Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 Y_RNA.253-201ENST00000364562 112 ntBASIC3.36□□□□□ -1.87
PTCD1O75127 RNU6-1138P-201ENST00000365359 106 ntBASIC3.36□□□□□ -1.87
PTCD1O75127 SNORA8-201ENST00000384574 139 ntBASIC3.36□□□□□ -1.87
PTCD1O75127 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.36□□□□□ -1.87
PTCD1O75127 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.36□□□□□ -1.87
PTCD1O75127 RNU7-170P-201ENST00000459303 61 ntBASIC3.36□□□□□ -1.87
PTCD1O75127 RPS27P29-201ENST00000463110 252 ntBASIC3.36□□□□□ -1.87
PTCD1O75127 AC006483.1-201ENST00000487308 313 ntBASIC3.36□□□□□ -1.87
PTCD1O75127 COX6CP6-201ENST00000490840 228 ntBASIC3.36□□□□□ -1.87
PTCD1O75127 RNA5SP282-201ENST00000516355 108 ntBASIC3.36□□□□□ -1.87
PTCD1O75127 MALAT1.1-201ENST00000618249 95 ntBASIC3.36□□□□□ -1.87
PTCD1O75127 AC134878.1-201ENST00000619901 243 ntBASIC3.36□□□□□ -1.87
PTCD1O75127 MIR376A2-201ENST00000636782 80 ntBASIC3.36□□□□□ -1.87
PTCD1O75127 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.36□□□□□ -1.87
PTCD1O75127 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PTCD1O75127 AC018630.2-201ENST00000534866 2403 ntBASIC3.35□□□□□ -1.87
PTCD1O75127 U8.2-201ENST00000363156 134 ntBASIC3.35□□□□□ -1.87
PTCD1O75127 Y_RNA.362-201ENST00000365518 110 ntBASIC3.35□□□□□ -1.87
PTCD1O75127 MIR627-201ENST00000384979 97 ntBASIC3.35□□□□□ -1.87
PTCD1O75127 MIR450A2-201ENST00000385022 100 ntBASIC3.35□□□□□ -1.87
PTCD1O75127 AL117342.1-201ENST00000404861 406 ntBASIC3.35□□□□□ -1.87
PTCD1O75127 MTATP8P2-201ENST00000435212 202 ntBASIC3.35□□□□□ -1.87
PTCD1O75127 NDUFA4P2-201ENST00000489989 244 ntBASIC3.35□□□□□ -1.87
PTCD1O75127 RNU6-126P-201ENST00000516685 103 ntBASIC3.35□□□□□ -1.87
PTCD1O75127 MIR3605-201ENST00000583214 100 ntBASIC3.35□□□□□ -1.87
PTCD1O75127 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.35□□□□□ -1.87
PTCD1O75127 AL353149.1-201ENST00000610667 244 ntBASIC3.35□□□□□ -1.87
PTCD1O75127 AL137067.1-201ENST00000615933 120 ntBASIC3.35□□□□□ -1.87
PTCD1O75127 CTSLP2-204ENST00000629029 392 ntBASIC3.35□□□□□ -1.87
PTCD1O75127 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
PTCD1O75127 SNORD115-3-201ENST00000363100 82 ntBASIC3.34□□□□□ -1.87
PTCD1O75127 Y_RNA.220-201ENST00000364244 109 ntBASIC3.34□□□□□ -1.87
PTCD1O75127 MIR181B1-201ENST00000385240 110 ntBASIC3.34□□□□□ -1.87
PTCD1O75127 RNA5SP136-201ENST00000410906 107 ntBASIC3.34□□□□□ -1.87
PTCD1O75127 AC109327.2-201ENST00000448339 378 ntBASIC3.34□□□□□ -1.87
PTCD1O75127 RNU1-131P-201ENST00000458943 161 ntBASIC3.34□□□□□ -1.87
PTCD1O75127 RN7SL636P-201ENST00000497504 294 ntBASIC3.34□□□□□ -1.87
PTCD1O75127 RNU6-65P-201ENST00000516332 98 ntBASIC3.34□□□□□ -1.87
PTCD1O75127 RNU6-830P-201ENST00000516353 107 ntBASIC3.34□□□□□ -1.87
PTCD1O75127 RNU6-1149P-201ENST00000516810 97 ntBASIC3.34□□□□□ -1.87
PTCD1O75127 SCARNA15-202ENST00000516881 127 ntBASIC3.34□□□□□ -1.87
PTCD1O75127 RNU6-341P-201ENST00000516973 96 ntBASIC3.34□□□□□ -1.87
PTCD1O75127 AC025521.1-201ENST00000621624 286 ntBASIC3.34□□□□□ -1.87
PTCD1O75127 U6.108-201ENST00000637764 58 ntBASIC3.34□□□□□ -1.87
PTCD1O75127 ZNF271P-202ENST00000465539 1970 ntBASIC3.34□□□□□ -1.88
PTCD1O75127 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PTCD1O75127 ZNF658B-202ENST00000615961 3375 ntBASIC3.33□□□□□ -1.88
PTCD1O75127 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.33□□□□□ -1.88
PTCD1O75127 Y_RNA.219-201ENST00000364232 113 ntBASIC3.33□□□□□ -1.88
PTCD1O75127 Y_RNA.342-201ENST00000365352 113 ntBASIC3.33□□□□□ -1.88
PTCD1O75127 Y_RNA.466-201ENST00000384294 113 ntBASIC3.33□□□□□ -1.88
PTCD1O75127 MTATP6P21-201ENST00000440681 189 ntBASIC3.33□□□□□ -1.88
PTCD1O75127 MRPS17P9-201ENST00000511924 393 ntBASIC3.33□□□□□ -1.88
PTCD1O75127 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.33□□□□□ -1.88
PTCD1O75127 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.33□□□□□ -1.88
PTCD1O75127 AC022217.4-201ENST00000604389 163 ntBASIC3.33□□□□□ -1.88
PTCD1O75127 SNORD115-40-201ENST00000606510 82 ntBASIC3.33□□□□□ -1.88
PTCD1O75127 U4atac.1-201ENST00000618345 95 ntBASIC3.33□□□□□ -1.88
PTCD1O75127 Y_RNA.107-201ENST00000363190 121 ntBASIC3.32□□□□□ -1.88
PTCD1O75127 RNU6-820P-201ENST00000384273 107 ntBASIC3.32□□□□□ -1.88
PTCD1O75127 MIR27B-201ENST00000385129 97 ntBASIC3.32□□□□□ -1.88
PTCD1O75127 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.32□□□□□ -1.88
PTCD1O75127 Y_RNA.593-201ENST00000410292 98 ntBASIC3.32□□□□□ -1.88
PTCD1O75127 Z98742.3-201ENST00000418637 326 ntBASIC3.32□□□□□ -1.88
PTCD1O75127 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.32□□□□□ -1.88
PTCD1O75127 AC018634.1-201ENST00000437554 401 ntBASIC3.32□□□□□ -1.88
PTCD1O75127 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.32□□□□□ -1.88
PTCD1O75127 AC007536.1-201ENST00000533382 349 ntBASIC3.32□□□□□ -1.88
PTCD1O75127 AL449363.1-201ENST00000617815 186 ntBASIC3.32□□□□□ -1.88
PTCD1O75127 MAPK10-362ENST00000641864 4484 ntBASIC3.32□□□□□ -1.88
PTCD1O75127 AL589743.1-201ENST00000551932 2712 ntBASIC3.32□□□□□ -1.88
PTCD1O75127 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTCD1O75127 AL161431.1-201ENST00000618966 4205 ntBASIC3.32□□□□□ -1.88
PTCD1O75127 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PTCD1O75127 MIR126-201ENST00000362291 85 ntBASIC3.31□□□□□ -1.88
PTCD1O75127 RNU6-862P-201ENST00000362804 105 ntBASIC3.31□□□□□ -1.88
PTCD1O75127 SNORD61-201ENST00000384252 73 ntBASIC3.31□□□□□ -1.88
PTCD1O75127 AC007064.1-201ENST00000412238 351 ntBASIC3.31□□□□□ -1.88
PTCD1O75127 RPS3AP1-201ENST00000413190 320 ntBASIC3.31□□□□□ -1.88
PTCD1O75127 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.31□□□□□ -1.88
PTCD1O75127 AC104389.3-201ENST00000445629 235 ntBASIC3.31□□□□□ -1.88
PTCD1O75127 RNU6-240P-201ENST00000516098 97 ntBASIC3.31□□□□□ -1.88
PTCD1O75127 RNA5SP395-201ENST00000516567 118 ntBASIC3.31□□□□□ -1.88
PTCD1O75127 RNU6-504P-201ENST00000516568 104 ntBASIC3.31□□□□□ -1.88
PTCD1O75127 RNU6-1270P-201ENST00000517128 108 ntBASIC3.31□□□□□ -1.88
PTCD1O75127 MIR5009-201ENST00000578736 100 ntBASIC3.31□□□□□ -1.88
PTCD1O75127 SNORA50A-202ENST00000629536 136 ntBASIC3.31□□□□□ -1.88
PTCD1O75127 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.31□□□□□ -1.88
PTCD1O75127 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTCD1O75127 Y_RNA.49-201ENST00000362714 112 ntBASIC3.3□□□□□ -1.88
PTCD1O75127 RNU6-1113P-201ENST00000384348 107 ntBASIC3.3□□□□□ -1.88
PTCD1O75127 MIR515-2-201ENST00000384883 83 ntBASIC3.3□□□□□ -1.88
PTCD1O75127 MIR515-1-201ENST00000384884 83 ntBASIC3.3□□□□□ -1.88
PTCD1O75127 MIR548A2-201ENST00000384956 97 ntBASIC3.3□□□□□ -1.88
PTCD1O75127 Z96811.1-201ENST00000445880 108 ntBASIC3.3□□□□□ -1.88
PTCD1O75127 RNA5SP57-201ENST00000459463 123 ntBASIC3.3□□□□□ -1.88
PTCD1O75127 AL163195.1-201ENST00000496941 348 ntBASIC3.3□□□□□ -1.88
PTCD1O75127 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.3□□□□□ -1.88
PTCD1O75127 AC026421.1-201ENST00000519101 163 ntBASIC3.3□□□□□ -1.88
PTCD1O75127 AC141557.1-201ENST00000540982 400 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms