Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 7SK.10-201ENST00000621414 298 ntBASIC0.63□□□□□ -2.31
TGFAP01135 AC138305.3-201ENST00000624988 240 ntBASIC0.63□□□□□ -2.31
TGFAP01135 RNU6-1335P-201ENST00000365426 107 ntBASIC0.62□□□□□ -2.31
TGFAP01135 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
TGFAP01135 RNU6-442P-201ENST00000383968 104 ntBASIC0.62□□□□□ -2.31
TGFAP01135 Y_RNA.474-201ENST00000384341 102 ntBASIC0.62□□□□□ -2.31
TGFAP01135 MTCO3P10-201ENST00000455912 772 ntBASIC0.62□□□□□ -2.31
TGFAP01135 RNU6-351P-201ENST00000516097 100 ntBASIC0.62□□□□□ -2.31
TGFAP01135 RNU6-830P-201ENST00000516353 107 ntBASIC0.62□□□□□ -2.31
TGFAP01135 POLR3GP1-201ENST00000594073 261 ntBASIC0.62□□□□□ -2.31
TGFAP01135 AP003357.1-201ENST00000604497 148 ntBASIC0.62□□□□□ -2.31
TGFAP01135 JPX_2.1-201ENST00000614161 69 ntBASIC0.62□□□□□ -2.31
TGFAP01135 Y_RNA.203-201ENST00000364106 102 ntBASIC0.61□□□□□ -2.31
TGFAP01135 RNY3P11-201ENST00000364153 102 ntBASIC0.61□□□□□ -2.31
TGFAP01135 Y_RNA.242-201ENST00000364473 110 ntBASIC0.61□□□□□ -2.31
TGFAP01135 Y_RNA.248-201ENST00000364501 109 ntBASIC0.61□□□□□ -2.31
TGFAP01135 Y_RNA.310-201ENST00000365063 113 ntBASIC0.61□□□□□ -2.31
TGFAP01135 Y_RNA.462-201ENST00000384268 102 ntBASIC0.61□□□□□ -2.31
TGFAP01135 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.61□□□□□ -2.31
TGFAP01135 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.61□□□□□ -2.31
TGFAP01135 AC005534.2-201ENST00000431047 433 ntBASIC0.61□□□□□ -2.31
TGFAP01135 RNU6-966P-201ENST00000516479 104 ntBASIC0.61□□□□□ -2.31
TGFAP01135 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
TGFAP01135 AC010205.1-201ENST00000616668 449 ntBASIC0.61□□□□□ -2.31
TGFAP01135 AC023934.1-201ENST00000574529 2389 ntBASIC0.61□□□□□ -2.31
TGFAP01135 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
TGFAP01135 MIR193B-201ENST00000384907 83 ntBASIC0.6□□□□□ -2.31
TGFAP01135 MIR559-201ENST00000385188 96 ntBASIC0.6□□□□□ -2.31
TGFAP01135 MIR802-201ENST00000390235 94 ntBASIC0.6□□□□□ -2.31
TGFAP01135 RNU6-613P-201ENST00000410412 108 ntBASIC0.6□□□□□ -2.31
TGFAP01135 RNU6-733P-201ENST00000410759 104 ntBASIC0.6□□□□□ -2.31
TGFAP01135 RNU6-1304P-201ENST00000411374 106 ntBASIC0.6□□□□□ -2.31
TGFAP01135 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.6□□□□□ -2.31
TGFAP01135 MIR2115-201ENST00000516657 100 ntBASIC0.6□□□□□ -2.31
TGFAP01135 MIR5188-201ENST00000583467 113 ntBASIC0.6□□□□□ -2.31
TGFAP01135 RNU6-94P-201ENST00000607728 107 ntBASIC0.6□□□□□ -2.31
TGFAP01135 MIR936-201ENST00000401264 98 ntBASIC0.59□□□□□ -2.31
TGFAP01135 MIR1827-201ENST00000408549 66 ntBASIC0.59□□□□□ -2.31
TGFAP01135 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.59□□□□□ -2.31
TGFAP01135 RNU6-1007P-201ENST00000516586 107 ntBASIC0.59□□□□□ -2.31
TGFAP01135 AC006600.1-201ENST00000572529 153 ntBASIC0.59□□□□□ -2.31
TGFAP01135 MIR2681-201ENST00000581814 105 ntBASIC0.59□□□□□ -2.31
TGFAP01135 AL355073.2-201ENST00000612106 557 ntBASIC0.59□□□□□ -2.31
TGFAP01135 AL138825.1-201ENST00000618587 192 ntBASIC0.59□□□□□ -2.31
TGFAP01135 MIR6516-201ENST00000630554 81 ntBASIC0.59□□□□□ -2.31
TGFAP01135 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.58□□□□□ -2.32
TGFAP01135 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
TGFAP01135 RNA5SP347-201ENST00000362445 119 ntBASIC0.58□□□□□ -2.32
TGFAP01135 Y_RNA.259-201ENST00000364619 101 ntBASIC0.58□□□□□ -2.32
TGFAP01135 MIR1302-7-201ENST00000408841 72 ntBASIC0.58□□□□□ -2.32
TGFAP01135 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.58□□□□□ -2.32
TGFAP01135 AC098614.3-201ENST00000438957 440 ntBASIC0.58□□□□□ -2.32
TGFAP01135 AC117454.1-201ENST00000491120 168 ntBASIC0.58□□□□□ -2.32
TGFAP01135 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.58□□□□□ -2.32
TGFAP01135 AC091951.2-201ENST00000500762 203 ntBASIC0.58□□□□□ -2.32
TGFAP01135 AC024405.2-202ENST00000532731 184 ntBASIC0.58□□□□□ -2.32
TGFAP01135 AC018659.1-201ENST00000551083 169 ntBASIC0.58□□□□□ -2.32
TGFAP01135 AC127455.1-201ENST00000565496 145 ntBASIC0.58□□□□□ -2.32
TGFAP01135 AL355375.2-201ENST00000574825 175 ntBASIC0.58□□□□□ -2.32
TGFAP01135 MIR548AR-201ENST00000582191 57 ntBASIC0.58□□□□□ -2.32
TGFAP01135 Y_RNA.772-201ENST00000606692 102 ntBASIC0.58□□□□□ -2.32
TGFAP01135 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.57□□□□□ -2.32
TGFAP01135 SNORD114-23-201ENST00000363536 72 ntBASIC0.57□□□□□ -2.32
TGFAP01135 Y_RNA.148-201ENST00000363557 117 ntBASIC0.57□□□□□ -2.32
TGFAP01135 Y_RNA.331-201ENST00000365267 102 ntBASIC0.57□□□□□ -2.32
TGFAP01135 Y_RNA.387-201ENST00000383918 102 ntBASIC0.57□□□□□ -2.32
TGFAP01135 RNU6-1040P-201ENST00000383974 107 ntBASIC0.57□□□□□ -2.32
TGFAP01135 Y_RNA.428-201ENST00000384078 102 ntBASIC0.57□□□□□ -2.32
TGFAP01135 RNU1-119P-201ENST00000391122 165 ntBASIC0.57□□□□□ -2.32
TGFAP01135 RPL23AP54-201ENST00000495129 419 ntBASIC0.57□□□□□ -2.32
TGFAP01135 RNU7-115P-201ENST00000516433 55 ntBASIC0.57□□□□□ -2.32
TGFAP01135 AC004812.1-201ENST00000540773 146 ntBASIC0.57□□□□□ -2.32
TGFAP01135 MIR1273G-201ENST00000577677 100 ntBASIC0.57□□□□□ -2.32
TGFAP01135 Pinc.1-201ENST00000616452 154 ntBASIC0.57□□□□□ -2.32
TGFAP01135 MIR548AY-201ENST00000617669 107 ntBASIC0.57□□□□□ -2.32
TGFAP01135 Y_RNA.168-201ENST00000363740 102 ntBASIC0.56□□□□□ -2.32
TGFAP01135 SNORD105-201ENST00000386910 85 ntBASIC0.56□□□□□ -2.32
TGFAP01135 RNY4P36-201ENST00000391116 96 ntBASIC0.56□□□□□ -2.32
TGFAP01135 RNU4-54P-201ENST00000516428 129 ntBASIC0.56□□□□□ -2.32
TGFAP01135 RNU6-699P-201ENST00000517081 110 ntBASIC0.56□□□□□ -2.32
TGFAP01135 Z83818.1-201ENST00000603584 150 ntBASIC0.56□□□□□ -2.32
TGFAP01135 AC104695.3-201ENST00000604052 296 ntBASIC0.56□□□□□ -2.32
TGFAP01135 MIR4272-201ENST00000635924 64 ntBASIC0.56□□□□□ -2.32
TGFAP01135 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
TGFAP01135 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
TGFAP01135 MIR1-1-201ENST00000362147 71 ntBASIC0.55□□□□□ -2.32
TGFAP01135 RNU6-654P-201ENST00000364373 107 ntBASIC0.55□□□□□ -2.32
TGFAP01135 RNU6-396P-201ENST00000365369 105 ntBASIC0.55□□□□□ -2.32
TGFAP01135 RNU6-708P-201ENST00000384217 107 ntBASIC0.55□□□□□ -2.32
TGFAP01135 SNORA2B-201ENST00000384583 137 ntBASIC0.55□□□□□ -2.32
TGFAP01135 SNORD28B-201ENST00000390993 75 ntBASIC0.55□□□□□ -2.32
TGFAP01135 MTND5P15-201ENST00000434246 349 ntBASIC0.55□□□□□ -2.32
TGFAP01135 SNRPGP14-201ENST00000435400 219 ntBASIC0.55□□□□□ -2.32
TGFAP01135 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.55□□□□□ -2.32
TGFAP01135 Y_RNA.713-201ENST00000517013 96 ntBASIC0.55□□□□□ -2.32
TGFAP01135 SNORD116.3-201ENST00000517176 78 ntBASIC0.55□□□□□ -2.32
TGFAP01135 RNU6-1209P-201ENST00000363655 107 ntBASIC0.54□□□□□ -2.32
TGFAP01135 SNORA1.2-201ENST00000365189 134 ntBASIC0.54□□□□□ -2.32
TGFAP01135 Y_RNA.376-201ENST00000365638 108 ntBASIC0.54□□□□□ -2.32
TGFAP01135 Y_RNA.384-201ENST00000383909 102 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 226.4 ms