Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL121890.5-201ENST00000620848 304 ntBASIC2.47□□□□□ -2.01
CNOT4O95628 MIR6079-201ENST00000635807 62 ntBASIC2.47□□□□□ -2.01
CNOT4O95628 MIR338-201ENST00000636369 67 ntBASIC2.47□□□□□ -2.01
CNOT4O95628 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CNOT4O95628 Y_RNA.99-201ENST00000363138 105 ntBASIC2.46□□□□□ -2.02
CNOT4O95628 SNORD24-201ENST00000383884 75 ntBASIC2.46□□□□□ -2.02
CNOT4O95628 Y_RNA.651-201ENST00000459380 103 ntBASIC2.46□□□□□ -2.02
CNOT4O95628 AC096725.1-201ENST00000514266 313 ntBASIC2.46□□□□□ -2.02
CNOT4O95628 RNU6-341P-201ENST00000516973 96 ntBASIC2.46□□□□□ -2.02
CNOT4O95628 RNU2-19P-201ENST00000517288 84 ntBASIC2.46□□□□□ -2.02
CNOT4O95628 AL358944.1-201ENST00000528537 144 ntBASIC2.46□□□□□ -2.02
CNOT4O95628 AC079600.2-201ENST00000550076 130 ntBASIC2.46□□□□□ -2.02
CNOT4O95628 MIR3613-201ENST00000579844 87 ntBASIC2.46□□□□□ -2.02
CNOT4O95628 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.46□□□□□ -2.02
CNOT4O95628 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.46□□□□□ -2.02
CNOT4O95628 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
CNOT4O95628 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
CNOT4O95628 Y_RNA.35-201ENST00000362601 101 ntBASIC2.45□□□□□ -2.02
CNOT4O95628 RNU6-888P-201ENST00000363010 101 ntBASIC2.45□□□□□ -2.02
CNOT4O95628 Y_RNA.242-201ENST00000364473 110 ntBASIC2.45□□□□□ -2.02
CNOT4O95628 Y_RNA.267-201ENST00000364679 109 ntBASIC2.45□□□□□ -2.02
CNOT4O95628 Y_RNA.346-201ENST00000365385 112 ntBASIC2.45□□□□□ -2.02
CNOT4O95628 RNU6-1292P-201ENST00000383856 107 ntBASIC2.45□□□□□ -2.02
CNOT4O95628 MIR518A2-201ENST00000384966 87 ntBASIC2.45□□□□□ -2.02
CNOT4O95628 MIRLET7F2-201ENST00000385277 83 ntBASIC2.45□□□□□ -2.02
CNOT4O95628 SNORD72-201ENST00000390994 80 ntBASIC2.45□□□□□ -2.02
CNOT4O95628 SNORD109B-201ENST00000458961 67 ntBASIC2.45□□□□□ -2.02
CNOT4O95628 SNORD109A-201ENST00000459128 67 ntBASIC2.45□□□□□ -2.02
CNOT4O95628 AC055731.1-201ENST00000474387 401 ntBASIC2.45□□□□□ -2.02
CNOT4O95628 RNU6-1270P-201ENST00000517128 108 ntBASIC2.45□□□□□ -2.02
CNOT4O95628 AC091544.4-201ENST00000555268 342 ntBASIC2.45□□□□□ -2.02
CNOT4O95628 MIR4287-201ENST00000579398 78 ntBASIC2.45□□□□□ -2.02
CNOT4O95628 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.45□□□□□ -2.02
CNOT4O95628 AC087685.1-201ENST00000587507 141 ntBASIC2.45□□□□□ -2.02
CNOT4O95628 AC025166.1-201ENST00000612411 163 ntBASIC2.45□□□□□ -2.02
CNOT4O95628 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
CNOT4O95628 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CNOT4O95628 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.44□□□□□ -2.02
CNOT4O95628 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CNOT4O95628 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.44□□□□□ -2.02
CNOT4O95628 RNU6-1164P-201ENST00000364428 107 ntBASIC2.44□□□□□ -2.02
CNOT4O95628 SNORD61-201ENST00000384252 73 ntBASIC2.44□□□□□ -2.02
CNOT4O95628 MIR144-201ENST00000384886 86 ntBASIC2.44□□□□□ -2.02
CNOT4O95628 MIR181B1-201ENST00000385240 110 ntBASIC2.44□□□□□ -2.02
CNOT4O95628 AL138827.1-201ENST00000402666 306 ntBASIC2.44□□□□□ -2.02
CNOT4O95628 AL021397.1-201ENST00000451806 248 ntBASIC2.44□□□□□ -2.02
CNOT4O95628 RNA5SP236-201ENST00000516169 116 ntBASIC2.44□□□□□ -2.02
CNOT4O95628 RNU1-142P-201ENST00000516682 145 ntBASIC2.44□□□□□ -2.02
CNOT4O95628 Y_RNA.714-201ENST00000517065 90 ntBASIC2.44□□□□□ -2.02
CNOT4O95628 AC121758.2-201ENST00000553271 193 ntBASIC2.44□□□□□ -2.02
CNOT4O95628 ZNF861P-201ENST00000588126 639 ntBASIC2.44□□□□□ -2.02
CNOT4O95628 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.44□□□□□ -2.02
CNOT4O95628 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.44□□□□□ -2.02
CNOT4O95628 U6.108-201ENST00000637764 58 ntBASIC2.44□□□□□ -2.02
CNOT4O95628 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.44□□□□□ -2.02
CNOT4O95628 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CNOT4O95628 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CNOT4O95628 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.44□□□□□ -2.02
CNOT4O95628 MIR126-201ENST00000362291 85 ntBASIC2.43□□□□□ -2.02
CNOT4O95628 RNU6-1298P-201ENST00000362456 101 ntBASIC2.43□□□□□ -2.02
CNOT4O95628 RNU6-147P-201ENST00000383983 107 ntBASIC2.43□□□□□ -2.02
CNOT4O95628 RNU6-880P-201ENST00000384526 107 ntBASIC2.43□□□□□ -2.02
CNOT4O95628 RNU6-160P-201ENST00000384591 107 ntBASIC2.43□□□□□ -2.02
CNOT4O95628 RNA5SP323-201ENST00000391094 133 ntBASIC2.43□□□□□ -2.02
CNOT4O95628 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.43□□□□□ -2.02
CNOT4O95628 Y_RNA.666-201ENST00000516187 112 ntBASIC2.43□□□□□ -2.02
CNOT4O95628 MIR4679-2-201ENST00000578358 77 ntBASIC2.43□□□□□ -2.02
CNOT4O95628 AL591926.4-201ENST00000616895 298 ntBASIC2.43□□□□□ -2.02
CNOT4O95628 RNU11-3P-201ENST00000391111 133 ntBASIC2.42□□□□□ -2.02
CNOT4O95628 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.42□□□□□ -2.02
CNOT4O95628 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.42□□□□□ -2.02
CNOT4O95628 SNRPGP13-201ENST00000442212 177 ntBASIC2.42□□□□□ -2.02
CNOT4O95628 ATP5J2P3-201ENST00000451550 258 ntBASIC2.42□□□□□ -2.02
CNOT4O95628 RNU1-131P-201ENST00000458943 161 ntBASIC2.42□□□□□ -2.02
CNOT4O95628 Y_RNA.649-201ENST00000459077 103 ntBASIC2.42□□□□□ -2.02
CNOT4O95628 RN7SL636P-201ENST00000497504 294 ntBASIC2.42□□□□□ -2.02
CNOT4O95628 RNU6-693P-201ENST00000516134 107 ntBASIC2.42□□□□□ -2.02
CNOT4O95628 IGLV3-17-201ENST00000519099 244 ntBASIC2.42□□□□□ -2.02
CNOT4O95628 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.42□□□□□ -2.02
CNOT4O95628 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.42□□□□□ -2.02
CNOT4O95628 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CNOT4O95628 MTND5P18-201ENST00000445624 1801 ntBASIC2.41□□□□□ -2.02
CNOT4O95628 SNORA1B-201ENST00000362535 133 ntBASIC2.41□□□□□ -2.02
CNOT4O95628 RNU6-859P-201ENST00000362728 107 ntBASIC2.41□□□□□ -2.02
CNOT4O95628 SNORA33-201ENST00000363664 130 ntBASIC2.41□□□□□ -2.02
CNOT4O95628 SNORD114-6-201ENST00000364393 72 ntBASIC2.41□□□□□ -2.02
CNOT4O95628 SNORA8-201ENST00000384574 139 ntBASIC2.41□□□□□ -2.02
CNOT4O95628 MIR515-2-201ENST00000384883 83 ntBASIC2.41□□□□□ -2.02
CNOT4O95628 MIR515-1-201ENST00000384884 83 ntBASIC2.41□□□□□ -2.02
CNOT4O95628 MIR548A2-201ENST00000384956 97 ntBASIC2.41□□□□□ -2.02
CNOT4O95628 MIR548A1-201ENST00000385041 97 ntBASIC2.41□□□□□ -2.02
CNOT4O95628 RNU7-94P-201ENST00000459576 63 ntBASIC2.41□□□□□ -2.02
CNOT4O95628 AC003982.1-202ENST00000469928 248 ntBASIC2.41□□□□□ -2.02
CNOT4O95628 RNA5SP170-201ENST00000517150 101 ntBASIC2.41□□□□□ -2.02
CNOT4O95628 IGKV1-22-201ENST00000524313 326 ntBASIC2.41□□□□□ -2.02
CNOT4O95628 AP002004.2-201ENST00000531656 154 ntBASIC2.41□□□□□ -2.02
CNOT4O95628 AC004486.1-201ENST00000546846 233 ntBASIC2.41□□□□□ -2.02
CNOT4O95628 AC022217.4-201ENST00000604389 163 ntBASIC2.41□□□□□ -2.02
CNOT4O95628 RNU1-58P-201ENST00000362413 163 ntBASIC2.4□□□□□ -2.03
CNOT4O95628 Y_RNA.43-201ENST00000362670 111 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms