Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 RNU6-833P-201ENST00000363486 107 ntBASIC1.16□□□□□ -2.22
NKX6-3A6NJ46 RNU6-1209P-201ENST00000363655 107 ntBASIC1.16□□□□□ -2.22
NKX6-3A6NJ46 U8.5-201ENST00000364528 136 ntBASIC1.16□□□□□ -2.22
NKX6-3A6NJ46 Y_RNA.276-201ENST00000364732 109 ntBASIC1.16□□□□□ -2.22
NKX6-3A6NJ46 SNORD50B-201ENST00000364995 70 ntBASIC1.16□□□□□ -2.22
NKX6-3A6NJ46 RNU6-713P-201ENST00000384761 107 ntBASIC1.16□□□□□ -2.22
NKX6-3A6NJ46 MIR606-201ENST00000384851 96 ntBASIC1.16□□□□□ -2.22
NKX6-3A6NJ46 SNORD41-201ENST00000386967 70 ntBASIC1.16□□□□□ -2.22
NKX6-3A6NJ46 MIR1298-201ENST00000408783 112 ntBASIC1.16□□□□□ -2.22
NKX6-3A6NJ46 AL731563.1-201ENST00000442202 214 ntBASIC1.16□□□□□ -2.22
NKX6-3A6NJ46 RNU6-437P-201ENST00000459408 95 ntBASIC1.16□□□□□ -2.22
NKX6-3A6NJ46 AC108729.3-201ENST00000513484 108 ntBASIC1.16□□□□□ -2.22
NKX6-3A6NJ46 RNU6-1143P-201ENST00000516125 104 ntBASIC1.16□□□□□ -2.22
NKX6-3A6NJ46 Y_RNA.720-201ENST00000517166 92 ntBASIC1.16□□□□□ -2.22
NKX6-3A6NJ46 AC090049.2-201ENST00000550377 109 ntBASIC1.16□□□□□ -2.22
NKX6-3A6NJ46 RPL23AP91-201ENST00000569211 455 ntBASIC1.16□□□□□ -2.22
NKX6-3A6NJ46 AL513534.2-201ENST00000603836 250 ntBASIC1.16□□□□□ -2.22
NKX6-3A6NJ46 MIR8065-201ENST00000620577 100 ntBASIC1.16□□□□□ -2.22
NKX6-3A6NJ46 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.16□□□□□ -2.22
NKX6-3A6NJ46 snoU2-30.1-201ENST00000365012 70 ntBASIC1.15□□□□□ -2.23
NKX6-3A6NJ46 SNORA2.2-201ENST00000365473 135 ntBASIC1.15□□□□□ -2.23
NKX6-3A6NJ46 Y_RNA.422-201ENST00000384054 114 ntBASIC1.15□□□□□ -2.23
NKX6-3A6NJ46 BTF3P11-201ENST00000426582 477 ntBASIC1.15□□□□□ -2.23
NKX6-3A6NJ46 RPL30P7-201ENST00000479312 323 ntBASIC1.15□□□□□ -2.23
NKX6-3A6NJ46 RNU6-165P-201ENST00000517170 99 ntBASIC1.15□□□□□ -2.23
NKX6-3A6NJ46 AC019288.1-201ENST00000557918 224 ntBASIC1.15□□□□□ -2.23
NKX6-3A6NJ46 MIR4762-201ENST00000585261 75 ntBASIC1.15□□□□□ -2.23
NKX6-3A6NJ46 AC008737.2-201ENST00000599446 118 ntBASIC1.15□□□□□ -2.23
NKX6-3A6NJ46 Y_RNA.812-201ENST00000610788 101 ntBASIC1.15□□□□□ -2.23
NKX6-3A6NJ46 Y_RNA.784-201ENST00000613803 101 ntBASIC1.15□□□□□ -2.23
NKX6-3A6NJ46 Y_RNA.787-201ENST00000616522 101 ntBASIC1.15□□□□□ -2.23
NKX6-3A6NJ46 Y_RNA.780-201ENST00000617336 101 ntBASIC1.15□□□□□ -2.23
NKX6-3A6NJ46 Y_RNA.801-201ENST00000619005 101 ntBASIC1.15□□□□□ -2.23
NKX6-3A6NJ46 AC027279.3-201ENST00000625055 122 ntBASIC1.15□□□□□ -2.23
NKX6-3A6NJ46 RNA5SP327-201ENST00000362494 101 ntBASIC1.14□□□□□ -2.23
NKX6-3A6NJ46 RNU6-1205P-201ENST00000363625 106 ntBASIC1.14□□□□□ -2.23
NKX6-3A6NJ46 Y_RNA.796-201ENST00000364268 102 ntBASIC1.14□□□□□ -2.23
NKX6-3A6NJ46 Y_RNA.799-201ENST00000364992 102 ntBASIC1.14□□□□□ -2.23
NKX6-3A6NJ46 RNU6-1160P-201ENST00000384546 104 ntBASIC1.14□□□□□ -2.23
NKX6-3A6NJ46 RNU6-939P-201ENST00000384634 107 ntBASIC1.14□□□□□ -2.23
NKX6-3A6NJ46 MIR653-201ENST00000385279 96 ntBASIC1.14□□□□□ -2.23
NKX6-3A6NJ46 MIR802-201ENST00000390235 94 ntBASIC1.14□□□□□ -2.23
NKX6-3A6NJ46 RNU6-1109P-201ENST00000391187 107 ntBASIC1.14□□□□□ -2.23
NKX6-3A6NJ46 RNU6-383P-201ENST00000410864 94 ntBASIC1.14□□□□□ -2.23
NKX6-3A6NJ46 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.14□□□□□ -2.23
NKX6-3A6NJ46 Y_RNA.637-201ENST00000459424 114 ntBASIC1.14□□□□□ -2.23
NKX6-3A6NJ46 RNU6-1053P-201ENST00000515930 101 ntBASIC1.14□□□□□ -2.23
NKX6-3A6NJ46 Y_RNA.714-201ENST00000517065 90 ntBASIC1.14□□□□□ -2.23
NKX6-3A6NJ46 MIR4421-201ENST00000578133 69 ntBASIC1.14□□□□□ -2.23
NKX6-3A6NJ46 GHRLOS.1-201ENST00000610995 70 ntBASIC1.14□□□□□ -2.23
NKX6-3A6NJ46 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.14□□□□□ -2.23
NKX6-3A6NJ46 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
NKX6-3A6NJ46 RNU6-899P-201ENST00000363947 107 ntBASIC1.13□□□□□ -2.23
NKX6-3A6NJ46 Y_RNA.293-201ENST00000364908 93 ntBASIC1.13□□□□□ -2.23
NKX6-3A6NJ46 RNU6-326P-201ENST00000365480 107 ntBASIC1.13□□□□□ -2.23
NKX6-3A6NJ46 MIR452-201ENST00000385020 85 ntBASIC1.13□□□□□ -2.23
NKX6-3A6NJ46 RNU6-1203P-201ENST00000410703 110 ntBASIC1.13□□□□□ -2.23
NKX6-3A6NJ46 RNU6-321P-201ENST00000410912 106 ntBASIC1.13□□□□□ -2.23
NKX6-3A6NJ46 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.13□□□□□ -2.23
NKX6-3A6NJ46 RNU6-1338P-201ENST00000516328 91 ntBASIC1.13□□□□□ -2.23
NKX6-3A6NJ46 AL359821.1-201ENST00000605519 182 ntBASIC1.13□□□□□ -2.23
NKX6-3A6NJ46 AC068700.1-201ENST00000565862 3754 ntBASIC1.12□□□□□ -2.23
NKX6-3A6NJ46 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
NKX6-3A6NJ46 RNU6-1272P-201ENST00000362776 107 ntBASIC1.12□□□□□ -2.23
NKX6-3A6NJ46 SNORD14E-201ENST00000364009 85 ntBASIC1.12□□□□□ -2.23
NKX6-3A6NJ46 SNORA63C-201ENST00000364578 129 ntBASIC1.12□□□□□ -2.23
NKX6-3A6NJ46 Y_RNA.376-201ENST00000365638 108 ntBASIC1.12□□□□□ -2.23
NKX6-3A6NJ46 Y_RNA.459-201ENST00000384251 102 ntBASIC1.12□□□□□ -2.23
NKX6-3A6NJ46 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.12□□□□□ -2.23
NKX6-3A6NJ46 TRBVB-201ENST00000477100 408 ntBASIC1.12□□□□□ -2.23
NKX6-3A6NJ46 NDUFA4P2-201ENST00000489989 244 ntBASIC1.12□□□□□ -2.23
NKX6-3A6NJ46 SNORA18.7-201ENST00000516910 131 ntBASIC1.12□□□□□ -2.23
NKX6-3A6NJ46 AC090142.3-201ENST00000519012 385 ntBASIC1.12□□□□□ -2.23
NKX6-3A6NJ46 snoU18.1-201ENST00000629629 71 ntBASIC1.12□□□□□ -2.23
NKX6-3A6NJ46 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
NKX6-3A6NJ46 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
NKX6-3A6NJ46 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.11□□□□□ -2.23
NKX6-3A6NJ46 Y_RNA.4-201ENST00000362333 112 ntBASIC1.11□□□□□ -2.23
NKX6-3A6NJ46 Y_RNA.117-201ENST00000363294 101 ntBASIC1.11□□□□□ -2.23
NKX6-3A6NJ46 SNORA7.1-201ENST00000363750 139 ntBASIC1.11□□□□□ -2.23
NKX6-3A6NJ46 RNU4-10P-201ENST00000364383 140 ntBASIC1.11□□□□□ -2.23
NKX6-3A6NJ46 Y_RNA.237-201ENST00000364439 102 ntBASIC1.11□□□□□ -2.23
NKX6-3A6NJ46 Y_RNA.336-201ENST00000365307 109 ntBASIC1.11□□□□□ -2.23
NKX6-3A6NJ46 MIR758-201ENST00000390227 88 ntBASIC1.11□□□□□ -2.23
NKX6-3A6NJ46 AC015922.2-201ENST00000435593 184 ntBASIC1.11□□□□□ -2.23
NKX6-3A6NJ46 RNU1-123P-201ENST00000458950 160 ntBASIC1.11□□□□□ -2.23
NKX6-3A6NJ46 AC048334.1-201ENST00000477975 159 ntBASIC1.11□□□□□ -2.23
NKX6-3A6NJ46 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.11□□□□□ -2.23
NKX6-3A6NJ46 SERF1AP1-201ENST00000514575 187 ntBASIC1.11□□□□□ -2.23
NKX6-3A6NJ46 SNORA31.2-201ENST00000516019 134 ntBASIC1.11□□□□□ -2.23
NKX6-3A6NJ46 AL157834.3-201ENST00000615543 103 ntBASIC1.11□□□□□ -2.23
NKX6-3A6NJ46 AC013791.1-201ENST00000616619 62 ntBASIC1.11□□□□□ -2.23
NKX6-3A6NJ46 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.11□□□□□ -2.23
NKX6-3A6NJ46 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
NKX6-3A6NJ46 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
NKX6-3A6NJ46 MIR136-201ENST00000385207 82 ntBASIC1.1□□□□□ -2.23
NKX6-3A6NJ46 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.1□□□□□ -2.23
NKX6-3A6NJ46 SNORD72-201ENST00000390994 80 ntBASIC1.1□□□□□ -2.23
NKX6-3A6NJ46 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.1□□□□□ -2.23
NKX6-3A6NJ46 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms