Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 Y_RNA.61-201ENST00000362835 102 ntBASIC1.27□□□□□ -2.21
MBD4O95243 Y_RNA.222-201ENST00000364264 102 ntBASIC1.27□□□□□ -2.21
MBD4O95243 Y_RNA.286-201ENST00000364813 102 ntBASIC1.27□□□□□ -2.21
MBD4O95243 AC063976.4-201ENST00000421971 163 ntBASIC1.27□□□□□ -2.21
MBD4O95243 AC245047.8-201ENST00000456455 284 ntBASIC1.27□□□□□ -2.21
MBD4O95243 AC010655.3-201ENST00000478818 450 ntBASIC1.27□□□□□ -2.21
MBD4O95243 RN7SKP179-201ENST00000516126 217 ntBASIC1.27□□□□□ -2.21
MBD4O95243 SNORA74.3-201ENST00000517108 154 ntBASIC1.27□□□□□ -2.21
MBD4O95243 SNORD114-21-201ENST00000606412 72 ntBASIC1.27□□□□□ -2.21
MBD4O95243 AC134503.1-201ENST00000633048 54 ntBASIC1.27□□□□□ -2.21
MBD4O95243 RNU4-90P-201ENST00000362773 141 ntBASIC1.26□□□□□ -2.21
MBD4O95243 Y_RNA.389-201ENST00000383924 113 ntBASIC1.26□□□□□ -2.21
MBD4O95243 SNORA72.4-201ENST00000384174 132 ntBASIC1.26□□□□□ -2.21
MBD4O95243 RNU6-474P-201ENST00000384243 107 ntBASIC1.26□□□□□ -2.21
MBD4O95243 Y_RNA.535-201ENST00000384612 99 ntBASIC1.26□□□□□ -2.21
MBD4O95243 RNU6-437P-201ENST00000459408 95 ntBASIC1.26□□□□□ -2.21
MBD4O95243 RNU6-397P-201ENST00000516226 104 ntBASIC1.26□□□□□ -2.21
MBD4O95243 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.26□□□□□ -2.21
MBD4O95243 AL391903.3-201ENST00000612158 163 ntBASIC1.26□□□□□ -2.21
MBD4O95243 MIR6767-201ENST00000637302 66 ntBASIC1.26□□□□□ -2.21
MBD4O95243 AL442644.1-201ENST00000454390 3105 ntBASIC1.25□□□□□ -2.21
MBD4O95243 Y_RNA.136-201ENST00000363444 102 ntBASIC1.25□□□□□ -2.21
MBD4O95243 SNORA25.9-201ENST00000365087 128 ntBASIC1.25□□□□□ -2.21
MBD4O95243 Y_RNA.380-201ENST00000365663 111 ntBASIC1.25□□□□□ -2.21
MBD4O95243 SNORD115-46-201ENST00000390982 71 ntBASIC1.25□□□□□ -2.21
MBD4O95243 Y_RNA.604-201ENST00000410574 102 ntBASIC1.25□□□□□ -2.21
MBD4O95243 RNU7-141P-201ENST00000459304 62 ntBASIC1.25□□□□□ -2.21
MBD4O95243 RNU6-897P-201ENST00000517135 105 ntBASIC1.25□□□□□ -2.21
MBD4O95243 AC104695.3-201ENST00000604052 296 ntBASIC1.25□□□□□ -2.21
MBD4O95243 RAC1P9-201ENST00000604990 392 ntBASIC1.25□□□□□ -2.21
MBD4O95243 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
MBD4O95243 AL391516.1-201ENST00000554380 2449 ntBASIC1.24□□□□□ -2.21
MBD4O95243 RNU6-674P-201ENST00000363831 107 ntBASIC1.24□□□□□ -2.21
MBD4O95243 Y_RNA.242-201ENST00000364473 110 ntBASIC1.24□□□□□ -2.21
MBD4O95243 RNU6-450P-201ENST00000364654 107 ntBASIC1.24□□□□□ -2.21
MBD4O95243 Y_RNA.363-201ENST00000365529 113 ntBASIC1.24□□□□□ -2.21
MBD4O95243 Y_RNA.394-201ENST00000383942 103 ntBASIC1.24□□□□□ -2.21
MBD4O95243 SNORD38C-201ENST00000384381 69 ntBASIC1.24□□□□□ -2.21
MBD4O95243 MIR802-201ENST00000390235 94 ntBASIC1.24□□□□□ -2.21
MBD4O95243 SNORA36B-201ENST00000410438 131 ntBASIC1.24□□□□□ -2.21
MBD4O95243 Y_RNA.602-201ENST00000410535 92 ntBASIC1.24□□□□□ -2.21
MBD4O95243 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.24□□□□□ -2.21
MBD4O95243 MTND4LP30-201ENST00000454092 297 ntBASIC1.24□□□□□ -2.21
MBD4O95243 RNU6-496P-201ENST00000516145 99 ntBASIC1.24□□□□□ -2.21
MBD4O95243 RNU6-191P-201ENST00000516295 94 ntBASIC1.24□□□□□ -2.21
MBD4O95243 RNU7-43P-201ENST00000516554 64 ntBASIC1.24□□□□□ -2.21
MBD4O95243 RNU6-1007P-201ENST00000516586 107 ntBASIC1.24□□□□□ -2.21
MBD4O95243 MTND4P29-201ENST00000503122 1372 ntBASIC1.23□□□□□ -2.21
MBD4O95243 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.23□□□□□ -2.21
MBD4O95243 RNU6-1209P-201ENST00000363655 107 ntBASIC1.23□□□□□ -2.21
MBD4O95243 Y_RNA.796-201ENST00000364268 102 ntBASIC1.23□□□□□ -2.21
MBD4O95243 Y_RNA.226-201ENST00000364337 114 ntBASIC1.23□□□□□ -2.21
MBD4O95243 Y_RNA.799-201ENST00000364992 102 ntBASIC1.23□□□□□ -2.21
MBD4O95243 RNU6-442P-201ENST00000383968 104 ntBASIC1.23□□□□□ -2.21
MBD4O95243 MIR520C-201ENST00000385005 87 ntBASIC1.23□□□□□ -2.21
MBD4O95243 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.23□□□□□ -2.21
MBD4O95243 PRELID3BP2-201ENST00000605362 201 ntBASIC1.23□□□□□ -2.21
MBD4O95243 RNU6-801P-201ENST00000364087 105 ntBASIC1.22□□□□□ -2.21
MBD4O95243 Y_RNA.418-201ENST00000384029 102 ntBASIC1.22□□□□□ -2.21
MBD4O95243 MIR499A-201ENST00000384903 122 ntBASIC1.22□□□□□ -2.21
MBD4O95243 MIR548P-201ENST00000408336 84 ntBASIC1.22□□□□□ -2.21
MBD4O95243 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.22□□□□□ -2.21
MBD4O95243 AC002429.1-201ENST00000437672 148 ntBASIC1.22□□□□□ -2.21
MBD4O95243 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.22□□□□□ -2.21
MBD4O95243 HSPE1P25-201ENST00000455484 251 ntBASIC1.22□□□□□ -2.21
MBD4O95243 OR2A41P-201ENST00000473586 105 ntBASIC1.22□□□□□ -2.21
MBD4O95243 SNORA40.15-201ENST00000516884 107 ntBASIC1.22□□□□□ -2.21
MBD4O95243 SNORA18.7-201ENST00000516910 131 ntBASIC1.22□□□□□ -2.21
MBD4O95243 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.22□□□□□ -2.21
MBD4O95243 MIR3192-201ENST00000584920 77 ntBASIC1.22□□□□□ -2.21
MBD4O95243 AC012676.2-201ENST00000619258 186 ntBASIC1.22□□□□□ -2.21
MBD4O95243 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
MBD4O95243 RNA5SP48-201ENST00000363969 126 ntBASIC1.21□□□□□ -2.22
MBD4O95243 RNU4-38P-201ENST00000364472 129 ntBASIC1.21□□□□□ -2.22
MBD4O95243 Y_RNA.569-201ENST00000384749 103 ntBASIC1.21□□□□□ -2.22
MBD4O95243 Y_RNA.581-201ENST00000391017 97 ntBASIC1.21□□□□□ -2.22
MBD4O95243 RNA5SP247-201ENST00000411181 105 ntBASIC1.21□□□□□ -2.22
MBD4O95243 SNORD123-201ENST00000459473 70 ntBASIC1.21□□□□□ -2.22
MBD4O95243 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.21□□□□□ -2.22
MBD4O95243 MIR4764-201ENST00000580680 88 ntBASIC1.21□□□□□ -2.22
MBD4O95243 AC005357.1-201ENST00000588399 301 ntBASIC1.21□□□□□ -2.22
MBD4O95243 HSPE1P19-201ENST00000603327 295 ntBASIC1.21□□□□□ -2.22
MBD4O95243 MIR6504-201ENST00000613520 61 ntBASIC1.21□□□□□ -2.22
MBD4O95243 RNU6-899P-201ENST00000363947 107 ntBASIC1.2□□□□□ -2.22
MBD4O95243 RNU6-1048P-201ENST00000364054 107 ntBASIC1.2□□□□□ -2.22
MBD4O95243 RNU1-93P-201ENST00000364704 169 ntBASIC1.2□□□□□ -2.22
MBD4O95243 SNORD114-22-201ENST00000365423 72 ntBASIC1.2□□□□□ -2.22
MBD4O95243 RNU6-102P-201ENST00000384485 104 ntBASIC1.2□□□□□ -2.22
MBD4O95243 RNU2-14P-201ENST00000411053 191 ntBASIC1.2□□□□□ -2.22
MBD4O95243 MTCO2P12-201ENST00000427426 682 ntBASIC1.2□□□□□ -2.22
MBD4O95243 RNU7-90P-201ENST00000459216 62 ntBASIC1.2□□□□□ -2.22
MBD4O95243 RNU7-21P-201ENST00000459430 62 ntBASIC1.2□□□□□ -2.22
MBD4O95243 Y_RNA.711-201ENST00000516993 102 ntBASIC1.2□□□□□ -2.22
MBD4O95243 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.2□□□□□ -2.22
MBD4O95243 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.2□□□□□ -2.22
MBD4O95243 RNA5SP264-201ENST00000363115 107 ntBASIC1.19□□□□□ -2.22
MBD4O95243 Y_RNA.158-201ENST00000363651 101 ntBASIC1.19□□□□□ -2.22
MBD4O95243 SNORA22B-201ENST00000383876 138 ntBASIC1.19□□□□□ -2.22
MBD4O95243 MIR200A-201ENST00000384875 90 ntBASIC1.19□□□□□ -2.22
MBD4O95243 SNORA26.5-201ENST00000391215 123 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 223 ms