Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 RNU6-1170P-201ENST00000515974 106 ntBASIC0.31□□□□□ -2.36
COL6A6A6NMZ7 FRG2DP-202ENST00000566967 323 ntBASIC0.31□□□□□ -2.36
COL6A6A6NMZ7 Z83818.1-201ENST00000603584 150 ntBASIC0.31□□□□□ -2.36
COL6A6A6NMZ7 AC022140.2-201ENST00000623500 188 ntBASIC0.31□□□□□ -2.36
COL6A6A6NMZ7 RNU6-674P-201ENST00000363831 107 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 SNORD95.1-201ENST00000364099 68 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 RNU4-67P-201ENST00000364569 141 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 Y_RNA.310-201ENST00000365063 113 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 RNU6-131P-201ENST00000391144 107 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 SNORA36B-201ENST00000410438 131 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 AC063976.4-201ENST00000421971 163 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 AL157398.1-201ENST00000452981 186 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 RPL7P42-201ENST00000481005 679 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 PRDX4P1-201ENST00000507189 574 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 RNA5SP67-201ENST00000516422 131 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 AC040926.1-201ENST00000530195 238 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 AC108676.2-201ENST00000605225 163 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 AC025253.1-201ENST00000613623 543 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 7SK.10-201ENST00000621414 298 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 AC098679.4-201ENST00000624241 654 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 RNA5SP361-201ENST00000362686 118 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 Y_RNA.148-201ENST00000363557 117 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 Y_RNA.253-201ENST00000364562 112 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 RNU6-890P-201ENST00000384121 107 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 U8.17-201ENST00000391292 132 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 SNORD111-201ENST00000408139 94 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 RNU4-30P-201ENST00000410245 143 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 RNU2-61P-201ENST00000411069 191 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 snoU13.21-201ENST00000459368 105 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 RPL23AP54-201ENST00000495129 419 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 RNU2-12P-201ENST00000517216 168 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 MTND4LP26-201ENST00000518144 282 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 AC004817.2-201ENST00000561794 651 ntBASIC0.3□□□□□ -2.36
COL6A6A6NMZ7 RNA5SP264-201ENST00000363115 107 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 RNU4-73P-201ENST00000363164 141 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 SNORA33-201ENST00000363664 130 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 Y_RNA.259-201ENST00000364619 101 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 RNU6-1067P-201ENST00000384752 107 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 MIR1278-201ENST00000408753 81 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 RNU6-1199P-201ENST00000411249 104 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 RNU2-64P-201ENST00000411315 191 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 RNU6-1304P-201ENST00000411374 106 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 MTND1P14-201ENST00000427400 950 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 FCF1P4-201ENST00000448326 183 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 RNU6-699P-201ENST00000517081 110 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 RNA5SP327-201ENST00000362494 101 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 RNU6-626P-201ENST00000363354 107 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 SNORA1.2-201ENST00000365189 134 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 Y_RNA.370-201ENST00000365589 108 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 SNORA24-201ENST00000384096 131 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 RNU6-364P-201ENST00000384387 107 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 RNU6-602P-201ENST00000411155 105 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 AC006461.1-201ENST00000412637 326 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 AL390729.2-201ENST00000416137 156 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 AC233266.1-201ENST00000454518 96 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 AC091179.3-201ENST00000474761 144 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 PSMC1P5-201ENST00000512850 177 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 MIR4667-201ENST00000578933 66 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 AC242852.1-201ENST00000612151 96 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 AC244015.1-201ENST00000622301 99 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 AC112487.2-201ENST00000637950 304 ntBASIC0.29□□□□□ -2.36
COL6A6A6NMZ7 RNU6-1266P-201ENST00000362794 105 ntBASIC0.28□□□□□ -2.36
COL6A6A6NMZ7 Y_RNA.72-201ENST00000362894 103 ntBASIC0.28□□□□□ -2.36
COL6A6A6NMZ7 Y_RNA.88-201ENST00000363029 99 ntBASIC0.28□□□□□ -2.36
COL6A6A6NMZ7 Y_RNA.315-201ENST00000365117 102 ntBASIC0.28□□□□□ -2.36
COL6A6A6NMZ7 SNORD81.2-201ENST00000365153 76 ntBASIC0.28□□□□□ -2.36
COL6A6A6NMZ7 RNU6-1237P-201ENST00000384777 107 ntBASIC0.28□□□□□ -2.36
COL6A6A6NMZ7 MIR136-201ENST00000385207 82 ntBASIC0.28□□□□□ -2.36
COL6A6A6NMZ7 MIR548F1-201ENST00000408667 84 ntBASIC0.28□□□□□ -2.36
COL6A6A6NMZ7 RNA5SP266-201ENST00000410273 108 ntBASIC0.28□□□□□ -2.36
COL6A6A6NMZ7 RNU6-613P-201ENST00000410412 108 ntBASIC0.28□□□□□ -2.36
COL6A6A6NMZ7 MIR1468-201ENST00000410600 86 ntBASIC0.28□□□□□ -2.36
COL6A6A6NMZ7 RNU6-130P-201ENST00000411112 103 ntBASIC0.28□□□□□ -2.36
COL6A6A6NMZ7 MLLT10P1-201ENST00000418346 262 ntBASIC0.28□□□□□ -2.36
COL6A6A6NMZ7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.28□□□□□ -2.36
COL6A6A6NMZ7 RNU6-693P-201ENST00000516134 107 ntBASIC0.28□□□□□ -2.36
COL6A6A6NMZ7 RNU6-966P-201ENST00000516479 104 ntBASIC0.28□□□□□ -2.36
COL6A6A6NMZ7 SNORA18.7-201ENST00000516910 131 ntBASIC0.28□□□□□ -2.36
COL6A6A6NMZ7 AC007751.1-201ENST00000529260 376 ntBASIC0.28□□□□□ -2.36
COL6A6A6NMZ7 MIR4264-201ENST00000583520 66 ntBASIC0.28□□□□□ -2.36
COL6A6A6NMZ7 AC006157.1-201ENST00000611750 366 ntBASIC0.28□□□□□ -2.36
COL6A6A6NMZ7 U2.1-201ENST00000618978 145 ntBASIC0.28□□□□□ -2.36
COL6A6A6NMZ7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.28□□□□□ -2.36
COL6A6A6NMZ7 AC068647.2-201ENST00000637380 353 ntBASIC0.28□□□□□ -2.36
COL6A6A6NMZ7 Y_RNA.44-201ENST00000362676 108 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.101-201ENST00000363154 102 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 SNORA72.1-201ENST00000363485 129 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.363-201ENST00000365529 113 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 MIR15B-201ENST00000385045 98 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 MIR516B2-201ENST00000385190 85 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 MIR873-201ENST00000401120 77 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms