Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 MT-TG-201ENST00000387429 68 ntBASIC2.01□□□□□ -2.09
PRPF3O43395 AC023449.1-201ENST00000454464 154 ntBASIC2.01□□□□□ -2.09
PRPF3O43395 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.01□□□□□ -2.09
PRPF3O43395 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.01□□□□□ -2.09
PRPF3O43395 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.01□□□□□ -2.09
PRPF3O43395 AC006006.1-201ENST00000603082 144 ntBASIC2.01□□□□□ -2.09
PRPF3O43395 ICE2P2-201ENST00000483823 2787 ntBASIC2□□□□□ -2.09
PRPF3O43395 Y_RNA.76-201ENST00000362931 109 ntBASIC2□□□□□ -2.09
PRPF3O43395 RNU4-41P-201ENST00000364426 143 ntBASIC2□□□□□ -2.09
PRPF3O43395 HMGN2P32-201ENST00000444648 269 ntBASIC2□□□□□ -2.09
PRPF3O43395 RNU6-250P-201ENST00000516958 103 ntBASIC2□□□□□ -2.09
PRPF3O43395 MIR3618-201ENST00000580330 88 ntBASIC2□□□□□ -2.09
PRPF3O43395 AP000942.3-201ENST00000603702 160 ntBASIC2□□□□□ -2.09
PRPF3O43395 AL442067.1-201ENST00000613261 223 ntBASIC2□□□□□ -2.09
PRPF3O43395 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
PRPF3O43395 RNU6-833P-201ENST00000363486 107 ntBASIC1.99□□□□□ -2.09
PRPF3O43395 Y_RNA.253-201ENST00000364562 112 ntBASIC1.99□□□□□ -2.09
PRPF3O43395 Y_RNA.269-201ENST00000364685 89 ntBASIC1.99□□□□□ -2.09
PRPF3O43395 RNU6-969P-201ENST00000383900 105 ntBASIC1.99□□□□□ -2.09
PRPF3O43395 RNA5SP496-201ENST00000391240 109 ntBASIC1.99□□□□□ -2.09
PRPF3O43395 SNORD58.1-201ENST00000391313 66 ntBASIC1.99□□□□□ -2.09
PRPF3O43395 CYCSP49-201ENST00000420810 319 ntBASIC1.99□□□□□ -2.09
PRPF3O43395 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.99□□□□□ -2.09
PRPF3O43395 AC245517.4-201ENST00000448601 281 ntBASIC1.99□□□□□ -2.09
PRPF3O43395 AC108729.3-201ENST00000513484 108 ntBASIC1.99□□□□□ -2.09
PRPF3O43395 SNORD116-28-201ENST00000516123 91 ntBASIC1.99□□□□□ -2.09
PRPF3O43395 RNU6-111P-201ENST00000517179 105 ntBASIC1.99□□□□□ -2.09
PRPF3O43395 MIR4255-201ENST00000579351 72 ntBASIC1.99□□□□□ -2.09
PRPF3O43395 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.99□□□□□ -2.09
PRPF3O43395 AL591926.4-201ENST00000616895 298 ntBASIC1.99□□□□□ -2.09
PRPF3O43395 SNORD3E-202ENST00000627253 216 ntBASIC1.99□□□□□ -2.09
PRPF3O43395 AC068700.1-201ENST00000565862 3754 ntBASIC1.99□□□□□ -2.09
PRPF3O43395 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PRPF3O43395 SNORD68-201ENST00000363214 84 ntBASIC1.98□□□□□ -2.09
PRPF3O43395 RNU6-338P-201ENST00000383888 105 ntBASIC1.98□□□□□ -2.09
PRPF3O43395 SNORA12.1-201ENST00000390873 148 ntBASIC1.98□□□□□ -2.09
PRPF3O43395 RNU6-131P-201ENST00000391144 107 ntBASIC1.98□□□□□ -2.09
PRPF3O43395 RNU1-78P-201ENST00000391248 165 ntBASIC1.98□□□□□ -2.09
PRPF3O43395 Z98949.2-201ENST00000440996 144 ntBASIC1.98□□□□□ -2.09
PRPF3O43395 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.98□□□□□ -2.09
PRPF3O43395 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.98□□□□□ -2.09
PRPF3O43395 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.98□□□□□ -2.09
PRPF3O43395 AC015688.6-201ENST00000577737 104 ntBASIC1.98□□□□□ -2.09
PRPF3O43395 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
PRPF3O43395 MIR126-201ENST00000362291 85 ntBASIC1.97□□□□□ -2.09
PRPF3O43395 MIR367-201ENST00000362299 68 ntBASIC1.97□□□□□ -2.09
PRPF3O43395 Y_RNA.140-201ENST00000363474 103 ntBASIC1.97□□□□□ -2.09
PRPF3O43395 Y_RNA.292-201ENST00000364904 97 ntBASIC1.97□□□□□ -2.09
PRPF3O43395 Y_RNA.304-201ENST00000365011 112 ntBASIC1.97□□□□□ -2.09
PRPF3O43395 RNU6-203P-201ENST00000384038 104 ntBASIC1.97□□□□□ -2.09
PRPF3O43395 Y_RNA.476-201ENST00000384347 108 ntBASIC1.97□□□□□ -2.09
PRPF3O43395 RNU6-1065P-201ENST00000384513 106 ntBASIC1.97□□□□□ -2.09
PRPF3O43395 MIR513A1-201ENST00000385138 129 ntBASIC1.97□□□□□ -2.09
PRPF3O43395 MIR526A2-201ENST00000390198 65 ntBASIC1.97□□□□□ -2.09
PRPF3O43395 SNRPGP10-201ENST00000432323 225 ntBASIC1.97□□□□□ -2.09
PRPF3O43395 HSPE1P24-201ENST00000450782 238 ntBASIC1.97□□□□□ -2.09
PRPF3O43395 RNU4-71P-201ENST00000516258 113 ntBASIC1.97□□□□□ -2.09
PRPF3O43395 RNA5SP168-201ENST00000516642 112 ntBASIC1.97□□□□□ -2.09
PRPF3O43395 RNU6-126P-201ENST00000516685 103 ntBASIC1.97□□□□□ -2.09
PRPF3O43395 AC120024.3-201ENST00000603167 156 ntBASIC1.97□□□□□ -2.09
PRPF3O43395 Y_RNA.802-201ENST00000614892 130 ntBASIC1.97□□□□□ -2.09
PRPF3O43395 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.97□□□□□ -2.09
PRPF3O43395 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
PRPF3O43395 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
PRPF3O43395 Y_RNA.4-201ENST00000362333 112 ntBASIC1.96□□□□□ -2.1
PRPF3O43395 RNU6-379P-201ENST00000363813 104 ntBASIC1.96□□□□□ -2.1
PRPF3O43395 snoU2-30.1-201ENST00000365012 70 ntBASIC1.96□□□□□ -2.1
PRPF3O43395 SNORA8.3-201ENST00000384679 139 ntBASIC1.96□□□□□ -2.1
PRPF3O43395 MIR891A-201ENST00000401237 79 ntBASIC1.96□□□□□ -2.1
PRPF3O43395 MIR1278-201ENST00000408753 81 ntBASIC1.96□□□□□ -2.1
PRPF3O43395 RNU6-383P-201ENST00000410864 94 ntBASIC1.96□□□□□ -2.1
PRPF3O43395 MLLT10P1-201ENST00000418346 262 ntBASIC1.96□□□□□ -2.1
PRPF3O43395 AC024614.2-201ENST00000577584 372 ntBASIC1.96□□□□□ -2.1
PRPF3O43395 MIR4724-201ENST00000579485 89 ntBASIC1.96□□□□□ -2.1
PRPF3O43395 MIR8081-201ENST00000611533 95 ntBASIC1.96□□□□□ -2.1
PRPF3O43395 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
PRPF3O43395 RNU6-1209P-201ENST00000363655 107 ntBASIC1.95□□□□□ -2.1
PRPF3O43395 RNU4-10P-201ENST00000364383 140 ntBASIC1.95□□□□□ -2.1
PRPF3O43395 Y_RNA.336-201ENST00000365307 109 ntBASIC1.95□□□□□ -2.1
PRPF3O43395 MIR522-201ENST00000385071 87 ntBASIC1.95□□□□□ -2.1
PRPF3O43395 AL627390.1-201ENST00000396055 340 ntBASIC1.95□□□□□ -2.1
PRPF3O43395 AC079140.2-201ENST00000506193 142 ntBASIC1.95□□□□□ -2.1
PRPF3O43395 RNU7-12P-201ENST00000516030 62 ntBASIC1.95□□□□□ -2.1
PRPF3O43395 MIR3122-201ENST00000577243 73 ntBASIC1.95□□□□□ -2.1
PRPF3O43395 AC011921.3-201ENST00000605540 361 ntBASIC1.95□□□□□ -2.1
PRPF3O43395 AL365265.1-201ENST00000621045 234 ntBASIC1.95□□□□□ -2.1
PRPF3O43395 Y_RNA.796-201ENST00000364268 102 ntBASIC1.94□□□□□ -2.1
PRPF3O43395 Y_RNA.262-201ENST00000364641 102 ntBASIC1.94□□□□□ -2.1
PRPF3O43395 Y_RNA.799-201ENST00000364992 102 ntBASIC1.94□□□□□ -2.1
PRPF3O43395 RNU6-163P-201ENST00000384396 106 ntBASIC1.94□□□□□ -2.1
PRPF3O43395 CALM2P4-201ENST00000430810 426 ntBASIC1.94□□□□□ -2.1
PRPF3O43395 RNU6-1053P-201ENST00000515930 101 ntBASIC1.94□□□□□ -2.1
PRPF3O43395 AC100767.1-201ENST00000528178 123 ntBASIC1.94□□□□□ -2.1
PRPF3O43395 RPL23AP91-201ENST00000569211 455 ntBASIC1.94□□□□□ -2.1
PRPF3O43395 MIR4498-201ENST00000577599 66 ntBASIC1.94□□□□□ -2.1
PRPF3O43395 MIR3683-201ENST00000580847 82 ntBASIC1.94□□□□□ -2.1
PRPF3O43395 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.94□□□□□ -2.1
PRPF3O43395 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
PRPF3O43395 MIRLET7C-201ENST00000362160 84 ntBASIC1.93□□□□□ -2.1
PRPF3O43395 MIR302D-201ENST00000362275 68 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms