Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 SNORA72-201ENST00000384339 132 ntBASIC0.43□□□□□ -2.34
CLRN2A0PK11 MIR570-201ENST00000384917 97 ntBASIC0.43□□□□□ -2.34
CLRN2A0PK11 MIR1277-201ENST00000408536 78 ntBASIC0.43□□□□□ -2.34
CLRN2A0PK11 RNU6-1156P-201ENST00000410365 100 ntBASIC0.43□□□□□ -2.34
CLRN2A0PK11 AL589823.1-201ENST00000429577 183 ntBASIC0.43□□□□□ -2.34
CLRN2A0PK11 MTND1P4-201ENST00000435196 415 ntBASIC0.43□□□□□ -2.34
CLRN2A0PK11 RPL30P15-201ENST00000457129 321 ntBASIC0.43□□□□□ -2.34
CLRN2A0PK11 PRDX4P1-201ENST00000507189 574 ntBASIC0.43□□□□□ -2.34
CLRN2A0PK11 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.43□□□□□ -2.34
CLRN2A0PK11 MIR548AR-201ENST00000582191 57 ntBASIC0.43□□□□□ -2.34
CLRN2A0PK11 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.43□□□□□ -2.34
CLRN2A0PK11 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.42□□□□□ -2.34
CLRN2A0PK11 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.42□□□□□ -2.34
CLRN2A0PK11 RNY1P8-201ENST00000383970 114 ntBASIC0.42□□□□□ -2.34
CLRN2A0PK11 Y_RNA.412-201ENST00000384001 104 ntBASIC0.42□□□□□ -2.34
CLRN2A0PK11 Y_RNA.446-201ENST00000384178 104 ntBASIC0.42□□□□□ -2.34
CLRN2A0PK11 SNORD38C-201ENST00000384381 69 ntBASIC0.42□□□□□ -2.34
CLRN2A0PK11 RNU6-1215P-201ENST00000384441 102 ntBASIC0.42□□□□□ -2.34
CLRN2A0PK11 SNORD28B-201ENST00000390993 75 ntBASIC0.42□□□□□ -2.34
CLRN2A0PK11 MIR1827-201ENST00000408549 66 ntBASIC0.42□□□□□ -2.34
CLRN2A0PK11 MIR1302-7-201ENST00000408841 72 ntBASIC0.42□□□□□ -2.34
CLRN2A0PK11 Y_RNA.592-201ENST00000410274 109 ntBASIC0.42□□□□□ -2.34
CLRN2A0PK11 U8.19-201ENST00000459095 133 ntBASIC0.42□□□□□ -2.34
CLRN2A0PK11 HMGN1P10-201ENST00000474557 553 ntBASIC0.42□□□□□ -2.34
CLRN2A0PK11 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.42□□□□□ -2.34
CLRN2A0PK11 RN7SKP12-201ENST00000516275 143 ntBASIC0.42□□□□□ -2.34
CLRN2A0PK11 RNU6-1012P-201ENST00000516606 109 ntBASIC0.42□□□□□ -2.34
CLRN2A0PK11 RBM11P1-201ENST00000604951 799 ntBASIC0.42□□□□□ -2.34
CLRN2A0PK11 Y_RNA.318-201ENST00000365131 97 ntBASIC0.41□□□□□ -2.34
CLRN2A0PK11 Y_RNA.577-201ENST00000384794 101 ntBASIC0.41□□□□□ -2.34
CLRN2A0PK11 RNU6-192P-201ENST00000391253 100 ntBASIC0.41□□□□□ -2.34
CLRN2A0PK11 RNU6-855P-201ENST00000410395 104 ntBASIC0.41□□□□□ -2.34
CLRN2A0PK11 Y_RNA.605-201ENST00000410577 105 ntBASIC0.41□□□□□ -2.34
CLRN2A0PK11 RNU6-470P-201ENST00000515954 104 ntBASIC0.41□□□□□ -2.34
CLRN2A0PK11 RNU6-436P-201ENST00000516171 114 ntBASIC0.41□□□□□ -2.34
CLRN2A0PK11 AC011476.5-201ENST00000615594 130 ntBASIC0.41□□□□□ -2.34
CLRN2A0PK11 AL669831.3-213ENST00000636676 183 ntBASIC0.41□□□□□ -2.34
CLRN2A0PK11 Y_RNA.72-201ENST00000362894 103 ntBASIC0.4□□□□□ -2.35
CLRN2A0PK11 RNY3P11-201ENST00000364153 102 ntBASIC0.4□□□□□ -2.35
CLRN2A0PK11 RNU6-358P-201ENST00000516564 75 ntBASIC0.4□□□□□ -2.35
CLRN2A0PK11 MIR2115-201ENST00000516657 100 ntBASIC0.4□□□□□ -2.35
CLRN2A0PK11 RNY3P4-201ENST00000384428 101 ntBASIC0.39□□□□□ -2.35
CLRN2A0PK11 AC244023.1-201ENST00000426884 112 ntBASIC0.39□□□□□ -2.35
CLRN2A0PK11 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.39□□□□□ -2.35
CLRN2A0PK11 AC069439.1-201ENST00000494739 167 ntBASIC0.39□□□□□ -2.35
CLRN2A0PK11 RNU7-30P-201ENST00000516835 62 ntBASIC0.39□□□□□ -2.35
CLRN2A0PK11 AC144568.1-201ENST00000520139 137 ntBASIC0.39□□□□□ -2.35
CLRN2A0PK11 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
CLRN2A0PK11 AC242498.1-201ENST00000604134 111 ntBASIC0.39□□□□□ -2.35
CLRN2A0PK11 JPX_2.1-201ENST00000614161 69 ntBASIC0.39□□□□□ -2.35
CLRN2A0PK11 AC243994.1-201ENST00000618627 109 ntBASIC0.39□□□□□ -2.35
CLRN2A0PK11 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
CLRN2A0PK11 Y_RNA.6-201ENST00000362350 114 ntBASIC0.38□□□□□ -2.35
CLRN2A0PK11 Y_RNA.329-201ENST00000365209 107 ntBASIC0.38□□□□□ -2.35
CLRN2A0PK11 RNU6-396P-201ENST00000365369 105 ntBASIC0.38□□□□□ -2.35
CLRN2A0PK11 SNORD78.2-201ENST00000391076 69 ntBASIC0.38□□□□□ -2.35
CLRN2A0PK11 MTCO2P27-201ENST00000420740 428 ntBASIC0.38□□□□□ -2.35
CLRN2A0PK11 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.38□□□□□ -2.35
CLRN2A0PK11 MTCO2P12-201ENST00000427426 682 ntBASIC0.38□□□□□ -2.35
CLRN2A0PK11 RNU6-966P-201ENST00000516479 104 ntBASIC0.38□□□□□ -2.35
CLRN2A0PK11 Y_RNA.691-201ENST00000516611 103 ntBASIC0.38□□□□□ -2.35
CLRN2A0PK11 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.38□□□□□ -2.35
CLRN2A0PK11 POLR3GP1-201ENST00000594073 261 ntBASIC0.38□□□□□ -2.35
CLRN2A0PK11 AC104695.3-201ENST00000604052 296 ntBASIC0.38□□□□□ -2.35
CLRN2A0PK11 Y_RNA.146-201ENST00000363549 102 ntBASIC0.37□□□□□ -2.35
CLRN2A0PK11 RNU4-67P-201ENST00000364569 141 ntBASIC0.37□□□□□ -2.35
CLRN2A0PK11 RNU6-1323P-201ENST00000384025 107 ntBASIC0.37□□□□□ -2.35
CLRN2A0PK11 RNU6-35P-201ENST00000384530 107 ntBASIC0.37□□□□□ -2.35
CLRN2A0PK11 MIR628-201ENST00000385229 95 ntBASIC0.37□□□□□ -2.35
CLRN2A0PK11 RNU4-14P-201ENST00000410858 122 ntBASIC0.37□□□□□ -2.35
CLRN2A0PK11 RNU6-830P-201ENST00000516353 107 ntBASIC0.37□□□□□ -2.35
CLRN2A0PK11 RNA5SP476-201ENST00000516613 103 ntBASIC0.37□□□□□ -2.35
CLRN2A0PK11 RNU7-4P-201ENST00000516961 62 ntBASIC0.37□□□□□ -2.35
CLRN2A0PK11 MIR4659A-201ENST00000580269 81 ntBASIC0.37□□□□□ -2.35
CLRN2A0PK11 AC022441.3-201ENST00000605737 136 ntBASIC0.37□□□□□ -2.35
CLRN2A0PK11 Y_RNA.341-201ENST00000365341 102 ntBASIC0.36□□□□□ -2.35
CLRN2A0PK11 RNU6-442P-201ENST00000383968 104 ntBASIC0.36□□□□□ -2.35
CLRN2A0PK11 SNORA51.10-201ENST00000384418 136 ntBASIC0.36□□□□□ -2.35
CLRN2A0PK11 MIR140-201ENST00000385282 100 ntBASIC0.36□□□□□ -2.35
CLRN2A0PK11 SNORA75.6-201ENST00000391318 127 ntBASIC0.36□□□□□ -2.35
CLRN2A0PK11 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.36□□□□□ -2.35
CLRN2A0PK11 RNU6-613P-201ENST00000410412 108 ntBASIC0.36□□□□□ -2.35
CLRN2A0PK11 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.36□□□□□ -2.35
CLRN2A0PK11 SNRPGP14-201ENST00000435400 219 ntBASIC0.36□□□□□ -2.35
CLRN2A0PK11 FGF7P6-202ENST00000451282 293 ntBASIC0.36□□□□□ -2.35
CLRN2A0PK11 MTND4P17-201ENST00000470444 350 ntBASIC0.36□□□□□ -2.35
CLRN2A0PK11 RNA5SP285-201ENST00000516619 119 ntBASIC0.36□□□□□ -2.35
CLRN2A0PK11 AL355375.2-201ENST00000574825 175 ntBASIC0.36□□□□□ -2.35
CLRN2A0PK11 AL162730.1-201ENST00000605734 292 ntBASIC0.36□□□□□ -2.35
CLRN2A0PK11 AC093783.1-201ENST00000612976 329 ntBASIC0.36□□□□□ -2.35
CLRN2A0PK11 Pinc.1-201ENST00000616452 154 ntBASIC0.36□□□□□ -2.35
CLRN2A0PK11 Y_RNA.166-201ENST00000363730 102 ntBASIC0.35□□□□□ -2.35
CLRN2A0PK11 Y_RNA.230-201ENST00000364348 109 ntBASIC0.35□□□□□ -2.35
CLRN2A0PK11 Y_RNA.310-201ENST00000365063 113 ntBASIC0.35□□□□□ -2.35
CLRN2A0PK11 MIR520F-201ENST00000384824 87 ntBASIC0.35□□□□□ -2.35
CLRN2A0PK11 MIR520H-201ENST00000385126 88 ntBASIC0.35□□□□□ -2.35
CLRN2A0PK11 RNU6-710P-201ENST00000410424 105 ntBASIC0.35□□□□□ -2.35
CLRN2A0PK11 MTND1P34-201ENST00000438556 671 ntBASIC0.35□□□□□ -2.35
CLRN2A0PK11 RPL23AP54-201ENST00000495129 419 ntBASIC0.35□□□□□ -2.35
CLRN2A0PK11 RNU6-977P-201ENST00000516411 103 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms