Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 RNU6-704P-201ENST00000364162 103 ntBASIC1.96□□□□□ -2.1
CNOT3O75175 Y_RNA.215-201ENST00000364204 112 ntBASIC1.96□□□□□ -2.1
CNOT3O75175 Y_RNA.796-201ENST00000364268 102 ntBASIC1.96□□□□□ -2.1
CNOT3O75175 Y_RNA.799-201ENST00000364992 102 ntBASIC1.96□□□□□ -2.1
CNOT3O75175 Y_RNA.432-201ENST00000384087 111 ntBASIC1.96□□□□□ -2.1
CNOT3O75175 Y_RNA.497-201ENST00000384447 98 ntBASIC1.96□□□□□ -2.1
CNOT3O75175 MIR513C-201ENST00000401352 84 ntBASIC1.96□□□□□ -2.1
CNOT3O75175 BX510359.4-201ENST00000423750 193 ntBASIC1.96□□□□□ -2.1
CNOT3O75175 CST2P1-201ENST00000425770 87 ntBASIC1.96□□□□□ -2.1
CNOT3O75175 RNU6-1299P-201ENST00000516316 100 ntBASIC1.96□□□□□ -2.1
CNOT3O75175 MIR3169-201ENST00000578032 83 ntBASIC1.96□□□□□ -2.1
CNOT3O75175 MIR5002-201ENST00000584713 97 ntBASIC1.96□□□□□ -2.1
CNOT3O75175 AC078899.2-201ENST00000595282 212 ntBASIC1.96□□□□□ -2.1
CNOT3O75175 uc_338.4-201ENST00000616635 176 ntBASIC1.96□□□□□ -2.1
CNOT3O75175 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CNOT3O75175 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CNOT3O75175 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
CNOT3O75175 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
CNOT3O75175 RNA5SP160-201ENST00000364866 120 ntBASIC1.95□□□□□ -2.1
CNOT3O75175 MIR515-2-201ENST00000384883 83 ntBASIC1.95□□□□□ -2.1
CNOT3O75175 MIR515-1-201ENST00000384884 83 ntBASIC1.95□□□□□ -2.1
CNOT3O75175 MIR29C-201ENST00000385231 88 ntBASIC1.95□□□□□ -2.1
CNOT3O75175 AL117342.1-201ENST00000404861 406 ntBASIC1.95□□□□□ -2.1
CNOT3O75175 SNRPGP8-201ENST00000454064 226 ntBASIC1.95□□□□□ -2.1
CNOT3O75175 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.95□□□□□ -2.1
CNOT3O75175 RNA5SP233-201ENST00000459153 113 ntBASIC1.95□□□□□ -2.1
CNOT3O75175 AL163195.1-201ENST00000496941 348 ntBASIC1.95□□□□□ -2.1
CNOT3O75175 RNA5SP272-201ENST00000516095 111 ntBASIC1.95□□□□□ -2.1
CNOT3O75175 RNU6-426P-201ENST00000516464 97 ntBASIC1.95□□□□□ -2.1
CNOT3O75175 RNU2-56P-201ENST00000516826 190 ntBASIC1.95□□□□□ -2.1
CNOT3O75175 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.95□□□□□ -2.1
CNOT3O75175 Y_RNA.783-201ENST00000613546 102 ntBASIC1.95□□□□□ -2.1
CNOT3O75175 U6.108-201ENST00000637764 58 ntBASIC1.95□□□□□ -2.1
CNOT3O75175 ZNF702P-202ENST00000434269 1966 ntBASIC1.95□□□□□ -2.1
CNOT3O75175 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CNOT3O75175 RNU1-58P-201ENST00000362413 163 ntBASIC1.94□□□□□ -2.1
CNOT3O75175 MIR597-201ENST00000384968 97 ntBASIC1.94□□□□□ -2.1
CNOT3O75175 SNORA12.1-201ENST00000390873 148 ntBASIC1.94□□□□□ -2.1
CNOT3O75175 RNU11-3P-201ENST00000391111 133 ntBASIC1.94□□□□□ -2.1
CNOT3O75175 RNU6-131P-201ENST00000391144 107 ntBASIC1.94□□□□□ -2.1
CNOT3O75175 RNU2-70P-201ENST00000410718 179 ntBASIC1.94□□□□□ -2.1
CNOT3O75175 CYCSP49-201ENST00000420810 319 ntBASIC1.94□□□□□ -2.1
CNOT3O75175 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.94□□□□□ -2.1
CNOT3O75175 AL606753.1-201ENST00000427435 87 ntBASIC1.94□□□□□ -2.1
CNOT3O75175 SNRPGP10-201ENST00000432323 225 ntBASIC1.94□□□□□ -2.1
CNOT3O75175 AL591806.2-201ENST00000433122 173 ntBASIC1.94□□□□□ -2.1
CNOT3O75175 AC099677.2-201ENST00000436385 175 ntBASIC1.94□□□□□ -2.1
CNOT3O75175 RPS27P1-201ENST00000450552 247 ntBASIC1.94□□□□□ -2.1
CNOT3O75175 RNU7-94P-201ENST00000459576 63 ntBASIC1.94□□□□□ -2.1
CNOT3O75175 HMGN1P7-201ENST00000491722 313 ntBASIC1.94□□□□□ -2.1
CNOT3O75175 RNU7-121P-201ENST00000516604 62 ntBASIC1.94□□□□□ -2.1
CNOT3O75175 RNU6-341P-201ENST00000516973 96 ntBASIC1.94□□□□□ -2.1
CNOT3O75175 MIR548X2-201ENST00000579776 100 ntBASIC1.94□□□□□ -2.1
CNOT3O75175 AC091178.2-201ENST00000584401 117 ntBASIC1.94□□□□□ -2.1
CNOT3O75175 AC022217.4-201ENST00000604389 163 ntBASIC1.94□□□□□ -2.1
CNOT3O75175 AL021707.8-201ENST00000609428 183 ntBASIC1.94□□□□□ -2.1
CNOT3O75175 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.94□□□□□ -2.1
CNOT3O75175 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.94□□□□□ -2.1
CNOT3O75175 MIR6844-201ENST00000637122 62 ntBASIC1.94□□□□□ -2.1
CNOT3O75175 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CNOT3O75175 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
CNOT3O75175 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CNOT3O75175 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CNOT3O75175 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CNOT3O75175 Y_RNA.253-201ENST00000364562 112 ntBASIC1.93□□□□□ -2.1
CNOT3O75175 RNU6-768P-201ENST00000384683 107 ntBASIC1.93□□□□□ -2.1
CNOT3O75175 SNORD11-201ENST00000459124 84 ntBASIC1.93□□□□□ -2.1
CNOT3O75175 RNU7-149P-201ENST00000516739 59 ntBASIC1.93□□□□□ -2.1
CNOT3O75175 AC024995.1-201ENST00000523014 93 ntBASIC1.93□□□□□ -2.1
CNOT3O75175 MIR4524B-201ENST00000581569 115 ntBASIC1.93□□□□□ -2.1
CNOT3O75175 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.93□□□□□ -2.1
CNOT3O75175 Pinc.1-201ENST00000616452 154 ntBASIC1.93□□□□□ -2.1
CNOT3O75175 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
CNOT3O75175 MIR126-201ENST00000362291 85 ntBASIC1.92□□□□□ -2.1
CNOT3O75175 SNORA1B-201ENST00000362535 133 ntBASIC1.92□□□□□ -2.1
CNOT3O75175 SNORA20-201ENST00000384662 132 ntBASIC1.92□□□□□ -2.1
CNOT3O75175 MIR562-201ENST00000384894 95 ntBASIC1.92□□□□□ -2.1
CNOT3O75175 RNU4-43P-201ENST00000410628 137 ntBASIC1.92□□□□□ -2.1
CNOT3O75175 RPL30P13-201ENST00000418873 348 ntBASIC1.92□□□□□ -2.1
CNOT3O75175 snoU13.23-201ENST00000458863 104 ntBASIC1.92□□□□□ -2.1
CNOT3O75175 AL049830.1-201ENST00000468034 425 ntBASIC1.92□□□□□ -2.1
CNOT3O75175 AC055731.1-201ENST00000474387 401 ntBASIC1.92□□□□□ -2.1
CNOT3O75175 OR9P1P-201ENST00000496431 281 ntBASIC1.92□□□□□ -2.1
CNOT3O75175 SNORD77.4-201ENST00000516158 81 ntBASIC1.92□□□□□ -2.1
CNOT3O75175 RNU6-197P-201ENST00000516680 100 ntBASIC1.92□□□□□ -2.1
CNOT3O75175 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.92□□□□□ -2.1
CNOT3O75175 AP002004.2-201ENST00000531656 154 ntBASIC1.92□□□□□ -2.1
CNOT3O75175 AC112693.2-201ENST00000556538 232 ntBASIC1.92□□□□□ -2.1
CNOT3O75175 MIR3122-201ENST00000577243 73 ntBASIC1.92□□□□□ -2.1
CNOT3O75175 MIR5094-201ENST00000578766 85 ntBASIC1.92□□□□□ -2.1
CNOT3O75175 MIR378D2-201ENST00000580636 98 ntBASIC1.92□□□□□ -2.1
CNOT3O75175 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.92□□□□□ -2.1
CNOT3O75175 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.92□□□□□ -2.1
CNOT3O75175 SNORD68-201ENST00000363214 84 ntBASIC1.91□□□□□ -2.1
CNOT3O75175 SNORD50.2-201ENST00000365465 70 ntBASIC1.91□□□□□ -2.1
CNOT3O75175 MIR569-201ENST00000385228 96 ntBASIC1.91□□□□□ -2.1
CNOT3O75175 MIR802-201ENST00000390235 94 ntBASIC1.91□□□□□ -2.1
CNOT3O75175 U8.13-201ENST00000390842 128 ntBASIC1.91□□□□□ -2.1
CNOT3O75175 AC245047.3-201ENST00000429428 127 ntBASIC1.91□□□□□ -2.1
CNOT3O75175 RPS26P45-201ENST00000471748 340 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 226.1 ms