□□□□□ -2.61
APOBP04114 AC018865.2-201ENST00000423631 129 ntBASIC-1.23□□□□□ -2.61
APOBP04114 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-1.23□□□□□ -2.61
APOBP04114 Y_RNA.135-201ENST00000363439 95 ntBASIC-1.23□□□□□ -2.61
APOBP04114 RNU5A-8P-201ENST00000364102 114 ntBASIC-1.23□□□□□ -2.61
APOBP04114 RNA5SP245-201ENST00000364239 121 ntBASIC-1.23□□□□□ -2.61
APOBP04114 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.23□□□□□ -2.61
APOBP04114 RNU6-564P-201ENST00000410983 104 ntBASIC-1.23□□□□□ -2.61
APOBP04114 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-1.23□□□□□ -2.61
APOBP04114 RNU6-230P-201ENST00000362457 104 ntBASIC-1.23□□□□□ -2.61
APOBP04114 SNORD115-13-201ENST00000363358 82 ntBASIC-1.23□□□□□ -2.61
APOBP04114 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.23□□□□□ -2.61
APOBP04114 RNU6-891P-201ENST00000384280 111 ntBASIC-1.23□□□□□ -2.61
APOBP04114 MTCYBP8-201ENST00000422855 651 ntBASIC-1.23□□□□□ -2.61
APOBP04114 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.24□□□□□ -2.61
APOBP04114 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.24□□□□□ -2.61
APOBP04114 AC236972.2-201ENST00000434979 310 ntBASIC-1.24□□□□□ -2.61
APOBP04114 RNU6-252P-201ENST00000363232 107 ntBASIC-1.24□□□□□ -2.61
APOBP04114 SNORD14E-201ENST00000364009 85 ntBASIC-1.24□□□□□ -2.61
APOBP04114 RNU6-744P-201ENST00000365557 107 ntBASIC-1.24□□□□□ -2.61
APOBP04114 RNU5E-6P-201ENST00000365574 115 ntBASIC-1.24□□□□□ -2.61
APOBP04114 RNU6-1316P-201ENST00000384242 108 ntBASIC-1.24□□□□□ -2.61
APOBP04114 RNY3P4-201ENST00000384428 101 ntBASIC-1.24□□□□□ -2.61
APOBP04114 RNU6-329P-201ENST00000459618 107 ntBASIC-1.24□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms