Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 Y_RNA.621-201ENST00000411065 96 ntBASIC1.85□□□□□ -2.11
MSI1O43347 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.85□□□□□ -2.11
MSI1O43347 SNORA31.17-201ENST00000516953 127 ntBASIC1.85□□□□□ -2.11
MSI1O43347 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.85□□□□□ -2.11
MSI1O43347 MIR3668-201ENST00000582138 75 ntBASIC1.85□□□□□ -2.11
MSI1O43347 MIR378A-201ENST00000362177 66 ntBASIC1.84□□□□□ -2.11
MSI1O43347 MIR367-201ENST00000362299 68 ntBASIC1.84□□□□□ -2.11
MSI1O43347 Y_RNA.253-201ENST00000364562 112 ntBASIC1.84□□□□□ -2.11
MSI1O43347 SNORA8.3-201ENST00000384679 139 ntBASIC1.84□□□□□ -2.11
MSI1O43347 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
MSI1O43347 RNU6-440P-201ENST00000390882 105 ntBASIC1.84□□□□□ -2.11
MSI1O43347 RNU6-918P-201ENST00000391219 106 ntBASIC1.84□□□□□ -2.11
MSI1O43347 RNU6-381P-201ENST00000391259 108 ntBASIC1.84□□□□□ -2.11
MSI1O43347 RNU6-321P-201ENST00000410912 106 ntBASIC1.84□□□□□ -2.11
MSI1O43347 AL158823.1-201ENST00000418441 478 ntBASIC1.84□□□□□ -2.11
MSI1O43347 AC108667.1-201ENST00000428618 249 ntBASIC1.84□□□□□ -2.11
MSI1O43347 RNU2-56P-201ENST00000516826 190 ntBASIC1.84□□□□□ -2.11
MSI1O43347 MIR4419B-201ENST00000577260 68 ntBASIC1.84□□□□□ -2.11
MSI1O43347 MIR4724-201ENST00000579485 89 ntBASIC1.84□□□□□ -2.11
MSI1O43347 AC008555.8-201ENST00000623602 2168 ntBASIC1.83□□□□□ -2.12
MSI1O43347 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
MSI1O43347 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
MSI1O43347 RNU6-1209P-201ENST00000363655 107 ntBASIC1.83□□□□□ -2.12
MSI1O43347 RNU4-17P-201ENST00000365598 141 ntBASIC1.83□□□□□ -2.12
MSI1O43347 AL627390.1-201ENST00000396055 340 ntBASIC1.83□□□□□ -2.12
MSI1O43347 AC009310.1-201ENST00000414414 451 ntBASIC1.83□□□□□ -2.12
MSI1O43347 COX6CP10-201ENST00000416832 224 ntBASIC1.83□□□□□ -2.12
MSI1O43347 AC107393.1-201ENST00000512403 346 ntBASIC1.83□□□□□ -2.12
MSI1O43347 SCARNA8-201ENST00000515924 131 ntBASIC1.83□□□□□ -2.12
MSI1O43347 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.83□□□□□ -2.12
MSI1O43347 MIR3122-201ENST00000577243 73 ntBASIC1.83□□□□□ -2.12
MSI1O43347 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.83□□□□□ -2.12
MSI1O43347 AL021707.8-201ENST00000609428 183 ntBASIC1.83□□□□□ -2.12
MSI1O43347 AL591926.4-201ENST00000616895 298 ntBASIC1.83□□□□□ -2.12
MSI1O43347 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
MSI1O43347 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
MSI1O43347 Y_RNA.229-201ENST00000364347 113 ntBASIC1.82□□□□□ -2.12
MSI1O43347 RNU4-41P-201ENST00000364426 143 ntBASIC1.82□□□□□ -2.12
MSI1O43347 Y_RNA.785-201ENST00000384290 109 ntBASIC1.82□□□□□ -2.12
MSI1O43347 AL512604.1-201ENST00000404812 257 ntBASIC1.82□□□□□ -2.12
MSI1O43347 RNU2-7P-201ENST00000410794 178 ntBASIC1.82□□□□□ -2.12
MSI1O43347 STAG3L5P-204ENST00000443759 179 ntBASIC1.82□□□□□ -2.12
MSI1O43347 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.82□□□□□ -2.12
MSI1O43347 Y_RNA.644-201ENST00000459006 113 ntBASIC1.82□□□□□ -2.12
MSI1O43347 AL049830.1-201ENST00000468034 425 ntBASIC1.82□□□□□ -2.12
MSI1O43347 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.82□□□□□ -2.12
MSI1O43347 Y_RNA.674-201ENST00000516362 113 ntBASIC1.82□□□□□ -2.12
MSI1O43347 Z83818.1-201ENST00000603584 150 ntBASIC1.82□□□□□ -2.12
MSI1O43347 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
MSI1O43347 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
MSI1O43347 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
MSI1O43347 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
MSI1O43347 RNU6-1020P-201ENST00000363684 107 ntBASIC1.81□□□□□ -2.12
MSI1O43347 RN7SKP101-201ENST00000411376 320 ntBASIC1.81□□□□□ -2.12
MSI1O43347 HMGN2P19-201ENST00000425149 265 ntBASIC1.81□□□□□ -2.12
MSI1O43347 MTND5P15-201ENST00000434246 349 ntBASIC1.81□□□□□ -2.12
MSI1O43347 Z98949.2-201ENST00000440996 144 ntBASIC1.81□□□□□ -2.12
MSI1O43347 SNORD11-201ENST00000459124 84 ntBASIC1.81□□□□□ -2.12
MSI1O43347 RNA5SP57-201ENST00000459463 123 ntBASIC1.81□□□□□ -2.12
MSI1O43347 HMGN1P7-201ENST00000491722 313 ntBASIC1.81□□□□□ -2.12
MSI1O43347 OR9P1P-201ENST00000496431 281 ntBASIC1.81□□□□□ -2.12
MSI1O43347 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.81□□□□□ -2.12
MSI1O43347 Y_RNA.700-201ENST00000516806 100 ntBASIC1.81□□□□□ -2.12
MSI1O43347 RNU6-453P-201ENST00000516819 85 ntBASIC1.81□□□□□ -2.12
MSI1O43347 RNU6-250P-201ENST00000516958 103 ntBASIC1.81□□□□□ -2.12
MSI1O43347 SNORA81.3-201ENST00000517283 198 ntBASIC1.81□□□□□ -2.12
MSI1O43347 AC022559.1-201ENST00000520905 205 ntBASIC1.81□□□□□ -2.12
MSI1O43347 AC022254.1-201ENST00000567857 235 ntBASIC1.81□□□□□ -2.12
MSI1O43347 RPL23AP91-201ENST00000569211 455 ntBASIC1.81□□□□□ -2.12
MSI1O43347 MIR4287-201ENST00000579398 78 ntBASIC1.81□□□□□ -2.12
MSI1O43347 MIR5688-201ENST00000580619 83 ntBASIC1.81□□□□□ -2.12
MSI1O43347 AL773524.1-201ENST00000614065 229 ntBASIC1.81□□□□□ -2.12
MSI1O43347 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
MSI1O43347 RNU2-64P-201ENST00000411315 191 ntBASIC1.8□□□□□ -2.12
MSI1O43347 AL138752.1-201ENST00000452964 351 ntBASIC1.8□□□□□ -2.12
MSI1O43347 AC245047.8-201ENST00000456455 284 ntBASIC1.8□□□□□ -2.12
MSI1O43347 RNA5SP233-201ENST00000459153 113 ntBASIC1.8□□□□□ -2.12
MSI1O43347 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.8□□□□□ -2.12
MSI1O43347 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
MSI1O43347 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
MSI1O43347 MIR126-201ENST00000362291 85 ntBASIC1.79□□□□□ -2.12
MSI1O43347 Y_RNA.29-201ENST00000362570 113 ntBASIC1.79□□□□□ -2.12
MSI1O43347 Y_RNA.265-201ENST00000364677 108 ntBASIC1.79□□□□□ -2.12
MSI1O43347 RNU6-1031P-201ENST00000384773 107 ntBASIC1.79□□□□□ -2.12
MSI1O43347 MIR17-201ENST00000385012 84 ntBASIC1.79□□□□□ -2.12
MSI1O43347 MT-TT-201ENST00000387460 66 ntBASIC1.79□□□□□ -2.12
MSI1O43347 RNA5SP212-201ENST00000391223 107 ntBASIC1.79□□□□□ -2.12
MSI1O43347 Y_RNA.793-201ENST00000411222 111 ntBASIC1.79□□□□□ -2.12
MSI1O43347 AC244636.1-201ENST00000421152 228 ntBASIC1.79□□□□□ -2.12
MSI1O43347 snoU13.27-201ENST00000459278 104 ntBASIC1.79□□□□□ -2.12
MSI1O43347 NDUFA4P2-201ENST00000489989 244 ntBASIC1.79□□□□□ -2.12
MSI1O43347 AC099513.1-201ENST00000490423 301 ntBASIC1.79□□□□□ -2.12
MSI1O43347 TRMT112P2-201ENST00000512910 132 ntBASIC1.79□□□□□ -2.12
MSI1O43347 RN7SKP164-201ENST00000516138 266 ntBASIC1.79□□□□□ -2.12
MSI1O43347 SNORA25.15-201ENST00000516487 89 ntBASIC1.79□□□□□ -2.12
MSI1O43347 MIR4299-201ENST00000577899 72 ntBASIC1.79□□□□□ -2.12
MSI1O43347 AL359821.1-201ENST00000605519 182 ntBASIC1.79□□□□□ -2.12
MSI1O43347 RNU2-4P-201ENST00000606190 192 ntBASIC1.79□□□□□ -2.12
MSI1O43347 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
MSI1O43347 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms