Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.64□□□□□ -2.15
CACNA1FO60840 AC023790.1-201ENST00000482174 347 ntBASIC1.64□□□□□ -2.15
CACNA1FO60840 AC117454.1-201ENST00000491120 168 ntBASIC1.64□□□□□ -2.15
CACNA1FO60840 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.64□□□□□ -2.15
CACNA1FO60840 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.64□□□□□ -2.15
CACNA1FO60840 Pinc.1-201ENST00000616452 154 ntBASIC1.64□□□□□ -2.15
CACNA1FO60840 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.64□□□□□ -2.15
CACNA1FO60840 Y_RNA.272-201ENST00000364696 102 ntBASIC1.63□□□□□ -2.15
CACNA1FO60840 RNU6-1264P-201ENST00000383891 107 ntBASIC1.63□□□□□ -2.15
CACNA1FO60840 SNORA20B-201ENST00000384220 132 ntBASIC1.63□□□□□ -2.15
CACNA1FO60840 RNU6-417P-201ENST00000384712 107 ntBASIC1.63□□□□□ -2.15
CACNA1FO60840 RNU4-61P-201ENST00000411243 107 ntBASIC1.63□□□□□ -2.15
CACNA1FO60840 RPL31P63-201ENST00000422565 375 ntBASIC1.63□□□□□ -2.15
CACNA1FO60840 AC245047.8-201ENST00000456455 284 ntBASIC1.63□□□□□ -2.15
CACNA1FO60840 RNU6-948P-201ENST00000516374 107 ntBASIC1.63□□□□□ -2.15
CACNA1FO60840 RNU6-406P-201ENST00000516470 107 ntBASIC1.63□□□□□ -2.15
CACNA1FO60840 RNA5SP137-201ENST00000516833 135 ntBASIC1.63□□□□□ -2.15
CACNA1FO60840 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.63□□□□□ -2.15
CACNA1FO60840 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.63□□□□□ -2.15
CACNA1FO60840 DEFB117-201ENST00000602356 141 ntBASIC1.63□□□□□ -2.15
CACNA1FO60840 AL627230.6-201ENST00000611129 280 ntBASIC1.63□□□□□ -2.15
CACNA1FO60840 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.63□□□□□ -2.15
CACNA1FO60840 RNU6-862P-201ENST00000362804 105 ntBASIC1.63□□□□□ -2.15
CACNA1FO60840 RNU4-84P-201ENST00000364200 139 ntBASIC1.63□□□□□ -2.15
CACNA1FO60840 MIR1253-201ENST00000408273 105 ntBASIC1.63□□□□□ -2.15
CACNA1FO60840 ATP5J2P3-201ENST00000451550 258 ntBASIC1.63□□□□□ -2.15
CACNA1FO60840 AC091021.1-201ENST00000468051 388 ntBASIC1.63□□□□□ -2.15
CACNA1FO60840 SCARNA8-201ENST00000515924 131 ntBASIC1.63□□□□□ -2.15
CACNA1FO60840 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.63□□□□□ -2.15
CACNA1FO60840 MIR3684-201ENST00000579779 74 ntBASIC1.63□□□□□ -2.15
CACNA1FO60840 AC091178.2-201ENST00000584401 117 ntBASIC1.63□□□□□ -2.15
CACNA1FO60840 SNORD14A-201ENST00000606526 91 ntBASIC1.63□□□□□ -2.15
CACNA1FO60840 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CACNA1FO60840 RNU6-743P-201ENST00000364151 106 ntBASIC1.62□□□□□ -2.15
CACNA1FO60840 Y_RNA.293-201ENST00000364908 93 ntBASIC1.62□□□□□ -2.15
CACNA1FO60840 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.62□□□□□ -2.15
CACNA1FO60840 SEPT7P4-201ENST00000437076 306 ntBASIC1.62□□□□□ -2.15
CACNA1FO60840 AC009238.1-201ENST00000442165 424 ntBASIC1.62□□□□□ -2.15
CACNA1FO60840 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.62□□□□□ -2.15
CACNA1FO60840 AC009237.6-201ENST00000446969 424 ntBASIC1.62□□□□□ -2.15
CACNA1FO60840 AC011406.1-201ENST00000512440 370 ntBASIC1.62□□□□□ -2.15
CACNA1FO60840 RNU7-200P-201ENST00000516105 62 ntBASIC1.62□□□□□ -2.15
CACNA1FO60840 RNU1-23P-201ENST00000363361 144 ntBASIC1.61□□□□□ -2.15
CACNA1FO60840 RNU6-818P-201ENST00000364837 108 ntBASIC1.61□□□□□ -2.15
CACNA1FO60840 U8.7-201ENST00000364940 136 ntBASIC1.61□□□□□ -2.15
CACNA1FO60840 Y_RNA.304-201ENST00000365011 112 ntBASIC1.61□□□□□ -2.15
CACNA1FO60840 RNU6-383P-201ENST00000410864 94 ntBASIC1.61□□□□□ -2.15
CACNA1FO60840 CYP2C59P-201ENST00000457790 269 ntBASIC1.61□□□□□ -2.15
CACNA1FO60840 RNU6-1205P-201ENST00000363625 106 ntBASIC1.61□□□□□ -2.15
CACNA1FO60840 RNU6-271P-201ENST00000363858 105 ntBASIC1.61□□□□□ -2.15
CACNA1FO60840 Y_RNA.240-201ENST00000364469 95 ntBASIC1.61□□□□□ -2.15
CACNA1FO60840 SNORD116-18-201ENST00000383961 92 ntBASIC1.61□□□□□ -2.15
CACNA1FO60840 MIR218-1-201ENST00000384999 110 ntBASIC1.61□□□□□ -2.15
CACNA1FO60840 SNORA79-201ENST00000408376 140 ntBASIC1.61□□□□□ -2.15
CACNA1FO60840 SRIP3-201ENST00000413200 219 ntBASIC1.61□□□□□ -2.15
CACNA1FO60840 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.61□□□□□ -2.15
CACNA1FO60840 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.61□□□□□ -2.15
CACNA1FO60840 AL392103.1-201ENST00000447000 198 ntBASIC1.61□□□□□ -2.15
CACNA1FO60840 Y_RNA.797-201ENST00000515977 94 ntBASIC1.61□□□□□ -2.15
CACNA1FO60840 RN7SKP164-201ENST00000516138 266 ntBASIC1.61□□□□□ -2.15
CACNA1FO60840 MIR5688-201ENST00000580619 83 ntBASIC1.61□□□□□ -2.15
CACNA1FO60840 DNAJC19P2-201ENST00000593340 302 ntBASIC1.61□□□□□ -2.15
CACNA1FO60840 AP001485.1-201ENST00000604799 199 ntBASIC1.61□□□□□ -2.15
CACNA1FO60840 MIR548AY-201ENST00000617669 107 ntBASIC1.61□□□□□ -2.15
CACNA1FO60840 AL365265.1-201ENST00000621045 234 ntBASIC1.61□□□□□ -2.15
CACNA1FO60840 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.61□□□□□ -2.15
CACNA1FO60840 RNU6-151P-201ENST00000364158 107 ntBASIC1.6□□□□□ -2.15
CACNA1FO60840 RNU6-484P-201ENST00000384016 107 ntBASIC1.6□□□□□ -2.15
CACNA1FO60840 AL606845.1-201ENST00000404881 255 ntBASIC1.6□□□□□ -2.15
CACNA1FO60840 AL606753.1-201ENST00000427435 87 ntBASIC1.6□□□□□ -2.15
CACNA1FO60840 AC025647.1-201ENST00000517879 253 ntBASIC1.6□□□□□ -2.15
CACNA1FO60840 MIR6504-201ENST00000613520 61 ntBASIC1.6□□□□□ -2.15
CACNA1FO60840 JPX_2.1-201ENST00000614161 69 ntBASIC1.6□□□□□ -2.15
CACNA1FO60840 AC068647.2-201ENST00000637380 353 ntBASIC1.6□□□□□ -2.15
CACNA1FO60840 ZNF702P-202ENST00000434269 1966 ntBASIC1.6□□□□□ -2.15
CACNA1FO60840 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CACNA1FO60840 Y_RNA.182-201ENST00000363880 111 ntBASIC1.59□□□□□ -2.15
CACNA1FO60840 RNU6-117P-201ENST00000365415 107 ntBASIC1.59□□□□□ -2.15
CACNA1FO60840 MIR626-201ENST00000385032 94 ntBASIC1.59□□□□□ -2.15
CACNA1FO60840 RNU6-578P-201ENST00000390980 103 ntBASIC1.59□□□□□ -2.15
CACNA1FO60840 MIR548I2-201ENST00000408348 149 ntBASIC1.59□□□□□ -2.15
CACNA1FO60840 RNA5SP511-201ENST00000410487 115 ntBASIC1.59□□□□□ -2.15
CACNA1FO60840 MTCO1P44-201ENST00000441935 243 ntBASIC1.59□□□□□ -2.15
CACNA1FO60840 RPS4XP11-201ENST00000446897 772 ntBASIC1.59□□□□□ -2.15
CACNA1FO60840 RPS26P55-201ENST00000471178 356 ntBASIC1.59□□□□□ -2.15
CACNA1FO60840 RNU7-193P-201ENST00000516723 65 ntBASIC1.59□□□□□ -2.15
CACNA1FO60840 RNU7-149P-201ENST00000516739 59 ntBASIC1.59□□□□□ -2.15
CACNA1FO60840 SUMO2P18-201ENST00000518873 252 ntBASIC1.59□□□□□ -2.15
CACNA1FO60840 AC011604.1-201ENST00000545978 196 ntBASIC1.59□□□□□ -2.15
CACNA1FO60840 AC112693.2-201ENST00000556538 232 ntBASIC1.59□□□□□ -2.15
CACNA1FO60840 AC127455.1-201ENST00000565496 145 ntBASIC1.59□□□□□ -2.15
CACNA1FO60840 MIR3198-2-201ENST00000577868 80 ntBASIC1.59□□□□□ -2.15
CACNA1FO60840 Y_RNA.802-201ENST00000614892 130 ntBASIC1.59□□□□□ -2.15
CACNA1FO60840 Y_RNA.24-201ENST00000362508 103 ntBASIC1.59□□□□□ -2.16
CACNA1FO60840 Y_RNA.121-201ENST00000363309 113 ntBASIC1.59□□□□□ -2.16
CACNA1FO60840 MIR29C-201ENST00000385231 88 ntBASIC1.59□□□□□ -2.16
CACNA1FO60840 RNU6-381P-201ENST00000391259 108 ntBASIC1.59□□□□□ -2.16
CACNA1FO60840 RNU6-426P-201ENST00000516464 97 ntBASIC1.59□□□□□ -2.16
CACNA1FO60840 RNU2-34P-201ENST00000516534 121 ntBASIC1.59□□□□□ -2.16
CACNA1FO60840 RNU6-1291P-201ENST00000516591 104 ntBASIC1.59□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms