Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 JPX_2.1-201ENST00000614161 69 ntBASIC1.41□□□□□ -2.18
DDX58O95786 MIR548AY-201ENST00000617669 107 ntBASIC1.41□□□□□ -2.18
DDX58O95786 AC027279.3-201ENST00000625055 122 ntBASIC1.41□□□□□ -2.18
DDX58O95786 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.41□□□□□ -2.18
DDX58O95786 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.18
DDX58O95786 SNORD114-22-201ENST00000365423 72 ntBASIC1.4□□□□□ -2.19
DDX58O95786 RNU6-939P-201ENST00000384634 107 ntBASIC1.4□□□□□ -2.19
DDX58O95786 MIR522-201ENST00000385071 87 ntBASIC1.4□□□□□ -2.19
DDX58O95786 MIR653-201ENST00000385279 96 ntBASIC1.4□□□□□ -2.19
DDX58O95786 ELOCP20-201ENST00000422460 345 ntBASIC1.4□□□□□ -2.19
DDX58O95786 RNU6-496P-201ENST00000516145 99 ntBASIC1.4□□□□□ -2.19
DDX58O95786 RNU7-115P-201ENST00000516433 55 ntBASIC1.4□□□□□ -2.19
DDX58O95786 AC136628.3-201ENST00000521868 290 ntBASIC1.4□□□□□ -2.19
DDX58O95786 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.4□□□□□ -2.19
DDX58O95786 AL512605.2-201ENST00000592972 256 ntBASIC1.4□□□□□ -2.19
DDX58O95786 AC136443.5-201ENST00000603741 370 ntBASIC1.4□□□□□ -2.19
DDX58O95786 AL355297.3-201ENST00000604082 446 ntBASIC1.4□□□□□ -2.19
DDX58O95786 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.39□□□□□ -2.19
DDX58O95786 AC134026.1-201ENST00000623249 2239 ntBASIC1.39□□□□□ -2.19
DDX58O95786 Y_RNA.105-201ENST00000363182 111 ntBASIC1.39□□□□□ -2.19
DDX58O95786 Y_RNA.203-201ENST00000364106 102 ntBASIC1.39□□□□□ -2.19
DDX58O95786 Y_RNA.214-201ENST00000364201 112 ntBASIC1.39□□□□□ -2.19
DDX58O95786 U8.5-201ENST00000364528 136 ntBASIC1.39□□□□□ -2.19
DDX58O95786 RNU1-93P-201ENST00000364704 169 ntBASIC1.39□□□□□ -2.19
DDX58O95786 snoU2-30.1-201ENST00000365012 70 ntBASIC1.39□□□□□ -2.19
DDX58O95786 RNU6-639P-201ENST00000384074 107 ntBASIC1.39□□□□□ -2.19
DDX58O95786 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.39□□□□□ -2.19
DDX58O95786 HSPE1P25-201ENST00000455484 251 ntBASIC1.39□□□□□ -2.19
DDX58O95786 AC098869.1-201ENST00000481627 292 ntBASIC1.39□□□□□ -2.19
DDX58O95786 RN7SKP179-201ENST00000516126 217 ntBASIC1.39□□□□□ -2.19
DDX58O95786 SNORD45.4-201ENST00000516629 73 ntBASIC1.39□□□□□ -2.19
DDX58O95786 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.39□□□□□ -2.19
DDX58O95786 AC008269.2-201ENST00000561915 1105 ntBASIC1.39□□□□□ -2.19
DDX58O95786 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.39□□□□□ -2.19
DDX58O95786 SNORA4-201ENST00000584302 138 ntBASIC1.39□□□□□ -2.19
DDX58O95786 Y_RNA.222-201ENST00000364264 102 ntBASIC1.38□□□□□ -2.19
DDX58O95786 SNORA33.2-201ENST00000365413 134 ntBASIC1.38□□□□□ -2.19
DDX58O95786 Y_RNA.418-201ENST00000384029 102 ntBASIC1.38□□□□□ -2.19
DDX58O95786 MIR452-201ENST00000385020 85 ntBASIC1.38□□□□□ -2.19
DDX58O95786 MTCO2P33-201ENST00000402100 465 ntBASIC1.38□□□□□ -2.19
DDX58O95786 MIR1298-201ENST00000408783 112 ntBASIC1.38□□□□□ -2.19
DDX58O95786 LINC01399-202ENST00000458450 244 ntBASIC1.38□□□□□ -2.19
DDX58O95786 RNU7-141P-201ENST00000459304 62 ntBASIC1.38□□□□□ -2.19
DDX58O95786 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.38□□□□□ -2.19
DDX58O95786 SNORA31.4-201ENST00000516049 129 ntBASIC1.38□□□□□ -2.19
DDX58O95786 RNU6-191P-201ENST00000516295 94 ntBASIC1.38□□□□□ -2.19
DDX58O95786 RNU6-764P-201ENST00000516396 105 ntBASIC1.38□□□□□ -2.19
DDX58O95786 SNORA70.22-201ENST00000517160 124 ntBASIC1.38□□□□□ -2.19
DDX58O95786 RNU6-165P-201ENST00000517170 99 ntBASIC1.38□□□□□ -2.19
DDX58O95786 AC127455.1-201ENST00000565496 145 ntBASIC1.38□□□□□ -2.19
DDX58O95786 MIR4762-201ENST00000585261 75 ntBASIC1.38□□□□□ -2.19
DDX58O95786 AC037487.3-201ENST00000606668 112 ntBASIC1.38□□□□□ -2.19
DDX58O95786 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
DDX58O95786 RNU6-514P-201ENST00000384208 107 ntBASIC1.37□□□□□ -2.19
DDX58O95786 MIR618-201ENST00000385287 98 ntBASIC1.37□□□□□ -2.19
DDX58O95786 MIR802-201ENST00000390235 94 ntBASIC1.37□□□□□ -2.19
DDX58O95786 SNORA53-201ENST00000391141 249 ntBASIC1.37□□□□□ -2.19
DDX58O95786 SNORA36B-201ENST00000410438 131 ntBASIC1.37□□□□□ -2.19
DDX58O95786 RNU6-121P-201ENST00000410525 99 ntBASIC1.37□□□□□ -2.19
DDX58O95786 RNU2-14P-201ENST00000411053 191 ntBASIC1.37□□□□□ -2.19
DDX58O95786 MRPS35P2-201ENST00000508242 191 ntBASIC1.37□□□□□ -2.19
DDX58O95786 RNU6-1143P-201ENST00000516125 104 ntBASIC1.37□□□□□ -2.19
DDX58O95786 RNU6-1137P-201ENST00000517073 99 ntBASIC1.37□□□□□ -2.19
DDX58O95786 AL078603.1-201ENST00000603824 313 ntBASIC1.37□□□□□ -2.19
DDX58O95786 BX284668.6-201ENST00000606899 438 ntBASIC1.37□□□□□ -2.19
DDX58O95786 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.37□□□□□ -2.19
DDX58O95786 MIR6767-201ENST00000637302 66 ntBASIC1.37□□□□□ -2.19
DDX58O95786 Y_RNA.64-201ENST00000362845 102 ntBASIC1.36□□□□□ -2.19
DDX58O95786 RNU6-801P-201ENST00000364087 105 ntBASIC1.36□□□□□ -2.19
DDX58O95786 RNU6-1227P-201ENST00000383981 107 ntBASIC1.36□□□□□ -2.19
DDX58O95786 SNORA72.4-201ENST00000384174 132 ntBASIC1.36□□□□□ -2.19
DDX58O95786 SNORA25-201ENST00000384384 134 ntBASIC1.36□□□□□ -2.19
DDX58O95786 MIR526A1-201ENST00000384897 85 ntBASIC1.36□□□□□ -2.19
DDX58O95786 MIR516B2-201ENST00000385190 85 ntBASIC1.36□□□□□ -2.19
DDX58O95786 SNORD41-201ENST00000386967 70 ntBASIC1.36□□□□□ -2.19
DDX58O95786 Y_RNA.581-201ENST00000391017 97 ntBASIC1.36□□□□□ -2.19
DDX58O95786 SNORA31.2-201ENST00000516019 134 ntBASIC1.36□□□□□ -2.19
DDX58O95786 SNORA25.1-201ENST00000362326 128 ntBASIC1.35□□□□□ -2.19
DDX58O95786 SNORD114-27-201ENST00000363766 70 ntBASIC1.35□□□□□ -2.19
DDX58O95786 SNORD14E-201ENST00000364009 85 ntBASIC1.35□□□□□ -2.19
DDX58O95786 SNORD50B-201ENST00000364995 70 ntBASIC1.35□□□□□ -2.19
DDX58O95786 RNU6-806P-201ENST00000365147 105 ntBASIC1.35□□□□□ -2.19
DDX58O95786 RNU6-290P-201ENST00000365212 101 ntBASIC1.35□□□□□ -2.19
DDX58O95786 MIR215-201ENST00000384858 110 ntBASIC1.35□□□□□ -2.19
DDX58O95786 MTCYBP6-201ENST00000441810 138 ntBASIC1.35□□□□□ -2.19
DDX58O95786 RNU6-437P-201ENST00000459408 95 ntBASIC1.35□□□□□ -2.19
DDX58O95786 AL133373.1-201ENST00000497098 94 ntBASIC1.35□□□□□ -2.19
DDX58O95786 RNU2-31P-201ENST00000516954 155 ntBASIC1.35□□□□□ -2.19
DDX58O95786 MIR2681-201ENST00000581814 105 ntBASIC1.35□□□□□ -2.19
DDX58O95786 AL022345.2-201ENST00000606307 135 ntBASIC1.35□□□□□ -2.19
DDX58O95786 Y_RNA.136-201ENST00000363444 102 ntBASIC1.34□□□□□ -2.19
DDX58O95786 RNU6-1209P-201ENST00000363655 107 ntBASIC1.34□□□□□ -2.19
DDX58O95786 SNORA26.5-201ENST00000391215 123 ntBASIC1.34□□□□□ -2.19
DDX58O95786 RNU6-985P-201ENST00000410182 104 ntBASIC1.34□□□□□ -2.19
DDX58O95786 RPL21P38-201ENST00000418090 167 ntBASIC1.34□□□□□ -2.19
DDX58O95786 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.34□□□□□ -2.19
DDX58O95786 MTCO1P5-201ENST00000433573 344 ntBASIC1.34□□□□□ -2.19
DDX58O95786 AP003733.2-201ENST00000529409 171 ntBASIC1.34□□□□□ -2.19
DDX58O95786 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.34□□□□□ -2.19
DDX58O95786 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 189.9 ms