Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 MTND3P9-201ENST00000429526 346 ntBASIC-0.99□□□□□ -2.57
TNFP01375 SNRPGP14-201ENST00000435400 219 ntBASIC-0.99□□□□□ -2.57
TNFP01375 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-0.99□□□□□ -2.57
TNFP01375 SNORA25.10-201ENST00000515926 124 ntBASIC-0.99□□□□□ -2.57
TNFP01375 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.99□□□□□ -2.57
TNFP01375 AC022784.5-201ENST00000522241 437 ntBASIC-0.99□□□□□ -2.57
TNFP01375 MTATP6P15-201ENST00000527233 835 ntBASIC-0.99□□□□□ -2.57
TNFP01375 AP003181.2-201ENST00000528941 181 ntBASIC-0.99□□□□□ -2.57
TNFP01375 MTCO3P23-201ENST00000561363 289 ntBASIC-0.99□□□□□ -2.57
TNFP01375 POLR3GP2-201ENST00000588366 668 ntBASIC-0.99□□□□□ -2.57
TNFP01375 MIR6502-201ENST00000617296 76 ntBASIC-0.99□□□□□ -2.57
TNFP01375 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.99□□□□□ -2.57
TNFP01375 AC127459.3-201ENST00000624328 466 ntBASIC-0.99□□□□□ -2.57
TNFP01375 RNA5SP403-201ENST00000363598 108 ntBASIC-1□□□□□ -2.57
TNFP01375 SNORD115-28-201ENST00000363931 81 ntBASIC-1□□□□□ -2.57
TNFP01375 RNU6-1062P-201ENST00000383908 107 ntBASIC-1□□□□□ -2.57
TNFP01375 RNU6-1036P-201ENST00000383959 104 ntBASIC-1□□□□□ -2.57
TNFP01375 MIR181B2-201ENST00000385004 89 ntBASIC-1□□□□□ -2.57
TNFP01375 SNORD12C-201ENST00000386307 89 ntBASIC-1□□□□□ -2.57
TNFP01375 U8.15-201ENST00000390947 134 ntBASIC-1□□□□□ -2.57
TNFP01375 HMGN2P32-201ENST00000444648 269 ntBASIC-1□□□□□ -2.57
TNFP01375 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1□□□□□ -2.57
TNFP01375 RNU6-1007P-201ENST00000516586 107 ntBASIC-1□□□□□ -2.57
TNFP01375 AC090616.2-202ENST00000584248 222 ntBASIC-1□□□□□ -2.57
TNFP01375 AC068137.4-201ENST00000638485 296 ntBASIC-1□□□□□ -2.57
TNFP01375 Y_RNA.123-201ENST00000363338 102 ntBASIC-1.01□□□□□ -2.57
TNFP01375 Y_RNA.184-201ENST00000363884 108 ntBASIC-1.01□□□□□ -2.57
TNFP01375 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.01□□□□□ -2.57
TNFP01375 Y_RNA.465-201ENST00000384293 102 ntBASIC-1.01□□□□□ -2.57
TNFP01375 RNU6-535P-201ENST00000384722 107 ntBASIC-1.01□□□□□ -2.57
TNFP01375 RNU6-913P-201ENST00000390913 95 ntBASIC-1.01□□□□□ -2.57
TNFP01375 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.01□□□□□ -2.57
TNFP01375 AL603914.1-201ENST00000401964 204 ntBASIC-1.01□□□□□ -2.57
TNFP01375 SSR1P2-201ENST00000415208 787 ntBASIC-1.01□□□□□ -2.57
TNFP01375 AC016907.1-201ENST00000419483 435 ntBASIC-1.01□□□□□ -2.57
TNFP01375 USP9YP30-201ENST00000430729 455 ntBASIC-1.01□□□□□ -2.57
TNFP01375 AC098614.3-201ENST00000438957 440 ntBASIC-1.01□□□□□ -2.57
TNFP01375 FCF1P4-201ENST00000448326 183 ntBASIC-1.01□□□□□ -2.57
TNFP01375 RPL30P15-201ENST00000457129 321 ntBASIC-1.01□□□□□ -2.57
TNFP01375 AC116353.3-201ENST00000511215 249 ntBASIC-1.01□□□□□ -2.57
TNFP01375 RNU6-830P-201ENST00000516353 107 ntBASIC-1.01□□□□□ -2.57
TNFP01375 SCARNA24.1-201ENST00000516465 137 ntBASIC-1.01□□□□□ -2.57
TNFP01375 SNORA25.14-201ENST00000516481 132 ntBASIC-1.01□□□□□ -2.57
TNFP01375 RNA5SP54-201ENST00000516951 92 ntBASIC-1.01□□□□□ -2.57
TNFP01375 RNU7-181P-201ENST00000517234 74 ntBASIC-1.01□□□□□ -2.57
TNFP01375 AP000676.1-201ENST00000533307 52 ntBASIC-1.01□□□□□ -2.57
TNFP01375 AC007671.2-201ENST00000637344 619 ntBASIC-1.01□□□□□ -2.57
TNFP01375 RNU6-502P-201ENST00000362419 108 ntBASIC-1.02□□□□□ -2.57
TNFP01375 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.02□□□□□ -2.57
TNFP01375 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.02□□□□□ -2.57
TNFP01375 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.02□□□□□ -2.57
TNFP01375 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.02□□□□□ -2.57
TNFP01375 RNU6-393P-201ENST00000384475 107 ntBASIC-1.02□□□□□ -2.57
TNFP01375 RNU6-476P-201ENST00000384726 107 ntBASIC-1.02□□□□□ -2.57
TNFP01375 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.02□□□□□ -2.57
TNFP01375 SNORD73A-201ENST00000386062 65 ntBASIC-1.02□□□□□ -2.57
TNFP01375 RNU6-757P-201ENST00000410334 100 ntBASIC-1.02□□□□□ -2.57
TNFP01375 RNU6-855P-201ENST00000410395 104 ntBASIC-1.02□□□□□ -2.57
TNFP01375 AL354751.2-201ENST00000415471 210 ntBASIC-1.02□□□□□ -2.57
TNFP01375 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.02□□□□□ -2.57
TNFP01375 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.02□□□□□ -2.57
TNFP01375 AL512286.1-201ENST00000439244 400 ntBASIC-1.02□□□□□ -2.57
TNFP01375 AC011352.1-201ENST00000512300 793 ntBASIC-1.02□□□□□ -2.57
TNFP01375 MIR4491-201ENST00000581087 68 ntBASIC-1.02□□□□□ -2.57
TNFP01375 MIR4473-201ENST00000583731 91 ntBASIC-1.02□□□□□ -2.57
TNFP01375 AL391834.2-201ENST00000609982 546 ntBASIC-1.02□□□□□ -2.57
TNFP01375 MIR8055-201ENST00000610739 97 ntBASIC-1.02□□□□□ -2.57
TNFP01375 AC011603.4-201ENST00000611325 277 ntBASIC-1.02□□□□□ -2.57
TNFP01375 ZNF299P-201ENST00000406845 1804 ntBASIC-1.03□□□□□ -2.57
TNFP01375 RNU6-1084P-201ENST00000362498 107 ntBASIC-1.03□□□□□ -2.57
TNFP01375 SNORD115-39-201ENST00000363694 82 ntBASIC-1.03□□□□□ -2.57
TNFP01375 RNU6-597P-201ENST00000365620 102 ntBASIC-1.03□□□□□ -2.57
TNFP01375 SNORD24-201ENST00000383884 75 ntBASIC-1.03□□□□□ -2.57
TNFP01375 Y_RNA.472-201ENST00000384322 102 ntBASIC-1.03□□□□□ -2.57
TNFP01375 RNU6-809P-201ENST00000384461 107 ntBASIC-1.03□□□□□ -2.57
TNFP01375 SNORD70.1-201ENST00000391007 85 ntBASIC-1.03□□□□□ -2.57
TNFP01375 SNORD115.1-201ENST00000391109 76 ntBASIC-1.03□□□□□ -2.57
TNFP01375 USP9YP16-201ENST00000430287 407 ntBASIC-1.03□□□□□ -2.57
TNFP01375 AL353813.1-201ENST00000440700 253 ntBASIC-1.03□□□□□ -2.57
TNFP01375 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.03□□□□□ -2.57
TNFP01375 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-1.03□□□□□ -2.57
TNFP01375 AC023449.1-201ENST00000454464 154 ntBASIC-1.03□□□□□ -2.57
TNFP01375 SNORA13-201ENST00000458790 133 ntBASIC-1.03□□□□□ -2.57
TNFP01375 RNA5SP272-201ENST00000516095 111 ntBASIC-1.03□□□□□ -2.57
TNFP01375 SNORA25.16-201ENST00000516741 121 ntBASIC-1.03□□□□□ -2.57
TNFP01375 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-1.03□□□□□ -2.57
TNFP01375 MTND1P35-201ENST00000526739 508 ntBASIC-1.03□□□□□ -2.57
TNFP01375 AL137161.1-201ENST00000532231 390 ntBASIC-1.03□□□□□ -2.57
TNFP01375 AC138207.3-201ENST00000585289 166 ntBASIC-1.03□□□□□ -2.57
TNFP01375 AP000942.4-201ENST00000604811 241 ntBASIC-1.03□□□□□ -2.57
TNFP01375 RNU6-85P-201ENST00000605989 107 ntBASIC-1.03□□□□□ -2.57
TNFP01375 MIR409-201ENST00000362237 79 ntBASIC-1.04□□□□□ -2.58
TNFP01375 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.04□□□□□ -2.58
TNFP01375 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.04□□□□□ -2.58
TNFP01375 RNA5SP86-201ENST00000390869 98 ntBASIC-1.04□□□□□ -2.58
TNFP01375 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.04□□□□□ -2.58
TNFP01375 RNU6-602P-201ENST00000411155 105 ntBASIC-1.04□□□□□ -2.58
TNFP01375 AC119618.1-201ENST00000434191 222 ntBASIC-1.04□□□□□ -2.58
TNFP01375 RPL22P17-201ENST00000438729 315 ntBASIC-1.04□□□□□ -2.58
TNFP01375 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.04□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 327.7 ms