Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 Y_RNA.617-201ENST00000410920 90 ntBASIC2.51□□□□□ -2.01
SHOXO15266 AL445646.1-201ENST00000431784 216 ntBASIC2.51□□□□□ -2.01
SHOXO15266 AC087499.4-201ENST00000448505 178 ntBASIC2.51□□□□□ -2.01
SHOXO15266 RN7SL863P-201ENST00000462370 296 ntBASIC2.51□□□□□ -2.01
SHOXO15266 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.51□□□□□ -2.01
SHOXO15266 RNA5SP236-201ENST00000516169 116 ntBASIC2.51□□□□□ -2.01
SHOXO15266 RNU7-70P-201ENST00000516941 66 ntBASIC2.51□□□□□ -2.01
SHOXO15266 RN7SKP57-201ENST00000517248 293 ntBASIC2.51□□□□□ -2.01
SHOXO15266 MTND5P34-201ENST00000568888 325 ntBASIC2.51□□□□□ -2.01
SHOXO15266 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.51□□□□□ -2.01
SHOXO15266 RNU1-51P-201ENST00000365345 176 ntBASIC2.5□□□□□ -2.01
SHOXO15266 Y_RNA.547-201ENST00000384654 119 ntBASIC2.5□□□□□ -2.01
SHOXO15266 RNU2-52P-201ENST00000410680 190 ntBASIC2.5□□□□□ -2.01
SHOXO15266 AC007064.1-201ENST00000412238 351 ntBASIC2.5□□□□□ -2.01
SHOXO15266 SNRPGP14-201ENST00000435400 219 ntBASIC2.5□□□□□ -2.01
SHOXO15266 RNA5SP82-201ENST00000516707 92 ntBASIC2.5□□□□□ -2.01
SHOXO15266 AL670379.3-201ENST00000605040 251 ntBASIC2.5□□□□□ -2.01
SHOXO15266 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.5□□□□□ -2.01
SHOXO15266 AC015726.2-201ENST00000620112 122 ntBASIC2.5□□□□□ -2.01
SHOXO15266 U1.36-201ENST00000620684 176 ntBASIC2.5□□□□□ -2.01
SHOXO15266 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
SHOXO15266 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SHOXO15266 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.49□□□□□ -2.01
SHOXO15266 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
SHOXO15266 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SHOXO15266 Y_RNA.37-201ENST00000362606 108 ntBASIC2.49□□□□□ -2.01
SHOXO15266 SNORA2.2-201ENST00000365473 135 ntBASIC2.49□□□□□ -2.01
SHOXO15266 RNU4-47P-201ENST00000410876 114 ntBASIC2.49□□□□□ -2.01
SHOXO15266 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.49□□□□□ -2.01
SHOXO15266 Y_RNA.651-201ENST00000459380 103 ntBASIC2.49□□□□□ -2.01
SHOXO15266 AC114811.1-201ENST00000507207 168 ntBASIC2.49□□□□□ -2.01
SHOXO15266 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.49□□□□□ -2.01
SHOXO15266 RNA5SP267-201ENST00000364893 126 ntBASIC2.48□□□□□ -2.01
SHOXO15266 RNU6-424P-201ENST00000384367 105 ntBASIC2.48□□□□□ -2.01
SHOXO15266 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.48□□□□□ -2.01
SHOXO15266 BX510359.1-201ENST00000456973 237 ntBASIC2.48□□□□□ -2.01
SHOXO15266 RN7SKP19-201ENST00000516016 252 ntBASIC2.48□□□□□ -2.01
SHOXO15266 SNORA31.10-201ENST00000516482 106 ntBASIC2.48□□□□□ -2.01
SHOXO15266 RNA5SP481-201ENST00000516814 122 ntBASIC2.48□□□□□ -2.01
SHOXO15266 SCARNA15-202ENST00000516881 127 ntBASIC2.48□□□□□ -2.01
SHOXO15266 AC104984.5-201ENST00000586878 94 ntBASIC2.48□□□□□ -2.01
SHOXO15266 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.48□□□□□ -2.01
SHOXO15266 MIR3651-201ENST00000630427 90 ntBASIC2.48□□□□□ -2.01
SHOXO15266 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SHOXO15266 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SHOXO15266 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.47□□□□□ -2.01
SHOXO15266 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SHOXO15266 MIR548A3-201ENST00000385297 97 ntBASIC2.47□□□□□ -2.01
SHOXO15266 SNORD67-201ENST00000390833 111 ntBASIC2.47□□□□□ -2.01
SHOXO15266 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.47□□□□□ -2.01
SHOXO15266 RPL23AP94-201ENST00000512518 302 ntBASIC2.47□□□□□ -2.01
SHOXO15266 MIR5680-201ENST00000577577 84 ntBASIC2.47□□□□□ -2.01
SHOXO15266 AC025166.1-201ENST00000612411 163 ntBASIC2.47□□□□□ -2.01
SHOXO15266 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.47□□□□□ -2.01
SHOXO15266 AL121890.5-201ENST00000620848 304 ntBASIC2.47□□□□□ -2.01
SHOXO15266 MIR6852-201ENST00000621699 66 ntBASIC2.47□□□□□ -2.01
SHOXO15266 MIR622-201ENST00000638396 96 ntBASIC2.47□□□□□ -2.01
SHOXO15266 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
SHOXO15266 RNU6-833P-201ENST00000363486 107 ntBASIC2.46□□□□□ -2.02
SHOXO15266 RNU6-44P-201ENST00000384045 107 ntBASIC2.46□□□□□ -2.02
SHOXO15266 SNORA7.4-201ENST00000384249 137 ntBASIC2.46□□□□□ -2.02
SHOXO15266 UBE2DNL-203ENST00000474922 222 ntBASIC2.46□□□□□ -2.02
SHOXO15266 RN7SL20P-201ENST00000488827 297 ntBASIC2.46□□□□□ -2.02
SHOXO15266 UBL5P2-201ENST00000583788 219 ntBASIC2.46□□□□□ -2.02
SHOXO15266 ZNF861P-201ENST00000588126 639 ntBASIC2.46□□□□□ -2.02
SHOXO15266 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SHOXO15266 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SHOXO15266 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
SHOXO15266 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.46□□□□□ -2.02
SHOXO15266 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SHOXO15266 ZNF720P1-201ENST00000562403 1939 ntBASIC2.45□□□□□ -2.02
SHOXO15266 MIRLET7C-201ENST00000362160 84 ntBASIC2.45□□□□□ -2.02
SHOXO15266 RNU6-508P-201ENST00000363231 103 ntBASIC2.45□□□□□ -2.02
SHOXO15266 Y_RNA.454-201ENST00000384224 113 ntBASIC2.45□□□□□ -2.02
SHOXO15266 SNORA48.2-201ENST00000390926 124 ntBASIC2.45□□□□□ -2.02
SHOXO15266 AL627390.1-201ENST00000396055 340 ntBASIC2.45□□□□□ -2.02
SHOXO15266 RNA5SP136-201ENST00000410906 107 ntBASIC2.45□□□□□ -2.02
SHOXO15266 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.45□□□□□ -2.02
SHOXO15266 AC005326.1-201ENST00000429197 123 ntBASIC2.45□□□□□ -2.02
SHOXO15266 HSPE1P9-201ENST00000440046 311 ntBASIC2.45□□□□□ -2.02
SHOXO15266 RNU7-34P-201ENST00000459394 64 ntBASIC2.45□□□□□ -2.02
SHOXO15266 RNU7-80P-201ENST00000459562 61 ntBASIC2.45□□□□□ -2.02
SHOXO15266 SNORD33.1-201ENST00000516213 88 ntBASIC2.45□□□□□ -2.02
SHOXO15266 RNVU1-2-201ENST00000516326 135 ntBASIC2.45□□□□□ -2.02
SHOXO15266 SNORA18.7-201ENST00000516910 131 ntBASIC2.45□□□□□ -2.02
SHOXO15266 AP003484.1-201ENST00000530974 250 ntBASIC2.45□□□□□ -2.02
SHOXO15266 MIR4778-201ENST00000577635 80 ntBASIC2.45□□□□□ -2.02
SHOXO15266 AL137847.3-201ENST00000611521 109 ntBASIC2.45□□□□□ -2.02
SHOXO15266 MIR6129-201ENST00000616087 109 ntBASIC2.45□□□□□ -2.02
SHOXO15266 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SHOXO15266 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
SHOXO15266 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
SHOXO15266 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SHOXO15266 MIR22-201ENST00000362190 85 ntBASIC2.44□□□□□ -2.02
SHOXO15266 RNU6-1031P-201ENST00000384773 107 ntBASIC2.44□□□□□ -2.02
SHOXO15266 MIR128-1-201ENST00000384921 82 ntBASIC2.44□□□□□ -2.02
SHOXO15266 COTL1P1-201ENST00000422309 375 ntBASIC2.44□□□□□ -2.02
SHOXO15266 AC011753.1-201ENST00000451001 220 ntBASIC2.44□□□□□ -2.02
SHOXO15266 RPL23AP63-201ENST00000498752 471 ntBASIC2.44□□□□□ -2.02
SHOXO15266 SUB1P4-201ENST00000566062 339 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 195.1 ms