Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.54□□□□□ -2.5
APOEP02649 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.54□□□□□ -2.5
APOEP02649 SNORD4A-201ENST00000459174 72 ntBASIC-0.54□□□□□ -2.5
APOEP02649 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.54□□□□□ -2.5
APOEP02649 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.54□□□□□ -2.5
APOEP02649 RNU6-256P-201ENST00000516747 97 ntBASIC-0.54□□□□□ -2.5
APOEP02649 RNU6-782P-201ENST00000516852 104 ntBASIC-0.54□□□□□ -2.5
APOEP02649 AC027449.1-201ENST00000608890 407 ntBASIC-0.54□□□□□ -2.5
APOEP02649 AL391262.2-201ENST00000622466 494 ntBASIC-0.54□□□□□ -2.5
APOEP02649 SNORD114-31-201ENST00000363219 75 ntBASIC-0.55□□□□□ -2.5
APOEP02649 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.55□□□□□ -2.5
APOEP02649 RNU2-61P-201ENST00000411069 191 ntBASIC-0.55□□□□□ -2.5
APOEP02649 AC236972.2-201ENST00000434979 310 ntBASIC-0.55□□□□□ -2.5
APOEP02649 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.55□□□□□ -2.5
APOEP02649 snoU13.16-201ENST00000459350 104 ntBASIC-0.55□□□□□ -2.5
APOEP02649 RNU7-66P-201ENST00000459469 62 ntBASIC-0.55□□□□□ -2.5
APOEP02649 RPL39P34-201ENST00000477141 156 ntBASIC-0.55□□□□□ -2.5
APOEP02649 MTND1P24-201ENST00000552175 861 ntBASIC-0.55□□□□□ -2.5
APOEP02649 AC055872.1-201ENST00000570978 278 ntBASIC-0.55□□□□□ -2.5
APOEP02649 AC022306.2-201ENST00000617563 647 ntBASIC-0.55□□□□□ -2.5
APOEP02649 AC022960.3-201ENST00000619794 441 ntBASIC-0.55□□□□□ -2.5
APOEP02649 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.55□□□□□ -2.5
APOEP02649 RNU6-874P-201ENST00000362390 105 ntBASIC-0.56□□□□□ -2.5
APOEP02649 PRDX4P1-201ENST00000507189 574 ntBASIC-0.56□□□□□ -2.5
APOEP02649 RNU6-848P-201ENST00000515948 107 ntBASIC-0.56□□□□□ -2.5
APOEP02649 RNU6-617P-201ENST00000516147 107 ntBASIC-0.56□□□□□ -2.5
APOEP02649 RNU6-473P-201ENST00000516164 107 ntBASIC-0.56□□□□□ -2.5
APOEP02649 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.56□□□□□ -2.5
APOEP02649 LRRC34P1-201ENST00000542742 915 ntBASIC-0.56□□□□□ -2.5
APOEP02649 AC092447.9-201ENST00000603395 144 ntBASIC-0.56□□□□□ -2.5
APOEP02649 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.56□□□□□ -2.5
APOEP02649 MIR6828-201ENST00000636181 60 ntBASIC-0.56□□□□□ -2.5
APOEP02649 RNU6-923P-201ENST00000364753 107 ntBASIC-0.57□□□□□ -2.5
APOEP02649 SNORA75-201ENST00000384158 137 ntBASIC-0.57□□□□□ -2.5
APOEP02649 SNORD38B-201ENST00000384690 67 ntBASIC-0.57□□□□□ -2.5
APOEP02649 MIR106A-201ENST00000384870 81 ntBASIC-0.57□□□□□ -2.5
APOEP02649 MCFD2P1-201ENST00000417812 300 ntBASIC-0.57□□□□□ -2.5
APOEP02649 RNU7-165P-201ENST00000458864 60 ntBASIC-0.57□□□□□ -2.5
APOEP02649 RNU6-504P-201ENST00000516568 104 ntBASIC-0.57□□□□□ -2.5
APOEP02649 MIR4752-201ENST00000579672 72 ntBASIC-0.57□□□□□ -2.5
APOEP02649 AC018638.8-201ENST00000588755 281 ntBASIC-0.57□□□□□ -2.5
APOEP02649 AL603755.1-201ENST00000619504 163 ntBASIC-0.57□□□□□ -2.5
APOEP02649 AC134878.1-201ENST00000619901 243 ntBASIC-0.57□□□□□ -2.5
APOEP02649 uc_338.22-201ENST00000622722 187 ntBASIC-0.57□□□□□ -2.5
APOEP02649 SNORA18.1-201ENST00000363418 128 ntBASIC-0.58□□□□□ -2.5
APOEP02649 RNA5SP275-201ENST00000363936 118 ntBASIC-0.58□□□□□ -2.5
APOEP02649 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.58□□□□□ -2.5
APOEP02649 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.58□□□□□ -2.5
APOEP02649 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.58□□□□□ -2.5
APOEP02649 MTND3P7-201ENST00000474435 343 ntBASIC-0.58□□□□□ -2.5
APOEP02649 RNU6-408P-201ENST00000515910 100 ntBASIC-0.58□□□□□ -2.5
APOEP02649 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.58□□□□□ -2.5
APOEP02649 MIR5701-3-201ENST00000578890 82 ntBASIC-0.58□□□□□ -2.5
APOEP02649 MIR5701-1-201ENST00000585138 82 ntBASIC-0.58□□□□□ -2.5
APOEP02649 MIR5701-2-201ENST00000615634 82 ntBASIC-0.58□□□□□ -2.5
APOEP02649 SNORA1.1-201ENST00000364671 133 ntBASIC-0.59□□□□□ -2.5
APOEP02649 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.59□□□□□ -2.5
APOEP02649 SNORD114-12-201ENST00000365400 75 ntBASIC-0.59□□□□□ -2.5
APOEP02649 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.59□□□□□ -2.5
APOEP02649 SNORD116-11-201ENST00000383882 92 ntBASIC-0.59□□□□□ -2.5
APOEP02649 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.59□□□□□ -2.5
APOEP02649 RNU6-842P-201ENST00000384269 107 ntBASIC-0.59□□□□□ -2.5
APOEP02649 RNU6-269P-201ENST00000391077 97 ntBASIC-0.59□□□□□ -2.5
APOEP02649 SNORD12B-201ENST00000410433 91 ntBASIC-0.59□□□□□ -2.5
APOEP02649 USP9YP30-201ENST00000430729 455 ntBASIC-0.59□□□□□ -2.5
APOEP02649 CHEK2P4-201ENST00000450340 246 ntBASIC-0.59□□□□□ -2.5
APOEP02649 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.59□□□□□ -2.5
APOEP02649 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.59□□□□□ -2.5
APOEP02649 AL158211.1-201ENST00000566763 763 ntBASIC-0.59□□□□□ -2.5
APOEP02649 AC087685.1-201ENST00000587507 141 ntBASIC-0.59□□□□□ -2.5
APOEP02649 AL355297.3-201ENST00000604082 446 ntBASIC-0.59□□□□□ -2.5
APOEP02649 AC087752.4-201ENST00000605911 462 ntBASIC-0.59□□□□□ -2.5
APOEP02649 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.6□□□□□ -2.51
APOEP02649 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.6□□□□□ -2.51
APOEP02649 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.6□□□□□ -2.51
APOEP02649 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.6□□□□□ -2.51
APOEP02649 RNU6-192P-201ENST00000391253 100 ntBASIC-0.6□□□□□ -2.51
APOEP02649 AC096531.1-201ENST00000419107 107 ntBASIC-0.6□□□□□ -2.51
APOEP02649 MIR4645-201ENST00000583158 77 ntBASIC-0.6□□□□□ -2.51
APOEP02649 JPX_2.1-201ENST00000614161 69 ntBASIC-0.6□□□□□ -2.51
APOEP02649 MIR8066-201ENST00000617280 78 ntBASIC-0.6□□□□□ -2.51
APOEP02649 Z69908.1-201ENST00000622603 247 ntBASIC-0.6□□□□□ -2.51
APOEP02649 AC068137.3-201ENST00000639191 341 ntBASIC-0.6□□□□□ -2.51
APOEP02649 RNU6-961P-201ENST00000363893 105 ntBASIC-0.61□□□□□ -2.51
APOEP02649 SNORA24-201ENST00000384096 131 ntBASIC-0.61□□□□□ -2.51
APOEP02649 Y_RNA.481-201ENST00000384373 102 ntBASIC-0.61□□□□□ -2.51
APOEP02649 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.61□□□□□ -2.51
APOEP02649 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.61□□□□□ -2.51
APOEP02649 snoU13.2-201ENST00000459201 104 ntBASIC-0.61□□□□□ -2.51
APOEP02649 AC138869.1-201ENST00000568623 124 ntBASIC-0.61□□□□□ -2.51
APOEP02649 AC008507.4-201ENST00000585464 127 ntBASIC-0.61□□□□□ -2.51
APOEP02649 AL050303.3-201ENST00000613704 284 ntBASIC-0.61□□□□□ -2.51
APOEP02649 AC091304.10-201ENST00000641554 121 ntBASIC-0.61□□□□□ -2.51
APOEP02649 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.62□□□□□ -2.51
APOEP02649 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.62□□□□□ -2.51
APOEP02649 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.62□□□□□ -2.51
APOEP02649 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.62□□□□□ -2.51
APOEP02649 Y_RNA.530-201ENST00000384587 101 ntBASIC-0.62□□□□□ -2.51
APOEP02649 SNORD72-201ENST00000390994 80 ntBASIC-0.62□□□□□ -2.51
APOEP02649 RNA5SP163-201ENST00000410304 99 ntBASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms