Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RNU6-570P-201ENST00000517051 105 ntBASIC1.15□□□□□ -2.23
SNX3O60493 RNU6-548P-201ENST00000517083 115 ntBASIC1.15□□□□□ -2.23
SNX3O60493 RPL23AP91-201ENST00000569211 455 ntBASIC1.15□□□□□ -2.23
SNX3O60493 MIR2681-201ENST00000581814 105 ntBASIC1.15□□□□□ -2.23
SNX3O60493 AC068700.1-201ENST00000565862 3754 ntBASIC1.15□□□□□ -2.23
SNX3O60493 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SNX3O60493 RNU6-1272P-201ENST00000362776 107 ntBASIC1.14□□□□□ -2.23
SNX3O60493 RNU6-1205P-201ENST00000363625 106 ntBASIC1.14□□□□□ -2.23
SNX3O60493 Y_RNA.512-201ENST00000384518 102 ntBASIC1.14□□□□□ -2.23
SNX3O60493 MIR136-201ENST00000385207 82 ntBASIC1.14□□□□□ -2.23
SNX3O60493 RNU6-1203P-201ENST00000410703 110 ntBASIC1.14□□□□□ -2.23
SNX3O60493 RNU6-1054P-201ENST00000411293 104 ntBASIC1.14□□□□□ -2.23
SNX3O60493 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.14□□□□□ -2.23
SNX3O60493 MTATP8P1-201ENST00000467115 207 ntBASIC1.14□□□□□ -2.23
SNX3O60493 RNU6-1338P-201ENST00000516328 91 ntBASIC1.14□□□□□ -2.23
SNX3O60493 SNORD111.1-201ENST00000516421 86 ntBASIC1.14□□□□□ -2.23
SNX3O60493 SNORA27.4-201ENST00000516650 95 ntBASIC1.14□□□□□ -2.23
SNX3O60493 SCARNA24.2-201ENST00000516968 130 ntBASIC1.14□□□□□ -2.23
SNX3O60493 AC006504.6-201ENST00000590142 199 ntBASIC1.14□□□□□ -2.23
SNX3O60493 AL096861.1-201ENST00000610899 123 ntBASIC1.14□□□□□ -2.23
SNX3O60493 AC013791.1-201ENST00000616619 62 ntBASIC1.14□□□□□ -2.23
SNX3O60493 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.14□□□□□ -2.23
SNX3O60493 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.13□□□□□ -2.23
SNX3O60493 SNORD14E-201ENST00000364009 85 ntBASIC1.13□□□□□ -2.23
SNX3O60493 RNU6-1160P-201ENST00000384546 104 ntBASIC1.13□□□□□ -2.23
SNX3O60493 BTF3P11-201ENST00000426582 477 ntBASIC1.13□□□□□ -2.23
SNX3O60493 RPL39P39-201ENST00000455840 151 ntBASIC1.13□□□□□ -2.23
SNX3O60493 SNORD11-201ENST00000459124 84 ntBASIC1.13□□□□□ -2.23
SNX3O60493 SERF1AP1-201ENST00000514575 187 ntBASIC1.13□□□□□ -2.23
SNX3O60493 Y_RNA.720-201ENST00000517166 92 ntBASIC1.13□□□□□ -2.23
SNX3O60493 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
SNX3O60493 AC007742.2-201ENST00000618226 398 ntBASIC1.13□□□□□ -2.23
SNX3O60493 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.13□□□□□ -2.23
SNX3O60493 SNORA63-201ENST00000363450 132 ntBASIC1.12□□□□□ -2.23
SNX3O60493 Y_RNA.217-201ENST00000364214 105 ntBASIC1.12□□□□□ -2.23
SNX3O60493 RNU6-383P-201ENST00000410864 94 ntBASIC1.12□□□□□ -2.23
SNX3O60493 AC245047.7-201ENST00000440265 293 ntBASIC1.12□□□□□ -2.23
SNX3O60493 snoU13.25-201ENST00000458945 104 ntBASIC1.12□□□□□ -2.23
SNX3O60493 Y_RNA.641-201ENST00000459414 105 ntBASIC1.12□□□□□ -2.23
SNX3O60493 RNU6-635P-201ENST00000516651 102 ntBASIC1.12□□□□□ -2.23
SNX3O60493 SNORA18.7-201ENST00000516910 131 ntBASIC1.12□□□□□ -2.23
SNX3O60493 SNORA74.3-201ENST00000517108 154 ntBASIC1.12□□□□□ -2.23
SNX3O60493 MIR5692C2-201ENST00000577959 77 ntBASIC1.12□□□□□ -2.23
SNX3O60493 MIR3192-201ENST00000584920 77 ntBASIC1.12□□□□□ -2.23
SNX3O60493 AC008507.4-201ENST00000585464 127 ntBASIC1.12□□□□□ -2.23
SNX3O60493 AC087685.1-201ENST00000587507 141 ntBASIC1.12□□□□□ -2.23
SNX3O60493 AL022345.2-201ENST00000606307 135 ntBASIC1.12□□□□□ -2.23
SNX3O60493 Y_RNA.812-201ENST00000610788 101 ntBASIC1.12□□□□□ -2.23
SNX3O60493 Y_RNA.784-201ENST00000613803 101 ntBASIC1.12□□□□□ -2.23
SNX3O60493 Y_RNA.787-201ENST00000616522 101 ntBASIC1.12□□□□□ -2.23
SNX3O60493 Y_RNA.780-201ENST00000617336 101 ntBASIC1.12□□□□□ -2.23
SNX3O60493 Y_RNA.801-201ENST00000619005 101 ntBASIC1.12□□□□□ -2.23
SNX3O60493 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
SNX3O60493 RNU6-144P-201ENST00000383951 107 ntBASIC1.11□□□□□ -2.23
SNX3O60493 SNORA25-201ENST00000384384 134 ntBASIC1.11□□□□□ -2.23
SNX3O60493 MIR606-201ENST00000384851 96 ntBASIC1.11□□□□□ -2.23
SNX3O60493 SNORD72-201ENST00000390994 80 ntBASIC1.11□□□□□ -2.23
SNX3O60493 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.11□□□□□ -2.23
SNX3O60493 DEFB108E-201ENST00000524692 240 ntBASIC1.11□□□□□ -2.23
SNX3O60493 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.11□□□□□ -2.23
SNX3O60493 AC136443.5-201ENST00000603741 370 ntBASIC1.11□□□□□ -2.23
SNX3O60493 AC103810.9-201ENST00000606688 112 ntBASIC1.11□□□□□ -2.23
SNX3O60493 AL008718.3-201ENST00000610217 321 ntBASIC1.11□□□□□ -2.23
SNX3O60493 snoU18.1-201ENST00000629629 71 ntBASIC1.11□□□□□ -2.23
SNX3O60493 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.11□□□□□ -2.23
SNX3O60493 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
SNX3O60493 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.1□□□□□ -2.23
SNX3O60493 RNU6-238P-201ENST00000363313 106 ntBASIC1.1□□□□□ -2.23
SNX3O60493 SNORA63C-201ENST00000364578 129 ntBASIC1.1□□□□□ -2.23
SNX3O60493 SNORA25.8-201ENST00000364831 128 ntBASIC1.1□□□□□ -2.23
SNX3O60493 Y_RNA.363-201ENST00000365529 113 ntBASIC1.1□□□□□ -2.23
SNX3O60493 Y_RNA.376-201ENST00000365638 108 ntBASIC1.1□□□□□ -2.23
SNX3O60493 RNU6-442P-201ENST00000383968 104 ntBASIC1.1□□□□□ -2.23
SNX3O60493 RNU6-1011P-201ENST00000384668 107 ntBASIC1.1□□□□□ -2.23
SNX3O60493 RNU6-910P-201ENST00000390844 107 ntBASIC1.1□□□□□ -2.23
SNX3O60493 AL603910.2-201ENST00000407268 136 ntBASIC1.1□□□□□ -2.23
SNX3O60493 MRPL35P3-201ENST00000421557 364 ntBASIC1.1□□□□□ -2.23
SNX3O60493 SNRPGP14-201ENST00000435400 219 ntBASIC1.1□□□□□ -2.23
SNX3O60493 TRBVB-201ENST00000477100 408 ntBASIC1.1□□□□□ -2.23
SNX3O60493 SNORA31.4-201ENST00000516049 129 ntBASIC1.1□□□□□ -2.23
SNX3O60493 SNORA70.22-201ENST00000517160 124 ntBASIC1.1□□□□□ -2.23
SNX3O60493 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.1□□□□□ -2.23
SNX3O60493 BX284668.6-201ENST00000606899 438 ntBASIC1.1□□□□□ -2.23
SNX3O60493 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
SNX3O60493 AP001282.2-201ENST00000616149 309 ntBASIC1.1□□□□□ -2.23
SNX3O60493 ZNF209P-201ENST00000593450 2304 ntBASIC1.1□□□□□ -2.23
SNX3O60493 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
SNX3O60493 UBE2WP1-201ENST00000362030 340 ntBASIC1.09□□□□□ -2.23
SNX3O60493 RNU1-17P-201ENST00000363022 152 ntBASIC1.09□□□□□ -2.23
SNX3O60493 RNU6-713P-201ENST00000384761 107 ntBASIC1.09□□□□□ -2.23
SNX3O60493 MIR520C-201ENST00000385005 87 ntBASIC1.09□□□□□ -2.23
SNX3O60493 MIR802-201ENST00000390235 94 ntBASIC1.09□□□□□ -2.23
SNX3O60493 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.09□□□□□ -2.23
SNX3O60493 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.09□□□□□ -2.23
SNX3O60493 SNORD123-201ENST00000459473 70 ntBASIC1.09□□□□□ -2.23
SNX3O60493 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.09□□□□□ -2.23
SNX3O60493 AL442663.2-201ENST00000554385 511 ntBASIC1.09□□□□□ -2.23
SNX3O60493 MIR4303-201ENST00000581299 66 ntBASIC1.09□□□□□ -2.23
SNX3O60493 AC027335.2-201ENST00000624030 375 ntBASIC1.09□□□□□ -2.23
SNX3O60493 AL442644.1-201ENST00000454390 3105 ntBASIC1.09□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms